RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 KIF2CQ99661 725 aa20.97■□□□□ 0.95
PPP4R3A-202ENST00000554390 PODXL2Q9NZ53 605 aa20.97■□□□□ 0.95
PPP4R3A-202ENST00000554390 GOLGA6L22H0YM25 854 aa20.97■□□□□ 0.95
PPP4R3A-202ENST00000554390 STAG3Q9UJ98 1225 aa20.97■□□□□ 0.95
PPP4R3A-202ENST00000554390 NUTM2FA1L443 756 aa20.96■□□□□ 0.95
PPP4R3A-202ENST00000554390 TERF2IPQ9NYB0 399 aa20.96■□□□□ 0.95
PPP4R3A-202ENST00000554390 KLHL40Q2TBA0 621 aa20.96■□□□□ 0.95
PPP4R3A-202ENST00000554390 OTUD7AQ8TE49 926 aaPredicted RBP20.96■□□□□ 0.95
PPP4R3A-202ENST00000554390 RPGRIP1LQ68CZ1 1315 aa20.95■□□□□ 0.94
PPP4R3A-202ENST00000554390 IPO8O15397 1037 aaKnown RBP20.95■□□□□ 0.94
PPP4R3A-202ENST00000554390 ZBTB7BO15156 539 aaPredicted RBP20.95■□□□□ 0.94
PPP4R3A-202ENST00000554390 C8orf58Q8NAV2 365 aa20.95■□□□□ 0.94
PPP4R3A-202ENST00000554390 GAS2L2Q8NHY3 880 aa20.95■□□□□ 0.94
PPP4R3A-202ENST00000554390 MAP7D2Q96T17 732 aa20.95■□□□□ 0.94
PPP4R3A-202ENST00000554390 ARHGEF28Q8N1W1 1705 aaKnown RBP20.95■□□□□ 0.94
PPP4R3A-202ENST00000554390 ABCC11Q96J66 1382 aa20.95■□□□□ 0.94
PPP4R3A-202ENST00000554390 POGZQ7Z3K3 1410 aa20.94■□□□□ 0.94
PPP4R3A-202ENST00000554390 POLKQ9UBT6 870 aa20.94■□□□□ 0.94
PPP4R3A-202ENST00000554390 ABCC3O15438 1527 aa20.94■□□□□ 0.94
PPP4R3A-202ENST00000554390 CAMSAP1Q5T5Y3 1602 aa20.94■□□□□ 0.94
PPP4R3A-202ENST00000554390 USP32Q8NFA0 1604 aa20.94■□□□□ 0.94
PPP4R3A-202ENST00000554390 KIF16BQ96L93 1317 aa20.94■□□□□ 0.94
PPP4R3A-202ENST00000554390 K7ELQ4 463 aaPredicted RBP20.94■□□□□ 0.94
PPP4R3A-202ENST00000554390 PPIP5K1Q6PFW1 1433 aa20.94■□□□□ 0.94
PPP4R3A-202ENST00000554390 FOXD4L5Q5VV16 416 aaPredicted RBP20.94■□□□□ 0.94
PPP4R3A-202ENST00000554390 NME9Q86XW9 330 aa20.94■□□□□ 0.94
PPP4R3A-202ENST00000554390 FOXD4L4Q8WXT5 416 aaPredicted RBP20.94■□□□□ 0.94
PPP4R3A-202ENST00000554390 NSD2O96028 1365 aa20.94■□□□□ 0.94
PPP4R3A-202ENST00000554390 IBTKQ9P2D0 1353 aaPredicted RBP20.94■□□□□ 0.94
PPP4R3A-202ENST00000554390 VAMP4O75379 141 aa20.93■□□□□ 0.94
PPP4R3A-202ENST00000554390 MBIPQ9NS73 344 aa20.93■□□□□ 0.94
PPP4R3A-202ENST00000554390 ADGRB2O60241 1585 aa20.93■□□□□ 0.94
PPP4R3A-202ENST00000554390 SMARCA5O60264 1052 aaPredicted RBP20.92■□□□□ 0.94
PPP4R3A-202ENST00000554390 HDGFL2Q7Z4V5 671 aaPredicted RBP20.92■□□□□ 0.94
PPP4R3A-202ENST00000554390 SIGLEC1Q9BZZ2 1709 aa20.92■□□□□ 0.94
PPP4R3A-202ENST00000554390 AK9Q5TCS8 1911 aa20.92■□□□□ 0.94
PPP4R3A-202ENST00000554390 BAG4O95429 457 aaKnown RBP20.92■□□□□ 0.94
PPP4R3A-202ENST00000554390 NCLP19338 710 aaKnown RBP20.91■□□□□ 0.94
PPP4R3A-202ENST00000554390 PKP1Q13835 747 aa20.91■□□□□ 0.94
PPP4R3A-202ENST00000554390 XPCQ01831 940 aaPredicted RBP20.91■□□□□ 0.94
PPP4R3A-202ENST00000554390 MLECQ14165 292 aa20.91■□□□□ 0.94
PPP4R3A-202ENST00000554390 HECW2Q9P2P5 1572 aa20.91■□□□□ 0.94
PPP4R3A-202ENST00000554390 UQCRHLA0A096LP55 91 aa20.91■□□□□ 0.94
PPP4R3A-202ENST00000554390 UQCRHP07919 91 aa20.91■□□□□ 0.94
PPP4R3A-202ENST00000554390 NOL7Q9UMY1 257 aaKnown RBP20.91■□□□□ 0.94
PPP4R3A-202ENST00000554390 HS1BP3Q53T59 392 aa20.9■□□□□ 0.94
PPP4R3A-202ENST00000554390 CLEC17AQ6ZS10 378 aa20.9■□□□□ 0.94
PPP4R3A-202ENST00000554390 MRPL50Q8N5N7 158 aaKnown RBP20.9■□□□□ 0.94
PPP4R3A-202ENST00000554390 NEXMIFQ5QGS0 1516 aa20.89■□□□□ 0.94
PPP4R3A-202ENST00000554390 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.89■□□□□ 0.94
PPP4R3A-202ENST00000554390 ZNF500O60304 480 aaPredicted RBP20.89■□□□□ 0.93
PPP4R3A-202ENST00000554390 GSPT1P15170 499 aaKnown RBP20.89■□□□□ 0.93
PPP4R3A-202ENST00000554390 ZNF445P59923 1031 aa20.89■□□□□ 0.93
PPP4R3A-202ENST00000554390 TWISTNBQ3B726 338 aaPredicted RBP20.89■□□□□ 0.93
PPP4R3A-202ENST00000554390 ARID3AQ99856 593 aa20.88■□□□□ 0.93
PPP4R3A-202ENST00000554390 CT47B1P0C2W7 299 aaPredicted RBP20.88■□□□□ 0.93
PPP4R3A-202ENST00000554390 CAVIN1Q6NZI2 390 aaKnown RBP20.88■□□□□ 0.93
PPP4R3A-202ENST00000554390 MIS18AQ9NYP9 233 aa20.88■□□□□ 0.93
PPP4R3A-202ENST00000554390 COL3A1P02461 1466 aaPredicted RBP20.88■□□□□ 0.93
PPP4R3A-202ENST00000554390 TPRNQ4KMQ1 711 aa20.87■□□□□ 0.93
PPP4R3A-202ENST00000554390 BMP2KLQ5H9B9 411 aa20.87■□□□□ 0.93
PPP4R3A-202ENST00000554390 RBSNQ9H1K0 784 aa20.87■□□□□ 0.93
PPP4R3A-202ENST00000554390 MCTP1Q6DN14 999 aa20.86■□□□□ 0.93
PPP4R3A-202ENST00000554390 AEBP1Q8IUX7 1158 aa20.86■□□□□ 0.93
PPP4R3A-202ENST00000554390 ZSCAN23Q3MJ62 389 aa20.86■□□□□ 0.93
PPP4R3A-202ENST00000554390 TSHZ3Q63HK5 1081 aa20.86■□□□□ 0.93
PPP4R3A-202ENST00000554390 CD163L1Q9NR16 1453 aa20.86■□□□□ 0.93
PPP4R3A-202ENST00000554390 FCHSD2O94868 740 aa20.85■□□□□ 0.93
PPP4R3A-202ENST00000554390 PDLIM2Q96JY6 352 aa20.85■□□□□ 0.93
PPP4R3A-202ENST00000554390 NFE2L2Q16236 605 aa20.85■□□□□ 0.93
PPP4R3A-202ENST00000554390 MLH3Q9UHC1 1453 aa20.84■□□□□ 0.93
PPP4R3A-202ENST00000554390 ZBTB7CA1YPR0 619 aa20.84■□□□□ 0.93
PPP4R3A-202ENST00000554390 NOL8Q76FK4 1167 aaKnown RBP20.84■□□□□ 0.93
PPP4R3A-202ENST00000554390 LRRC7Q96NW7 1537 aa20.84■□□□□ 0.93
PPP4R3A-202ENST00000554390 FOXD4L6Q3SYB3 417 aaPredicted RBP20.83■□□□□ 0.92
PPP4R3A-202ENST00000554390 FOXD4L3Q6VB84 417 aaPredicted RBP20.83■□□□□ 0.92
PPP4R3A-202ENST00000554390 MCM10Q7L590 875 aa20.83■□□□□ 0.92
PPP4R3A-202ENST00000554390 ALDH1L2Q3SY69 923 aa20.82■□□□□ 0.92
PPP4R3A-202ENST00000554390 PUS7Q96PZ0 661 aaKnown RBP20.82■□□□□ 0.92
PPP4R3A-202ENST00000554390 PRIM1P49642 420 aaKnown RBP20.82■□□□□ 0.92
PPP4R3A-202ENST00000554390 SMAP1Q8IYB5 467 aaPredicted RBP20.82■□□□□ 0.92
PPP4R3A-202ENST00000554390 ZKSCAN5Q9Y2L8 839 aa20.82■□□□□ 0.92
PPP4R3A-202ENST00000554390 IL16Q14005 1332 aa20.81■□□□□ 0.92
PPP4R3A-202ENST00000554390 DYNC1I1O14576 645 aa20.81■□□□□ 0.92
PPP4R3A-202ENST00000554390 TXNDC2Q86VQ3 553 aa20.81■□□□□ 0.92
PPP4R3A-202ENST00000554390 LMBRD1Q9NUN5 540 aa20.81■□□□□ 0.92
PPP4R3A-202ENST00000554390 PLEKHG5O94827 1062 aa20.81■□□□□ 0.92
PPP4R3A-202ENST00000554390 ZGPATQ8N5A5 531 aaKnown RBP20.81■□□□□ 0.92
PPP4R3A-202ENST00000554390 MTERF4Q7Z6M4 381 aaKnown RBP20.8■□□□□ 0.92
PPP4R3A-202ENST00000554390 YEATS2Q9ULM3 1422 aa20.8■□□□□ 0.92
PPP4R3A-202ENST00000554390 NCBP3Q53F19 620 aaKnown RBP20.8■□□□□ 0.92
PPP4R3A-202ENST00000554390 PLEKHM2Q8IWE5 1019 aa20.8■□□□□ 0.92
PPP4R3A-202ENST00000554390 YTHDC2Q9H6S0 1430 aaKnown RBP20.8■□□□□ 0.92
PPP4R3A-202ENST00000554390 MYO5BQ9ULV0 1848 aa20.79■□□□□ 0.92
PPP4R3A-202ENST00000554390 PIK3C2BO00750 1634 aa20.79■□□□□ 0.92
PPP4R3A-202ENST00000554390 CSPP1Q1MSJ5 1256 aa20.79■□□□□ 0.92
PPP4R3A-202ENST00000554390 ARHGAP31Q2M1Z3 1444 aa20.79■□□□□ 0.92
PPP4R3A-202ENST00000554390 PTPRMP28827 1452 aa20.79■□□□□ 0.92
PPP4R3A-202ENST00000554390 DTNBO60941 627 aa20.78■□□□□ 0.92
PPP4R3A-202ENST00000554390 SLC4A10Q6U841 1118 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms