RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 THEMISQ8N1K5 641 aaPredicted RBP18.96■□□□□ 0.63
XRCC3-211ENST00000555055 IL27Q8NEV9 243 aa18.96■□□□□ 0.63
XRCC3-211ENST00000555055 ZNF692Q9BU19 519 aaPredicted RBP18.96■□□□□ 0.63
XRCC3-211ENST00000555055 EIF4A2Q14240 407 aaKnown RBP18.95■□□□□ 0.62
XRCC3-211ENST00000555055 ITPRIPQ8IWB1 547 aa18.95■□□□□ 0.62
XRCC3-211ENST00000555055 DZIP1LQ8IYY4 767 aaKnown RBP18.95■□□□□ 0.62
XRCC3-211ENST00000555055 NGDNQ8NEJ9 315 aaKnown RBP18.95■□□□□ 0.62
XRCC3-211ENST00000555055 C8orf34Q49A92 452 aa18.95■□□□□ 0.62
XRCC3-211ENST00000555055 SLC4A3P48751 1232 aa18.94■□□□□ 0.62
XRCC3-211ENST00000555055 MON2Q7Z3U7 1717 aa18.94■□□□□ 0.62
XRCC3-211ENST00000555055 MVPQ14764 893 aaKnown RBP18.93■□□□□ 0.62
XRCC3-211ENST00000555055 ITSN1Q15811 1721 aa18.93■□□□□ 0.62
XRCC3-211ENST00000555055 PNNQ9H307 717 aaKnown RBP18.93■□□□□ 0.62
XRCC3-211ENST00000555055 TMEM57Q8N5G2 664 aa18.92■□□□□ 0.62
XRCC3-211ENST00000555055 RGPD8O14715 1765 aaPredicted RBP18.92■□□□□ 0.62
XRCC3-211ENST00000555055 USP6P35125 1406 aa18.92■□□□□ 0.62
XRCC3-211ENST00000555055 KRT24Q2M2I5 525 aa18.91■□□□□ 0.62
XRCC3-211ENST00000555055 MBIPQ9NS73 344 aa18.91■□□□□ 0.62
XRCC3-211ENST00000555055 TBX22Q9Y458 520 aa18.91■□□□□ 0.62
XRCC3-211ENST00000555055 AKAP12Q02952 1782 aa18.91■□□□□ 0.62
XRCC3-211ENST00000555055 PLEKHG3A1L390 1219 aa18.91■□□□□ 0.62
XRCC3-211ENST00000555055 CDK12Q9NYV4 1490 aaPredicted RBP18.91■□□□□ 0.62
XRCC3-211ENST00000555055 ATF7IPQ6VMQ6 1270 aa18.9■□□□□ 0.62
XRCC3-211ENST00000555055 MCM10Q7L590 875 aa18.9■□□□□ 0.62
XRCC3-211ENST00000555055 AATKQ6ZMQ8 1374 aa18.9■□□□□ 0.62
XRCC3-211ENST00000555055 C14orf37Q86TY3 774 aa18.9■□□□□ 0.62
XRCC3-211ENST00000555055 GSE1Q14687 1217 aa18.89■□□□□ 0.62
XRCC3-211ENST00000555055 FAM161AQ3B820 660 aa18.89■□□□□ 0.62
XRCC3-211ENST00000555055 FOXO3O43524 673 aa18.88■□□□□ 0.61
XRCC3-211ENST00000555055 C8orf58Q8NAV2 365 aa18.88■□□□□ 0.61
XRCC3-211ENST00000555055 IL16Q14005 1332 aa18.88■□□□□ 0.61
XRCC3-211ENST00000555055 ARHGAP23Q9P227 1491 aa18.88■□□□□ 0.61
XRCC3-211ENST00000555055 MAP3K19Q56UN5 1328 aa18.88■□□□□ 0.61
XRCC3-211ENST00000555055 SLIT1O75093 1534 aa18.88■□□□□ 0.61
XRCC3-211ENST00000555055 NCBP3Q53F19 620 aaKnown RBP18.88■□□□□ 0.61
XRCC3-211ENST00000555055 MIS18AQ9NYP9 233 aa18.88■□□□□ 0.61
XRCC3-211ENST00000555055 PDZRN3Q9UPQ7 1066 aa18.88■□□□□ 0.61
XRCC3-211ENST00000555055 SEC24BO95487 1268 aa18.87■□□□□ 0.61
XRCC3-211ENST00000555055 C1orf115Q9H7X2 142 aa18.87■□□□□ 0.61
XRCC3-211ENST00000555055 OVOS2A0A0J9YW53 1432 aa18.86■□□□□ 0.61
XRCC3-211ENST00000555055 OVOS2Q6IE36 1432 aa18.86■□□□□ 0.61
XRCC3-211ENST00000555055 VAMP4O75379 141 aa18.86■□□□□ 0.61
XRCC3-211ENST00000555055 NLRP6P59044 892 aa18.86■□□□□ 0.61
XRCC3-211ENST00000555055 LTV1Q96GA3 475 aaPredicted RBP18.86■□□□□ 0.61
XRCC3-211ENST00000555055 DLG5Q8TDM6 1919 aa18.84■□□□□ 0.61
XRCC3-211ENST00000555055 PEAK1Q9H792 1746 aa18.84■□□□□ 0.61
XRCC3-211ENST00000555055 NFKBIBQ15653 356 aa18.84■□□□□ 0.61
XRCC3-211ENST00000555055 DIP2AQ14689 1571 aa18.84■□□□□ 0.61
XRCC3-211ENST00000555055 TOPAZ1Q8N9V7 1692 aa18.83■□□□□ 0.61
XRCC3-211ENST00000555055 NRKQ7Z2Y5 1582 aa18.83■□□□□ 0.61
XRCC3-211ENST00000555055 ZBTB7CA1YPR0 619 aa18.83■□□□□ 0.6
XRCC3-211ENST00000555055 CT47B1P0C2W7 299 aaPredicted RBP18.83■□□□□ 0.6
XRCC3-211ENST00000555055 TWISTNBQ3B726 338 aaPredicted RBP18.83■□□□□ 0.6
XRCC3-211ENST00000555055 RIMS1Q86UR5 1692 aaKnown RBP18.83■□□□□ 0.6
XRCC3-211ENST00000555055 AMPHP49418 695 aa18.83■□□□□ 0.6
XRCC3-211ENST00000555055 GNAI1P63096 354 aa18.82■□□□□ 0.6
XRCC3-211ENST00000555055 XPCQ01831 940 aaPredicted RBP18.82■□□□□ 0.6
XRCC3-211ENST00000555055 RWDD1Q9H446 243 aaPredicted RBP18.81■□□□□ 0.6
XRCC3-211ENST00000555055 IFT57Q9NWB7 429 aa18.81■□□□□ 0.6
XRCC3-211ENST00000555055 ZNF853P0CG23 659 aa18.81■□□□□ 0.6
XRCC3-211ENST00000555055 ABTB2Q8N961 1025 aa18.81■□□□□ 0.6
XRCC3-211ENST00000555055 CFAP44Q96MT7 982 aa18.81■□□□□ 0.6
XRCC3-211ENST00000555055 SSH2Q76I76 1423 aa18.8■□□□□ 0.6
XRCC3-211ENST00000555055 DDX19BQ9UMR2 479 aa18.8■□□□□ 0.6
XRCC3-211ENST00000555055 PTCH1Q13635 1447 aa18.8■□□□□ 0.6
XRCC3-211ENST00000555055 MRPL50Q8N5N7 158 aaKnown RBP18.8■□□□□ 0.6
XRCC3-211ENST00000555055 KIF16BQ96L93 1317 aa18.79■□□□□ 0.6
XRCC3-211ENST00000555055 CEP170BQ9Y4F5 1589 aaPredicted RBP18.79■□□□□ 0.6
XRCC3-211ENST00000555055 USHBP1Q8N6Y0 703 aa18.79■□□□□ 0.6
XRCC3-211ENST00000555055 MTHFSDQ2M296 383 aaKnown RBP18.78■□□□□ 0.6
XRCC3-211ENST00000555055 ANKLE2Q86XL3 938 aa18.78■□□□□ 0.6
XRCC3-211ENST00000555055 EYA1Q99502 592 aa18.78■□□□□ 0.6
XRCC3-211ENST00000555055 VIRMAQ69YN4 1812 aaKnown RBP18.78■□□□□ 0.6
XRCC3-211ENST00000555055 ZBTB40Q9NUA8 1239 aa18.78■□□□□ 0.6
XRCC3-211ENST00000555055 DAXXQ9UER7 740 aaPredicted RBP18.78■□□□□ 0.6
XRCC3-211ENST00000555055 ALDH1L2Q3SY69 923 aa18.77■□□□□ 0.6
XRCC3-211ENST00000555055 IPO8O15397 1037 aaKnown RBP18.77■□□□□ 0.59
XRCC3-211ENST00000555055 USP31Q70CQ4 1352 aa18.76■□□□□ 0.59
XRCC3-211ENST00000555055 ESCO1Q5FWF5 840 aa18.76■□□□□ 0.59
XRCC3-211ENST00000555055 CALD1Q05682 793 aaKnown RBP18.75■□□□□ 0.59
XRCC3-211ENST00000555055 SETD1BQ9UPS6 1966 aaKnown RBP18.75■□□□□ 0.59
XRCC3-211ENST00000555055 LMOD3Q0VAK6 560 aa18.75■□□□□ 0.59
XRCC3-211ENST00000555055 TTC21AQ8NDW8 1320 aa18.74■□□□□ 0.59
XRCC3-211ENST00000555055 RTN4Q9NQC3 1192 aaKnown RBP18.74■□□□□ 0.59
XRCC3-211ENST00000555055 PIK3C2AO00443 1686 aa18.74■□□□□ 0.59
XRCC3-211ENST00000555055 XRN1Q8IZH2 1706 aaKnown RBP18.73■□□□□ 0.59
XRCC3-211ENST00000555055 LMOD2Q6P5Q4 547 aa18.73■□□□□ 0.59
XRCC3-211ENST00000555055 LNPKQ9C0E8 428 aa18.73■□□□□ 0.59
XRCC3-211ENST00000555055 USP19O94966 1318 aa18.72■□□□□ 0.59
XRCC3-211ENST00000555055 FLT4P35916 1363 aa18.72■□□□□ 0.59
XRCC3-211ENST00000555055 NECTIN2Q92692 538 aa18.72■□□□□ 0.59
XRCC3-211ENST00000555055 PHF8Q9UPP1 1060 aa18.72■□□□□ 0.59
XRCC3-211ENST00000555055 ORAI2Q96SN7 254 aa18.72■□□□□ 0.59
XRCC3-211ENST00000555055 BRPF3Q9ULD4 1205 aa18.72■□□□□ 0.59
XRCC3-211ENST00000555055 ZBTB7BO15156 539 aaPredicted RBP18.71■□□□□ 0.59
XRCC3-211ENST00000555055 HOXC9P31274 260 aa18.71■□□□□ 0.59
XRCC3-211ENST00000555055 SBNO1A3KN83 1393 aa18.71■□□□□ 0.58
XRCC3-211ENST00000555055 NALCNQ8IZF0 1738 aa18.71■□□□□ 0.58
XRCC3-211ENST00000555055 UBE2Q2Q8WVN8 375 aa18.7■□□□□ 0.58
XRCC3-211ENST00000555055 CHL1O00533 1208 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms