RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 NCBP3Q53F19 620 aaKnown RBP18.44■□□□□ 0.54
ARHGEF40-202ENST00000553709 GPRASP1Q5JY77 1395 aa18.44■□□□□ 0.54
ARHGEF40-202ENST00000553709 CCT4P50991 539 aaKnown RBP18.44■□□□□ 0.54
ARHGEF40-202ENST00000553709 PLEKHO1Q53GL0 409 aaPredicted RBP18.44■□□□□ 0.54
ARHGEF40-202ENST00000553709 FBXW7Q969H0 707 aa18.44■□□□□ 0.54
ARHGEF40-202ENST00000553709 IFT57Q9NWB7 429 aa18.43■□□□□ 0.54
ARHGEF40-202ENST00000553709 PRPF40AO75400 957 aaKnown RBP18.43■□□□□ 0.54
ARHGEF40-202ENST00000553709 CCDC70Q6NSX1 233 aa18.43■□□□□ 0.54
ARHGEF40-202ENST00000553709 PZPP20742 1482 aa18.43■□□□□ 0.54
ARHGEF40-202ENST00000553709 PDE4CQ08493 712 aa18.43■□□□□ 0.54
ARHGEF40-202ENST00000553709 HIP1O00291 1037 aa18.42■□□□□ 0.54
ARHGEF40-202ENST00000553709 WWC1Q8IX03 1113 aa18.42■□□□□ 0.54
ARHGEF40-202ENST00000553709 LETM1O95202 739 aaPredicted RBP18.42■□□□□ 0.54
ARHGEF40-202ENST00000553709 CHD1LQ86WJ1 897 aa18.42■□□□□ 0.54
ARHGEF40-202ENST00000553709 ERC1Q8IUD2 1116 aa18.42■□□□□ 0.54
ARHGEF40-202ENST00000553709 ATAD2Q6PL18 1390 aa18.41■□□□□ 0.54
ARHGEF40-202ENST00000553709 CCDC27Q2M243 656 aa18.41■□□□□ 0.54
ARHGEF40-202ENST00000553709 PCMTD1Q96MG8 357 aaPredicted RBP18.41■□□□□ 0.54
ARHGEF40-202ENST00000553709 BRPF3Q9ULD4 1205 aa18.41■□□□□ 0.54
ARHGEF40-202ENST00000553709 ADGRF5Q8IZF2 1346 aa18.41■□□□□ 0.54
ARHGEF40-202ENST00000553709 HDGFL1Q5TGJ6 251 aa18.41■□□□□ 0.54
ARHGEF40-202ENST00000553709 PRKCSHP14314 528 aaPredicted RBP18.41■□□□□ 0.54
ARHGEF40-202ENST00000553709 PDCP20941 246 aa18.41■□□□□ 0.54
ARHGEF40-202ENST00000553709 GCC2Q8IWJ2 1684 aa18.41■□□□□ 0.54
ARHGEF40-202ENST00000553709 IDI1Q13907 227 aa18.4■□□□□ 0.54
ARHGEF40-202ENST00000553709 CWC22Q9HCG8 908 aaKnown RBP18.4■□□□□ 0.54
ARHGEF40-202ENST00000553709 K7ELQ4 463 aaPredicted RBP18.4■□□□□ 0.54
ARHGEF40-202ENST00000553709 NAT10Q9H0A0 1025 aaKnown RBP18.4■□□□□ 0.54
ARHGEF40-202ENST00000553709 LRRCC1Q9C099 1032 aa18.4■□□□□ 0.54
ARHGEF40-202ENST00000553709 SDF4Q9BRK5 362 aa18.4■□□□□ 0.54
ARHGEF40-202ENST00000553709 NSD3Q9BZ95 1437 aa18.39■□□□□ 0.54
ARHGEF40-202ENST00000553709 ZNF428Q96B54 188 aa18.39■□□□□ 0.54
ARHGEF40-202ENST00000553709 RALGAPBQ86X10 1494 aa18.39■□□□□ 0.54
ARHGEF40-202ENST00000553709 FCHSD2O94868 740 aa18.39■□□□□ 0.53
ARHGEF40-202ENST00000553709 ARHGEF5Q12774 1597 aa18.39■□□□□ 0.53
ARHGEF40-202ENST00000553709 DHX16O60231 1041 aaKnown RBP18.39■□□□□ 0.53
ARHGEF40-202ENST00000553709 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.39■□□□□ 0.53
ARHGEF40-202ENST00000553709 ADGBQ8N7X0 1667 aa18.39■□□□□ 0.53
ARHGEF40-202ENST00000553709 TSPY26PQ9H489 355 aa18.38■□□□□ 0.53
ARHGEF40-202ENST00000553709 R3HCC1Q9Y3T6 440 aaKnown RBP18.38■□□□□ 0.53
ARHGEF40-202ENST00000553709 MSH5O43196 834 aa18.38■□□□□ 0.53
ARHGEF40-202ENST00000553709 DNAJC2Q99543 621 aaKnown RBP18.38■□□□□ 0.53
ARHGEF40-202ENST00000553709 SCAF11Q99590 1463 aaKnown RBP18.38■□□□□ 0.53
ARHGEF40-202ENST00000553709 ESCO1Q5FWF5 840 aa18.37■□□□□ 0.53
ARHGEF40-202ENST00000553709 FBXO31Q5XUX0 539 aaPredicted RBP18.37■□□□□ 0.53
ARHGEF40-202ENST00000553709 NOS1P29475 1434 aa18.37■□□□□ 0.53
ARHGEF40-202ENST00000553709 RAD21O60216 631 aa18.37■□□□□ 0.53
ARHGEF40-202ENST00000553709 ZNF771Q7L3S4 317 aaPredicted RBP18.37■□□□□ 0.53
ARHGEF40-202ENST00000553709 CCDC173Q0VFZ6 552 aa18.36■□□□□ 0.53
ARHGEF40-202ENST00000553709 SRCIN1Q9C0H9 1055 aa18.36■□□□□ 0.53
ARHGEF40-202ENST00000553709 ANO8Q9HCE9 1232 aaPredicted RBP18.36■□□□□ 0.53
ARHGEF40-202ENST00000553709 TMPOP42166 694 aaKnown RBP18.36■□□□□ 0.53
ARHGEF40-202ENST00000553709 FIBPO43427 364 aa18.36■□□□□ 0.53
ARHGEF40-202ENST00000553709 TRIM34Q9BYJ4 488 aa18.35■□□□□ 0.53
ARHGEF40-202ENST00000553709 MYO5CQ9NQX4 1742 aa18.35■□□□□ 0.53
ARHGEF40-202ENST00000553709 OLFM4Q6UX06 510 aa18.35■□□□□ 0.53
ARHGEF40-202ENST00000553709 ATP7AQ04656 1500 aa18.34■□□□□ 0.53
ARHGEF40-202ENST00000553709 TRIM5Q9C035 493 aa18.34■□□□□ 0.53
ARHGEF40-202ENST00000553709 ARHGEF12Q9NZN5 1544 aa18.34■□□□□ 0.53
ARHGEF40-202ENST00000553709 NFE2L2Q16236 605 aa18.34■□□□□ 0.53
ARHGEF40-202ENST00000553709 PRAG1Q86YV5 1406 aa18.34■□□□□ 0.53
ARHGEF40-202ENST00000553709 KINO60870 393 aaKnown RBP18.34■□□□□ 0.53
ARHGEF40-202ENST00000553709 MNS1Q8NEH6 495 aa18.34■□□□□ 0.53
ARHGEF40-202ENST00000553709 CYP46A1Q9Y6A2 500 aa18.34■□□□□ 0.53
ARHGEF40-202ENST00000553709 C14orf93Q9H972 538 aaKnown RBP18.33■□□□□ 0.53
ARHGEF40-202ENST00000553709 CIZ1Q9ULV3 898 aaPredicted RBP18.33■□□□□ 0.53
ARHGEF40-202ENST00000553709 TBC1D2BQ9UPU7 963 aa18.33■□□□□ 0.53
ARHGEF40-202ENST00000553709 TMEM57Q8N5G2 664 aa18.33■□□□□ 0.52
ARHGEF40-202ENST00000553709 RRS1Q15050 365 aaKnown RBP18.33■□□□□ 0.52
ARHGEF40-202ENST00000553709 RPAP2Q8IXW5 612 aaPredicted RBP18.33■□□□□ 0.52
ARHGEF40-202ENST00000553709 XBP1P17861 261 aa18.32■□□□□ 0.52
ARHGEF40-202ENST00000553709 BRMS1Q9HCU9 246 aa18.32■□□□□ 0.52
ARHGEF40-202ENST00000553709 WDR33Q9C0J8 1336 aaKnown RBP18.32■□□□□ 0.52
ARHGEF40-202ENST00000553709 TEX35Q5T0J7 233 aa18.32■□□□□ 0.52
ARHGEF40-202ENST00000553709 ARGLU1Q9NWB6 273 aaPredicted RBP18.32■□□□□ 0.52
ARHGEF40-202ENST00000553709 MBD5Q9P267 1494 aa18.32■□□□□ 0.52
ARHGEF40-202ENST00000553709 MCM4P33991 863 aa18.31■□□□□ 0.52
ARHGEF40-202ENST00000553709 SART3Q15020 963 aaKnown RBP18.31■□□□□ 0.52
ARHGEF40-202ENST00000553709 ZNF530Q6P9A1 599 aaPredicted RBP18.31■□□□□ 0.52
ARHGEF40-202ENST00000553709 AEBP1Q8IUX7 1158 aa18.3■□□□□ 0.52
ARHGEF40-202ENST00000553709 C20orf194Q5TEA3 1177 aa18.3■□□□□ 0.52
ARHGEF40-202ENST00000553709 TATP17735 454 aaPredicted RBP18.3■□□□□ 0.52
ARHGEF40-202ENST00000553709 IL27Q8NEV9 243 aa18.3■□□□□ 0.52
ARHGEF40-202ENST00000553709 GRPEL1Q9HAV7 217 aa18.3■□□□□ 0.52
ARHGEF40-202ENST00000553709 RARSP54136 660 aaKnown RBP18.29■□□□□ 0.52
ARHGEF40-202ENST00000553709 ANKRD1Q15327 319 aa18.29■□□□□ 0.52
ARHGEF40-202ENST00000553709 ZNF396Q96N95 335 aaPredicted RBP18.29■□□□□ 0.52
ARHGEF40-202ENST00000553709 MAST1Q9Y2H9 1570 aa18.29■□□□□ 0.52
ARHGEF40-202ENST00000553709 FYB1O15117 783 aa18.29■□□□□ 0.52
ARHGEF40-202ENST00000553709 RBM33Q96EV2 1170 aaKnown RBP18.29■□□□□ 0.52
ARHGEF40-202ENST00000553709 NKTRP30414 1462 aaKnown RBP18.29■□□□□ 0.52
ARHGEF40-202ENST00000553709 MTERF4Q7Z6M4 381 aaKnown RBP18.28■□□□□ 0.52
ARHGEF40-202ENST00000553709 TCEAL9Q9UHQ7 104 aa18.28■□□□□ 0.52
ARHGEF40-202ENST00000553709 ANKLE2Q86XL3 938 aa18.28■□□□□ 0.52
ARHGEF40-202ENST00000553709 SLC26A8Q96RN1 970 aa18.28■□□□□ 0.52
ARHGEF40-202ENST00000553709 EIF2AK4Q9P2K8 1649 aaKnown RBP18.28■□□□□ 0.52
ARHGEF40-202ENST00000553709 KIF6Q6ZMV9 814 aa18.27■□□□□ 0.52
ARHGEF40-202ENST00000553709 MAP7D2Q96T17 732 aa18.27■□□□□ 0.52
ARHGEF40-202ENST00000553709 SAMD9LQ8IVG5 1584 aa18.27■□□□□ 0.52
ARHGEF40-202ENST00000553709 SRGAP3O43295 1099 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms