RNA–Protein interactions for RNA: ENST00000558212.5

TRPM1-206, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-206ENST00000558212 MBD5Q9P267 1494 aa10.49□□□□□ -0.73
TRPM1-206ENST00000558212 KIF3BO15066 747 aa10.49□□□□□ -0.73
TRPM1-206ENST00000558212 CLK2P49760 499 aaKnown RBP10.49□□□□□ -0.73
TRPM1-206ENST00000558212 EMP3P54852 163 aa10.49□□□□□ -0.73
TRPM1-206ENST00000558212 TUSC1Q2TAM9 212 aa10.49□□□□□ -0.73
TRPM1-206ENST00000558212 PROCA1Q8NCQ7 364 aaPredicted RBP10.49□□□□□ -0.73
TRPM1-206ENST00000558212 SPIRE2Q8WWL2 714 aa10.49□□□□□ -0.73
TRPM1-206ENST00000558212 ZC3H13Q5T200 1668 aaKnown RBP10.49□□□□□ -0.73
TRPM1-206ENST00000558212 FAM135BQ49AJ0 1406 aa10.49□□□□□ -0.73
TRPM1-206ENST00000558212 GJA5P36382 358 aa10.47□□□□□ -0.73
TRPM1-206ENST00000558212 MARVELD3Q96A59 401 aa10.47□□□□□ -0.73
TRPM1-206ENST00000558212 ZMYND15Q9H091 742 aa10.47□□□□□ -0.73
TRPM1-206ENST00000558212 VPS9D1Q9Y2B5 631 aa10.47□□□□□ -0.73
TRPM1-206ENST00000558212 AXIN2Q9Y2T1 843 aa10.47□□□□□ -0.73
TRPM1-206ENST00000558212 SETD1AO15047 1707 aaKnown RBP10.47□□□□□ -0.73
TRPM1-206ENST00000558212 XIRP1Q702N8 1843 aaKnown RBP10.47□□□□□ -0.73
TRPM1-206ENST00000558212 DDX11L8A8MPP1 907 aa10.46□□□□□ -0.73
TRPM1-206ENST00000558212 LCE2DQ5TA82 110 aaPredicted RBP10.46□□□□□ -0.73
TRPM1-206ENST00000558212 POLR3EQ9NVU0 708 aa10.46□□□□□ -0.73
TRPM1-206ENST00000558212 TIAM1Q13009 1591 aa10.46□□□□□ -0.74
TRPM1-206ENST00000558212 CCDC141Q6ZP82 1450 aa10.45□□□□□ -0.74
TRPM1-206ENST00000558212 SCAF11Q99590 1463 aaKnown RBP10.45□□□□□ -0.74
TRPM1-206ENST00000558212 MTUS2Q5JR59 1369 aa10.45□□□□□ -0.74
TRPM1-206ENST00000558212 ZNF644Q9H582 1327 aaPredicted RBP10.45□□□□□ -0.74
TRPM1-206ENST00000558212 POTEB3A0JP26 581 aa10.45□□□□□ -0.74
TRPM1-206ENST00000558212 BHMG1C9JSJ3 638 aaPredicted RBP10.45□□□□□ -0.74
TRPM1-206ENST00000558212 POTEBQ6S5H4 581 aa10.45□□□□□ -0.74
TRPM1-206ENST00000558212 LIMD1Q9UGP4 676 aa10.45□□□□□ -0.74
TRPM1-206ENST00000558212 SPTLC1O15269 473 aa10.44□□□□□ -0.74
TRPM1-206ENST00000558212 FAM98CQ17RN3 349 aaKnown RBP10.44□□□□□ -0.74
TRPM1-206ENST00000558212 PPP2R2DQ66LE6 453 aa10.44□□□□□ -0.74
TRPM1-206ENST00000558212 ERVK-7P63135 1459 aa10.43□□□□□ -0.74
TRPM1-206ENST00000558212 FAM205CA6NFA0 338 aa10.43□□□□□ -0.74
TRPM1-206ENST00000558212 TK2O00142 265 aa10.43□□□□□ -0.74
TRPM1-206ENST00000558212 SLC10A3P09131 477 aa10.43□□□□□ -0.74
TRPM1-206ENST00000558212 MCM6Q14566 821 aa10.43□□□□□ -0.74
TRPM1-206ENST00000558212 RSBN1LQ6PCB5 846 aaPredicted RBP10.43□□□□□ -0.74
TRPM1-206ENST00000558212 LAPTM4BQ86VI4 370 aa10.43□□□□□ -0.74
TRPM1-206ENST00000558212 UBR1Q8IWV7 1749 aa10.43□□□□□ -0.74
TRPM1-206ENST00000558212 ABCC3O15438 1527 aa10.43□□□□□ -0.74
TRPM1-206ENST00000558212 SLIT1O75093 1534 aa10.43□□□□□ -0.74
TRPM1-206ENST00000558212 LRRC9Q6ZRR7 1453 aa10.42□□□□□ -0.74
TRPM1-206ENST00000558212 ARHGAP23Q9P227 1491 aa10.42□□□□□ -0.74
TRPM1-206ENST00000558212 ROBO1Q9Y6N7 1651 aa10.42□□□□□ -0.74
TRPM1-206ENST00000558212 GCGRP47871 477 aa10.42□□□□□ -0.74
TRPM1-206ENST00000558212 SWT1Q5T5J6 900 aaKnown RBP10.42□□□□□ -0.74
TRPM1-206ENST00000558212 RIC3Q7Z5B4 369 aa10.42□□□□□ -0.74
TRPM1-206ENST00000558212 HS3ST6Q96QI5 342 aa10.42□□□□□ -0.74
TRPM1-206ENST00000558212 SEPT9Q9UHD8 586 aaPredicted RBP10.42□□□□□ -0.74
TRPM1-206ENST00000558212 RSPH4AQ5TD94 716 aa10.41□□□□□ -0.74
TRPM1-206ENST00000558212 EHBP1L1Q8N3D4 1523 aa10.41□□□□□ -0.74
TRPM1-206ENST00000558212 NCOA2Q15596 1464 aa10.41□□□□□ -0.74
TRPM1-206ENST00000558212 MOXD2PA6NHM9 499 aa10.4□□□□□ -0.74
TRPM1-206ENST00000558212 NUTM1Q86Y26 1132 aa10.4□□□□□ -0.74
TRPM1-206ENST00000558212 CEP162Q5TB80 1403 aa10.4□□□□□ -0.75
TRPM1-206ENST00000558212 TMEM94Q12767 1356 aa10.39□□□□□ -0.75
TRPM1-206ENST00000558212 SRCAPQ6ZRS2 3230 aa10.39□□□□□ -0.75
TRPM1-206ENST00000558212 CAMSAP2Q08AD1 1489 aa10.39□□□□□ -0.75
TRPM1-206ENST00000558212 KDM4AO75164 1064 aa10.39□□□□□ -0.75
TRPM1-206ENST00000558212 LTKP29376 864 aa10.39□□□□□ -0.75
TRPM1-206ENST00000558212 RFC5P40937 340 aa10.39□□□□□ -0.75
TRPM1-206ENST00000558212 USP46P62068 366 aa10.39□□□□□ -0.75
TRPM1-206ENST00000558212 JCADQ9P266 1359 aa10.39□□□□□ -0.75
TRPM1-206ENST00000558212 MAP3K1Q13233 1512 aa10.38□□□□□ -0.75
TRPM1-206ENST00000558212 EIF2AK4Q9P2K8 1649 aaKnown RBP10.38□□□□□ -0.75
TRPM1-206ENST00000558212 TXNDC2Q86VQ3 553 aa10.38□□□□□ -0.75
TRPM1-206ENST00000558212 RDH13Q8NBN7 331 aa10.38□□□□□ -0.75
TRPM1-206ENST00000558212 NBPF3Q9H094 633 aa10.38□□□□□ -0.75
TRPM1-206ENST00000558212 EID1Q9Y6B2 187 aa10.38□□□□□ -0.75
TRPM1-206ENST00000558212 ARHGEF5Q12774 1597 aa10.38□□□□□ -0.75
TRPM1-206ENST00000558212 HOXA2O43364 376 aa10.37□□□□□ -0.75
TRPM1-206ENST00000558212 PHLPP1O60346 1717 aa10.37□□□□□ -0.75
TRPM1-206ENST00000558212 LILRB3O75022 631 aa10.37□□□□□ -0.75
TRPM1-206ENST00000558212 BANK1Q8NDB2 785 aa10.37□□□□□ -0.75
TRPM1-206ENST00000558212 A6NJR5 290 aa10.36□□□□□ -0.75
TRPM1-206ENST00000558212 HRO43593 1189 aa10.36□□□□□ -0.75
TRPM1-206ENST00000558212 MROH1Q8NDA8 1641 aa10.36□□□□□ -0.75
TRPM1-206ENST00000558212 NKTRP30414 1462 aaKnown RBP10.36□□□□□ -0.75
TRPM1-206ENST00000558212 PRDM15P57071 1507 aaPredicted RBP10.35□□□□□ -0.75
TRPM1-206ENST00000558212 SPDYE5A6NIY4 337 aa10.35□□□□□ -0.75
TRPM1-206ENST00000558212 TSPY4P0CV99 314 aa10.35□□□□□ -0.75
TRPM1-206ENST00000558212 TSPY10P0CW01 314 aa10.35□□□□□ -0.75
TRPM1-206ENST00000558212 KCNA6P17658 529 aa10.35□□□□□ -0.75
TRPM1-206ENST00000558212 NDUFV2P19404 249 aa10.35□□□□□ -0.75
TRPM1-206ENST00000558212 PRPF38BQ5VTL8 546 aaKnown RBP10.35□□□□□ -0.75
TRPM1-206ENST00000558212 ZNF772Q68DY9 489 aaPredicted RBP10.35□□□□□ -0.75
TRPM1-206ENST00000558212 SAMD7Q7Z3H4 446 aa10.35□□□□□ -0.75
TRPM1-206ENST00000558212 SLF2Q8IX21 1173 aa10.35□□□□□ -0.75
TRPM1-206ENST00000558212 FAM163AQ96GL9 167 aaPredicted RBP10.35□□□□□ -0.75
TRPM1-206ENST00000558212 TMEM2Q9UHN6 1383 aa10.35□□□□□ -0.75
TRPM1-206ENST00000558212 CEP152O94986 1710 aa10.35□□□□□ -0.75
TRPM1-206ENST00000558212 CFAP65Q6ZU64 1925 aaKnown RBP10.35□□□□□ -0.75
TRPM1-206ENST00000558212 LSM11P83369 360 aaKnown RBP eCLIP10.34□□□□□ -0.75
TRPM1-206ENST00000558212 QPCTQ16769 361 aa10.34□□□□□ -0.75
TRPM1-206ENST00000558212 ADGRD1Q6QNK2 874 aa10.34□□□□□ -0.75
TRPM1-206ENST00000558212 PCDHB15Q9Y5E8 787 aa10.34□□□□□ -0.75
TRPM1-206ENST00000558212 NWD1Q149M9 1564 aa10.34□□□□□ -0.75
TRPM1-206ENST00000558212 MAST1Q9Y2H9 1570 aa10.34□□□□□ -0.75
TRPM1-206ENST00000558212 SPATA31A6Q5VVP1 1343 aa10.33□□□□□ -0.76
TRPM1-206ENST00000558212 ARHGAP31Q2M1Z3 1444 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms