RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 ATF7IPQ6VMQ6 1270 aa16.2■□□□□ 0.18
PPP4R3A-206ENST00000554943 SAFB2Q14151 953 aaKnown RBP eCLIP16.19■□□□□ 0.18
PPP4R3A-206ENST00000554943 ABCC4O15439 1325 aa16.19■□□□□ 0.18
PPP4R3A-206ENST00000554943 DZIP1LQ8IYY4 767 aaKnown RBP16.19■□□□□ 0.18
PPP4R3A-206ENST00000554943 NCOA3Q9Y6Q9 1424 aa16.19■□□□□ 0.18
PPP4R3A-206ENST00000554943 NFE2L2Q16236 605 aa16.18■□□□□ 0.18
PPP4R3A-206ENST00000554943 PHACTR3Q96KR7 559 aa16.18■□□□□ 0.18
PPP4R3A-206ENST00000554943 IFT57Q9NWB7 429 aa16.18■□□□□ 0.18
PPP4R3A-206ENST00000554943 CRB1P82279 1406 aa16.17■□□□□ 0.18
PPP4R3A-206ENST00000554943 KDRP35968 1356 aa16.17■□□□□ 0.18
PPP4R3A-206ENST00000554943 DEKP35659 375 aaKnown RBP16.17■□□□□ 0.18
PPP4R3A-206ENST00000554943 NUDT16Q96DE0 195 aaKnown RBP16.17■□□□□ 0.18
PPP4R3A-206ENST00000554943 ANTXR1Q9H6X2 564 aa16.17■□□□□ 0.18
PPP4R3A-206ENST00000554943 PDZRN3Q9UPQ7 1066 aa16.17■□□□□ 0.18
PPP4R3A-206ENST00000554943 LTN1O94822 1766 aa16.17■□□□□ 0.18
PPP4R3A-206ENST00000554943 ADAMTS7Q9UKP4 1686 aa16.17■□□□□ 0.18
PPP4R3A-206ENST00000554943 VAMP4O75379 141 aa16.17■□□□□ 0.18
PPP4R3A-206ENST00000554943 RIPK4P57078 832 aa16.17■□□□□ 0.18
PPP4R3A-206ENST00000554943 TBC1D32Q96NH3 1257 aa16.16■□□□□ 0.18
PPP4R3A-206ENST00000554943 ANKARQ7Z5J8 1434 aa16.16■□□□□ 0.18
PPP4R3A-206ENST00000554943 KDM3BQ7LBC6 1761 aa16.16■□□□□ 0.18
PPP4R3A-206ENST00000554943 MRPL50Q8N5N7 158 aaKnown RBP16.16■□□□□ 0.18
PPP4R3A-206ENST00000554943 CCDC61Q9Y6R9 512 aa16.16■□□□□ 0.18
PPP4R3A-206ENST00000554943 KIF16BQ96L93 1317 aa16.15■□□□□ 0.18
PPP4R3A-206ENST00000554943 PPM1GO15355 546 aaPredicted RBP16.15■□□□□ 0.18
PPP4R3A-206ENST00000554943 ZNF692Q9BU19 519 aaPredicted RBP16.15■□□□□ 0.18
PPP4R3A-206ENST00000554943 NEUROD2Q15784 382 aa16.14■□□□□ 0.17
PPP4R3A-206ENST00000554943 DDX19BQ9UMR2 479 aa16.14■□□□□ 0.17
PPP4R3A-206ENST00000554943 CEP170BQ9Y4F5 1589 aaPredicted RBP16.14■□□□□ 0.17
PPP4R3A-206ENST00000554943 LMO7Q8WWI1 1683 aa16.14■□□□□ 0.17
PPP4R3A-206ENST00000554943 NME9Q86XW9 330 aa16.14■□□□□ 0.17
PPP4R3A-206ENST00000554943 NOB1Q9ULX3 412 aaKnown RBP16.14■□□□□ 0.17
PPP4R3A-206ENST00000554943 SIPA1L3O60292 1781 aaPredicted RBP16.14■□□□□ 0.17
PPP4R3A-206ENST00000554943 RWDD1Q9H446 243 aaPredicted RBP16.13■□□□□ 0.17
PPP4R3A-206ENST00000554943 ADAMTSL3P82987 1691 aa16.13■□□□□ 0.17
PPP4R3A-206ENST00000554943 LMTK3Q96Q04 1460 aa16.13■□□□□ 0.17
PPP4R3A-206ENST00000554943 CRYBG1Q9Y4K1 1723 aa16.13■□□□□ 0.17
PPP4R3A-206ENST00000554943 ARHGEF10O15013 1369 aa16.13■□□□□ 0.17
PPP4R3A-206ENST00000554943 KIAA0232Q92628 1395 aa16.13■□□□□ 0.17
PPP4R3A-206ENST00000554943 ZBTB7BO15156 539 aaPredicted RBP16.13■□□□□ 0.17
PPP4R3A-206ENST00000554943 LTKP29376 864 aa16.13■□□□□ 0.17
PPP4R3A-206ENST00000554943 EMILIN1Q9Y6C2 1016 aa16.13■□□□□ 0.17
PPP4R3A-206ENST00000554943 PRKAR2BP31323 418 aa16.12■□□□□ 0.17
PPP4R3A-206ENST00000554943 SENP3Q9H4L4 574 aaPredicted RBP16.12■□□□□ 0.17
PPP4R3A-206ENST00000554943 NFAT5O94916 1531 aa16.12■□□□□ 0.17
PPP4R3A-206ENST00000554943 ATP10DQ9P241 1426 aa16.12■□□□□ 0.17
PPP4R3A-206ENST00000554943 ZRANB1Q9UGI0 708 aa16.12■□□□□ 0.17
PPP4R3A-206ENST00000554943 NUCB1Q02818 461 aa16.11■□□□□ 0.17
PPP4R3A-206ENST00000554943 TMEM57Q8N5G2 664 aa16.11■□□□□ 0.17
PPP4R3A-206ENST00000554943 TRPM3Q9HCF6 1732 aaPredicted RBP16.11■□□□□ 0.17
PPP4R3A-206ENST00000554943 FBLN1P23142 703 aa16.1■□□□□ 0.17
PPP4R3A-206ENST00000554943 FRAT1Q92837 279 aaPredicted RBP16.1■□□□□ 0.17
PPP4R3A-206ENST00000554943 CFAP44Q96MT7 982 aa16.1■□□□□ 0.17
PPP4R3A-206ENST00000554943 BCL2L13Q9BXK5 485 aa16.1■□□□□ 0.17
PPP4R3A-206ENST00000554943 TTC21BQ7Z4L5 1316 aa16.1■□□□□ 0.17
PPP4R3A-206ENST00000554943 NCKAP5LQ9HCH0 1330 aa16.1■□□□□ 0.17
PPP4R3A-206ENST00000554943 NCAPD2Q15021 1401 aa16.1■□□□□ 0.17
PPP4R3A-206ENST00000554943 DDIT3P35638 169 aa16.1■□□□□ 0.17
PPP4R3A-206ENST00000554943 RTN4Q9NQC3 1192 aaKnown RBP16.1■□□□□ 0.17
PPP4R3A-206ENST00000554943 RGS3P49796 1198 aa16.09■□□□□ 0.17
PPP4R3A-206ENST00000554943 TXNDC2Q86VQ3 553 aa16.09■□□□□ 0.17
PPP4R3A-206ENST00000554943 MBIPQ9NS73 344 aa16.09■□□□□ 0.17
PPP4R3A-206ENST00000554943 U2SURPO15042 1029 aaKnown RBP16.08■□□□□ 0.17
PPP4R3A-206ENST00000554943 SMC4Q9NTJ3 1288 aa16.08■□□□□ 0.17
PPP4R3A-206ENST00000554943 HDGFP51858 240 aaKnown RBP16.08■□□□□ 0.16
PPP4R3A-206ENST00000554943 SIRT2Q8IXJ6 389 aa16.07■□□□□ 0.16
PPP4R3A-206ENST00000554943 RTL1A6NKG5 1358 aa16.07■□□□□ 0.16
PPP4R3A-206ENST00000554943 TBX22Q9Y458 520 aa16.07■□□□□ 0.16
PPP4R3A-206ENST00000554943 MST1RQ04912 1400 aa16.07■□□□□ 0.16
PPP4R3A-206ENST00000554943 TSPYL6Q8N831 410 aa16.06■□□□□ 0.16
PPP4R3A-206ENST00000554943 TTC21AQ8NDW8 1320 aa16.06■□□□□ 0.16
PPP4R3A-206ENST00000554943 CALD1Q05682 793 aaKnown RBP16.06■□□□□ 0.16
PPP4R3A-206ENST00000554943 NFKBIBQ15653 356 aa16.06■□□□□ 0.16
PPP4R3A-206ENST00000554943 GNAI1P63096 354 aa16.06■□□□□ 0.16
PPP4R3A-206ENST00000554943 EIF4A2Q14240 407 aaKnown RBP16.05■□□□□ 0.16
PPP4R3A-206ENST00000554943 RGPD2P0DJD1 1756 aa16.05■□□□□ 0.16
PPP4R3A-206ENST00000554943 CHL1O00533 1208 aa16.05■□□□□ 0.16
PPP4R3A-206ENST00000554943 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.05■□□□□ 0.162e-6■■■□□ 14.9
PPP4R3A-206ENST00000554943 RBM25P49756 843 aaKnown RBP16.04■□□□□ 0.16
PPP4R3A-206ENST00000554943 ACEP12821 1306 aa16.04■□□□□ 0.16
PPP4R3A-206ENST00000554943 SBNO1A3KN83 1393 aa16.04■□□□□ 0.16
PPP4R3A-206ENST00000554943 IPO8O15397 1037 aaKnown RBP16.04■□□□□ 0.16
PPP4R3A-206ENST00000554943 SLIT3O75094 1523 aa16.03■□□□□ 0.16
PPP4R3A-206ENST00000554943 CANXP27824 592 aaKnown RBP16.03■□□□□ 0.16
PPP4R3A-206ENST00000554943 INTS3Q68E01 1043 aaKnown RBP16.03■□□□□ 0.16
PPP4R3A-206ENST00000554943 COG3Q96JB2 828 aa16.03■□□□□ 0.16
PPP4R3A-206ENST00000554943 STAG3Q9UJ98 1225 aa16.02■□□□□ 0.16
PPP4R3A-206ENST00000554943 LAS1LQ9Y4W2 734 aaKnown RBP16.02■□□□□ 0.15
PPP4R3A-206ENST00000554943 IGSF1Q8N6C5 1336 aa16.02■□□□□ 0.15
PPP4R3A-206ENST00000554943 PXDNLA1KZ92 1463 aa16.01■□□□□ 0.15
PPP4R3A-206ENST00000554943 C8orf58Q8NAV2 365 aa16.01■□□□□ 0.15
PPP4R3A-206ENST00000554943 LMOD3Q0VAK6 560 aa16.01■□□□□ 0.15
PPP4R3A-206ENST00000554943 NEFMP07197 916 aa16■□□□□ 0.15
PPP4R3A-206ENST00000554943 KIF2CQ99661 725 aa16■□□□□ 0.15
PPP4R3A-206ENST00000554943 FTSJ3Q8IY81 847 aaKnown RBP16■□□□□ 0.15
PPP4R3A-206ENST00000554943 SLC4A3P48751 1232 aa15.99■□□□□ 0.15
PPP4R3A-206ENST00000554943 BMP2KLQ5H9B9 411 aa15.99■□□□□ 0.15
PPP4R3A-206ENST00000554943 ALS2Q96Q42 1657 aa15.99■□□□□ 0.15
PPP4R3A-206ENST00000554943 RRS1Q15050 365 aaKnown RBP15.99■□□□□ 0.15
PPP4R3A-206ENST00000554943 GCC1Q96CN9 775 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms