RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 PSME1Q06323 249 aa18.78■□□□□ 0.6
IFT43-209ENST00000555305 FANCIQ9NVI1 1328 aa18.77■□□□□ 0.6
IFT43-209ENST00000555305 AMPHP49418 695 aa18.77■□□□□ 0.6
IFT43-209ENST00000555305 MS4A1P11836 297 aa18.76■□□□□ 0.59
IFT43-209ENST00000555305 RARSP54136 660 aaKnown RBP18.76■□□□□ 0.59
IFT43-209ENST00000555305 KCNH5Q8NCM2 988 aa18.76■□□□□ 0.59
IFT43-209ENST00000555305 CRBNQ96SW2 442 aa18.76■□□□□ 0.59
IFT43-209ENST00000555305 PAK3O75914 559 aaPredicted RBP18.76■□□□□ 0.59
IFT43-209ENST00000555305 CANXP27824 592 aaKnown RBP18.76■□□□□ 0.59
IFT43-209ENST00000555305 KIF1AQ12756 1690 aa18.75■□□□□ 0.59
IFT43-209ENST00000555305 TSHZ2Q9NRE2 1034 aa18.75■□□□□ 0.59
IFT43-209ENST00000555305 PEAK1Q9H792 1746 aa18.74■□□□□ 0.59
IFT43-209ENST00000555305 GNAI1P63096 354 aa18.74■□□□□ 0.59
IFT43-209ENST00000555305 HSP90AB2PQ58FF8 381 aa18.74■□□□□ 0.59
IFT43-209ENST00000555305 RGPD1P0DJD0 1748 aa18.74■□□□□ 0.59
IFT43-209ENST00000555305 BCAR3O75815 825 aa18.73■□□□□ 0.59
IFT43-209ENST00000555305 PHACTR3Q96KR7 559 aa18.73■□□□□ 0.59
IFT43-209ENST00000555305 IFT57Q9NWB7 429 aa18.73■□□□□ 0.59
IFT43-209ENST00000555305 MYT1Q01538 1121 aa18.73■□□□□ 0.59
IFT43-209ENST00000555305 SULT6B1Q6IMI4 303 aa18.73■□□□□ 0.59
IFT43-209ENST00000555305 ATF3P18847 181 aa18.72■□□□□ 0.59
IFT43-209ENST00000555305 KDRP35968 1356 aa18.72■□□□□ 0.59
IFT43-209ENST00000555305 C1orf167Q5SNV9 1468 aa18.71■□□□□ 0.59
IFT43-209ENST00000555305 IGSF1Q8N6C5 1336 aa18.7■□□□□ 0.58
IFT43-209ENST00000555305 MST1RQ04912 1400 aa18.7■□□□□ 0.58
IFT43-209ENST00000555305 HAP1P54257 671 aaPredicted RBP18.7■□□□□ 0.58
IFT43-209ENST00000555305 C20orf194Q5TEA3 1177 aa18.7■□□□□ 0.58
IFT43-209ENST00000555305 RBM33Q96EV2 1170 aaKnown RBP18.7■□□□□ 0.58
IFT43-209ENST00000555305 SOX12O15370 315 aa18.69■□□□□ 0.58
IFT43-209ENST00000555305 HOXC9P31274 260 aa18.69■□□□□ 0.58
IFT43-209ENST00000555305 ALDH1L2Q3SY69 923 aa18.69■□□□□ 0.58
IFT43-209ENST00000555305 CADPS2Q86UW7 1296 aa18.69■□□□□ 0.58
IFT43-209ENST00000555305 TMEM94Q12767 1356 aa18.69■□□□□ 0.58
IFT43-209ENST00000555305 MARF1Q9Y4F3 1742 aaKnown RBP18.69■□□□□ 0.58
IFT43-209ENST00000555305 EXOSC9Q06265 439 aaKnown RBP18.68■□□□□ 0.58
IFT43-209ENST00000555305 TSR2Q969E8 191 aaKnown RBP18.68■□□□□ 0.58
IFT43-209ENST00000555305 CFAP44Q96MT7 982 aa18.68■□□□□ 0.58
IFT43-209ENST00000555305 KIF16BQ96L93 1317 aa18.67■□□□□ 0.58
IFT43-209ENST00000555305 ZNF853P0CG23 659 aa18.67■□□□□ 0.58
IFT43-209ENST00000555305 LMTK3Q96Q04 1460 aa18.66■□□□□ 0.58
IFT43-209ENST00000555305 IPO8O15397 1037 aaKnown RBP18.66■□□□□ 0.58
IFT43-209ENST00000555305 ZKSCAN2Q63HK3 967 aa18.66■□□□□ 0.58
IFT43-209ENST00000555305 CENPQQ7L2Z9 268 aaPredicted RBP18.66■□□□□ 0.58
IFT43-209ENST00000555305 GAS2L2Q8NHY3 880 aa18.66■□□□□ 0.58
IFT43-209ENST00000555305 ORAI2Q96SN7 254 aa18.66■□□□□ 0.58
IFT43-209ENST00000555305 PHRF1Q9P1Y6 1649 aaKnown RBP18.66■□□□□ 0.58
IFT43-209ENST00000555305 MSH6P52701 1360 aa18.66■□□□□ 0.58
IFT43-209ENST00000555305 BRPF1P55201 1214 aaPredicted RBP18.65■□□□□ 0.58
IFT43-209ENST00000555305 IP6K1Q92551 441 aa18.65■□□□□ 0.58
IFT43-209ENST00000555305 NFAT5O94916 1531 aa18.65■□□□□ 0.58
IFT43-209ENST00000555305 FOXO3O43524 673 aa18.65■□□□□ 0.58
IFT43-209ENST00000555305 HTATSF1O43719 755 aaKnown RBP18.65■□□□□ 0.58
IFT43-209ENST00000555305 AEBP1Q8IUX7 1158 aa18.65■□□□□ 0.58
IFT43-209ENST00000555305 FRAT1Q92837 279 aaPredicted RBP18.65■□□□□ 0.58
IFT43-209ENST00000555305 SMC4Q9NTJ3 1288 aa18.65■□□□□ 0.58
IFT43-209ENST00000555305 SLIT3O75094 1523 aa18.64■□□□□ 0.57
IFT43-209ENST00000555305 KDM4FA0A1W2PPD8 638 aa18.64■□□□□ 0.57
IFT43-209ENST00000555305 NUTM2GQ5VZR2 741 aa18.64■□□□□ 0.57
IFT43-209ENST00000555305 KRT28Q7Z3Y7 464 aa18.63■□□□□ 0.57
IFT43-209ENST00000555305 EYA1Q99502 592 aa18.63■□□□□ 0.57
IFT43-209ENST00000555305 USP19O94966 1318 aa18.62■□□□□ 0.57
IFT43-209ENST00000555305 RTF1Q92541 710 aaKnown RBP18.62■□□□□ 0.57
IFT43-209ENST00000555305 HSPA2P54652 639 aa18.61■□□□□ 0.57
IFT43-209ENST00000555305 FTSJ3Q8IY81 847 aaKnown RBP18.61■□□□□ 0.57
IFT43-209ENST00000555305 LAS1LQ9Y4W2 734 aaKnown RBP18.61■□□□□ 0.57
IFT43-209ENST00000555305 TRPM3Q9HCF6 1732 aaPredicted RBP18.61■□□□□ 0.57
IFT43-209ENST00000555305 NPHP3Q7Z494 1330 aa18.61■□□□□ 0.57
IFT43-209ENST00000555305 TCERG1O14776 1098 aaKnown RBP18.6■□□□□ 0.57
IFT43-209ENST00000555305 DZIP1LQ8IYY4 767 aaKnown RBP18.6■□□□□ 0.57
IFT43-209ENST00000555305 SSH1Q8WYL5 1049 aa18.6■□□□□ 0.57
IFT43-209ENST00000555305 CLUAP1Q96AJ1 413 aa18.6■□□□□ 0.57
IFT43-209ENST00000555305 MBIPQ9NS73 344 aa18.6■□□□□ 0.57
IFT43-209ENST00000555305 KDM2BQ8NHM5 1336 aa18.59■□□□□ 0.57
IFT43-209ENST00000555305 GCP02774 474 aa18.59■□□□□ 0.57
IFT43-209ENST00000555305 CHMP4BQ9H444 224 aaKnown RBP18.59■□□□□ 0.57
IFT43-209ENST00000555305 DLG5Q8TDM6 1919 aa18.59■□□□□ 0.57
IFT43-209ENST00000555305 STRCP1A6NGW2 1772 aa18.59■□□□□ 0.57
IFT43-209ENST00000555305 LTN1O94822 1766 aa18.59■□□□□ 0.57
IFT43-209ENST00000555305 ATF7IPQ6VMQ6 1270 aa18.58■□□□□ 0.57
IFT43-209ENST00000555305 ARHGAP45Q92619 1136 aa18.58■□□□□ 0.57
IFT43-209ENST00000555305 KIAA0232Q92628 1395 aa18.58■□□□□ 0.56
IFT43-209ENST00000555305 ARHGEF25Q86VW2 580 aa18.58■□□□□ 0.56
IFT43-209ENST00000555305 CHL1O00533 1208 aa18.57■□□□□ 0.56
IFT43-209ENST00000555305 MVPQ14764 893 aaKnown RBP18.57■□□□□ 0.56
IFT43-209ENST00000555305 PANK1Q8TE04 598 aa18.57■□□□□ 0.56
IFT43-209ENST00000555305 BCL2L13Q9BXK5 485 aa18.57■□□□□ 0.56
IFT43-209ENST00000555305 COG6Q9Y2V7 657 aa18.57■□□□□ 0.56
IFT43-209ENST00000555305 VAMP4O75379 141 aa18.56■□□□□ 0.56
IFT43-209ENST00000555305 MTHFSDQ2M296 383 aaKnown RBP18.56■□□□□ 0.56
IFT43-209ENST00000555305 THUMPD2Q9BTF0 503 aaKnown RBP18.56■□□□□ 0.56
IFT43-209ENST00000555305 BABAM1Q9NWV8 329 aa18.56■□□□□ 0.56
IFT43-209ENST00000555305 DDX19BQ9UMR2 479 aa18.56■□□□□ 0.56
IFT43-209ENST00000555305 TWISTNBQ3B726 338 aaPredicted RBP18.55■□□□□ 0.56
IFT43-209ENST00000555305 RBM19Q9Y4C8 960 aaKnown RBP18.55■□□□□ 0.56
IFT43-209ENST00000555305 FAM83GA6ND36 823 aa18.55■□□□□ 0.56
IFT43-209ENST00000555305 STRCQ7RTU9 1775 aa18.54■□□□□ 0.56
IFT43-209ENST00000555305 GNAT3A8MTJ3 354 aa18.54■□□□□ 0.56
IFT43-209ENST00000555305 ALS2Q96Q42 1657 aa18.54■□□□□ 0.56
IFT43-209ENST00000555305 TRIM27P14373 513 aa18.53■□□□□ 0.56
IFT43-209ENST00000555305 LMOD2Q6P5Q4 547 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms