RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 RARSP54136 660 aaKnown RBP18.82■□□□□ 0.6
PPP4R3A-201ENST00000554308 NLRP6P59044 892 aa18.82■□□□□ 0.6
PPP4R3A-201ENST00000554308 RGPD8O14715 1765 aaPredicted RBP18.81■□□□□ 0.6
PPP4R3A-201ENST00000554308 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
PPP4R3A-201ENST00000554308 THUMPD2Q9BTF0 503 aaKnown RBP18.81■□□□□ 0.6
PPP4R3A-201ENST00000554308 EIF4A2Q14240 407 aaKnown RBP18.8■□□□□ 0.6
PPP4R3A-201ENST00000554308 C8orf34Q49A92 452 aa18.8■□□□□ 0.6
PPP4R3A-201ENST00000554308 CDK12Q9NYV4 1490 aaPredicted RBP18.8■□□□□ 0.6
PPP4R3A-201ENST00000554308 EXOSC9Q06265 439 aaKnown RBP18.8■□□□□ 0.6
PPP4R3A-201ENST00000554308 TOPAZ1Q8N9V7 1692 aa18.8■□□□□ 0.6
PPP4R3A-201ENST00000554308 LRRC7Q96NW7 1537 aa18.8■□□□□ 0.6
PPP4R3A-201ENST00000554308 OVOS2A0A0J9YW53 1432 aa18.79■□□□□ 0.6
PPP4R3A-201ENST00000554308 NPHP4O75161 1426 aaPredicted RBP18.79■□□□□ 0.6
PPP4R3A-201ENST00000554308 OVOS2Q6IE36 1432 aa18.79■□□□□ 0.6
PPP4R3A-201ENST00000554308 SSH2Q76I76 1423 aa18.79■□□□□ 0.6
PPP4R3A-201ENST00000554308 TTC21AQ8NDW8 1320 aa18.79■□□□□ 0.6
PPP4R3A-201ENST00000554308 RGS3P49796 1198 aa18.79■□□□□ 0.6
PPP4R3A-201ENST00000554308 ESCO1Q5FWF5 840 aa18.79■□□□□ 0.6
PPP4R3A-201ENST00000554308 CENPQQ7L2Z9 268 aaPredicted RBP18.79■□□□□ 0.6
PPP4R3A-201ENST00000554308 AEBP1Q8IUX7 1158 aa18.79■□□□□ 0.6
PPP4R3A-201ENST00000554308 ABTB2Q8N961 1025 aa18.79■□□□□ 0.6
PPP4R3A-201ENST00000554308 SULT6B1Q6IMI4 303 aa18.79■□□□□ 0.6
PPP4R3A-201ENST00000554308 PANK1Q8TE04 598 aa18.79■□□□□ 0.6
PPP4R3A-201ENST00000554308 NFE2L2Q16236 605 aa18.78■□□□□ 0.6
PPP4R3A-201ENST00000554308 PHF8Q9UPP1 1060 aa18.78■□□□□ 0.6
PPP4R3A-201ENST00000554308 MAP3K19Q56UN5 1328 aa18.78■□□□□ 0.6
PPP4R3A-201ENST00000554308 PLEKHG5O94827 1062 aa18.77■□□□□ 0.6
PPP4R3A-201ENST00000554308 GSE1Q14687 1217 aa18.77■□□□□ 0.6
PPP4R3A-201ENST00000554308 ZNF142P52746 1687 aaPredicted RBP18.77■□□□□ 0.6
PPP4R3A-201ENST00000554308 FAM161AQ3B820 660 aa18.76■□□□□ 0.59
PPP4R3A-201ENST00000554308 AMPHP49418 695 aa18.76■□□□□ 0.59
PPP4R3A-201ENST00000554308 CLUAP1Q96AJ1 413 aa18.76■□□□□ 0.59
PPP4R3A-201ENST00000554308 COG6Q9Y2V7 657 aa18.76■□□□□ 0.59
PPP4R3A-201ENST00000554308 NRKQ7Z2Y5 1582 aa18.75■□□□□ 0.59
PPP4R3A-201ENST00000554308 FAM83GA6ND36 823 aa18.75■□□□□ 0.59
PPP4R3A-201ENST00000554308 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.75■□□□□ 0.59
PPP4R3A-201ENST00000554308 TNNQ9UQP3 1299 aa18.75■□□□□ 0.59
PPP4R3A-201ENST00000554308 ANKARQ7Z5J8 1434 aa18.75■□□□□ 0.59
PPP4R3A-201ENST00000554308 PSME1Q06323 249 aa18.74■□□□□ 0.59
PPP4R3A-201ENST00000554308 PROSER2Q86WR7 435 aaPredicted RBP18.74■□□□□ 0.59
PPP4R3A-201ENST00000554308 DAXXQ9UER7 740 aaPredicted RBP18.74■□□□□ 0.59
PPP4R3A-201ENST00000554308 USP31Q70CQ4 1352 aa18.74■□□□□ 0.59
PPP4R3A-201ENST00000554308 CHD2O14647 1828 aaKnown RBP18.74■□□□□ 0.59
PPP4R3A-201ENST00000554308 PRKCSHP14314 528 aaPredicted RBP18.73■□□□□ 0.59
PPP4R3A-201ENST00000554308 XPCQ01831 940 aaPredicted RBP18.73■□□□□ 0.59
PPP4R3A-201ENST00000554308 DCTN1Q14203 1278 aa18.73■□□□□ 0.59
PPP4R3A-201ENST00000554308 PDE3AQ14432 1141 aa18.73■□□□□ 0.59
PPP4R3A-201ENST00000554308 ORAI2Q96SN7 254 aa18.73■□□□□ 0.59
PPP4R3A-201ENST00000554308 IL16Q14005 1332 aa18.72■□□□□ 0.59
PPP4R3A-201ENST00000554308 FOXO3O43524 673 aa18.72■□□□□ 0.59
PPP4R3A-201ENST00000554308 HSPA2P54652 639 aa18.72■□□□□ 0.59
PPP4R3A-201ENST00000554308 SMC4Q9NTJ3 1288 aa18.72■□□□□ 0.59
PPP4R3A-201ENST00000554308 RLBP1P12271 317 aa18.71■□□□□ 0.59
PPP4R3A-201ENST00000554308 FRAT2O75474 233 aaPredicted RBP18.7■□□□□ 0.58
PPP4R3A-201ENST00000554308 ELL2O00472 640 aaPredicted RBP18.7■□□□□ 0.58
PPP4R3A-201ENST00000554308 SSH1Q8WYL5 1049 aa18.7■□□□□ 0.58
PPP4R3A-201ENST00000554308 LMOD2Q6P5Q4 547 aa18.69■□□□□ 0.58
PPP4R3A-201ENST00000554308 LTV1Q96GA3 475 aaPredicted RBP18.69■□□□□ 0.58
PPP4R3A-201ENST00000554308 NALCNQ8IZF0 1738 aa18.69■□□□□ 0.58
PPP4R3A-201ENST00000554308 ADGRL3Q9HAR2 1447 aa18.69■□□□□ 0.58
PPP4R3A-201ENST00000554308 ZBTB7CA1YPR0 619 aa18.68■□□□□ 0.58
PPP4R3A-201ENST00000554308 FMN2Q9NZ56 1722 aa18.68■□□□□ 0.58
PPP4R3A-201ENST00000554308 FLT4P35916 1363 aa18.68■□□□□ 0.58
PPP4R3A-201ENST00000554308 SBNO1A3KN83 1393 aa18.67■□□□□ 0.58
PPP4R3A-201ENST00000554308 IGHDP01880 384 aa18.67■□□□□ 0.58
PPP4R3A-201ENST00000554308 CT47B1P0C2W7 299 aaPredicted RBP18.67■□□□□ 0.58
PPP4R3A-201ENST00000554308 CALD1Q05682 793 aaKnown RBP18.66■□□□□ 0.58
PPP4R3A-201ENST00000554308 EYA1Q99502 592 aa18.66■□□□□ 0.58
PPP4R3A-201ENST00000554308 PEAK1Q9H792 1746 aa18.66■□□□□ 0.58
PPP4R3A-201ENST00000554308 LMOD3Q0VAK6 560 aa18.66■□□□□ 0.58
PPP4R3A-201ENST00000554308 MBIPQ9NS73 344 aa18.66■□□□□ 0.58
PPP4R3A-201ENST00000554308 PIK3C2AO00443 1686 aa18.65■□□□□ 0.58
PPP4R3A-201ENST00000554308 GNAI1P63096 354 aa18.65■□□□□ 0.58
PPP4R3A-201ENST00000554308 ZKSCAN2Q63HK3 967 aa18.65■□□□□ 0.58
PPP4R3A-201ENST00000554308 MCM10Q7L590 875 aa18.65■□□□□ 0.58
PPP4R3A-201ENST00000554308 FTSJ3Q8IY81 847 aaKnown RBP18.65■□□□□ 0.58
PPP4R3A-201ENST00000554308 HOXC9P31274 260 aa18.65■□□□□ 0.58
PPP4R3A-201ENST00000554308 TSPYL6Q8N831 410 aa18.65■□□□□ 0.58
PPP4R3A-201ENST00000554308 NOB1Q9ULX3 412 aaKnown RBP18.64■□□□□ 0.57
PPP4R3A-201ENST00000554308 IFT57Q9NWB7 429 aa18.63■□□□□ 0.57
PPP4R3A-201ENST00000554308 CFAP44Q96MT7 982 aa18.63■□□□□ 0.57
PPP4R3A-201ENST00000554308 C19orf44Q9H6X5 657 aa18.63■□□□□ 0.57
PPP4R3A-201ENST00000554308 SEC24BO95487 1268 aa18.62■□□□□ 0.57
PPP4R3A-201ENST00000554308 TRIM27P14373 513 aa18.62■□□□□ 0.57
PPP4R3A-201ENST00000554308 DZIP1LQ8IYY4 767 aaKnown RBP18.62■□□□□ 0.57
PPP4R3A-201ENST00000554308 USP19O94966 1318 aa18.61■□□□□ 0.57
PPP4R3A-201ENST00000554308 ZNF853P0CG23 659 aa18.61■□□□□ 0.57
PPP4R3A-201ENST00000554308 MTHFSDQ2M296 383 aaKnown RBP18.61■□□□□ 0.57
PPP4R3A-201ENST00000554308 VAMP4O75379 141 aa18.6■□□□□ 0.57
PPP4R3A-201ENST00000554308 ATF7IPQ6VMQ6 1270 aa18.6■□□□□ 0.57
PPP4R3A-201ENST00000554308 USHBP1Q8N6Y0 703 aa18.6■□□□□ 0.57
PPP4R3A-201ENST00000554308 C8orf58Q8NAV2 365 aa18.6■□□□□ 0.57
PPP4R3A-201ENST00000554308 ATF3P18847 181 aa18.59■□□□□ 0.57
PPP4R3A-201ENST00000554308 MIS18AQ9NYP9 233 aa18.59■□□□□ 0.57
PPP4R3A-201ENST00000554308 MVPQ14764 893 aaKnown RBP18.58■□□□□ 0.57
PPP4R3A-201ENST00000554308 TWISTNBQ3B726 338 aaPredicted RBP18.58■□□□□ 0.57
PPP4R3A-201ENST00000554308 ITPRIPQ8IWB1 547 aa18.58■□□□□ 0.57
PPP4R3A-201ENST00000554308 DDX17Q92841 729 aaKnown RBP18.58■□□□□ 0.57
PPP4R3A-201ENST00000554308 IGSF1Q8N6C5 1336 aa18.58■□□□□ 0.56
PPP4R3A-201ENST00000554308 ARHGEF10O15013 1369 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms