RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 GNAI1P63096 354 aa12.11□□□□□ -0.47
MTHFD1-203ENST00000553391 PSME1Q06323 249 aa12.11□□□□□ -0.47
MTHFD1-203ENST00000553391 LMOD3Q0VAK6 560 aa12.11□□□□□ -0.47
MTHFD1-203ENST00000553391 AAMPQ13685 434 aa12.11□□□□□ -0.47
MTHFD1-203ENST00000553391 ESCO1Q5FWF5 840 aa12.11□□□□□ -0.47
MTHFD1-203ENST00000553391 AEBP1Q8IUX7 1158 aa12.11□□□□□ -0.47
MTHFD1-203ENST00000553391 C19orf44Q9H6X5 657 aa12.11□□□□□ -0.47
MTHFD1-203ENST00000553391 IFT57Q9NWB7 429 aa12.11□□□□□ -0.47
MTHFD1-203ENST00000553391 FMN2Q9NZ56 1722 aa12.11□□□□□ -0.47
MTHFD1-203ENST00000553391 TCERG1O14776 1098 aaKnown RBP12.1□□□□□ -0.47
MTHFD1-203ENST00000553391 VAMP4O75379 141 aa12.1□□□□□ -0.47
MTHFD1-203ENST00000553391 PANK1Q8TE04 598 aa12.1□□□□□ -0.47
MTHFD1-203ENST00000553391 SSH1Q8WYL5 1049 aa12.1□□□□□ -0.47
MTHFD1-203ENST00000553391 ZNF428Q96B54 188 aa12.1□□□□□ -0.47
MTHFD1-203ENST00000553391 EYA1Q99502 592 aa12.1□□□□□ -0.47
MTHFD1-203ENST00000553391 FLT4P35916 1363 aa12.09□□□□□ -0.47
MTHFD1-203ENST00000553391 MS4A1P11836 297 aa12.09□□□□□ -0.47
MTHFD1-203ENST00000553391 HOXC9P31274 260 aa12.09□□□□□ -0.47
MTHFD1-203ENST00000553391 ALDH1L2Q3SY69 923 aa12.09□□□□□ -0.47
MTHFD1-203ENST00000553391 ZKSCAN2Q63HK3 967 aa12.09□□□□□ -0.47
MTHFD1-203ENST00000553391 CFAP44Q96MT7 982 aa12.09□□□□□ -0.47
MTHFD1-203ENST00000553391 ORAI2Q96SN7 254 aa12.09□□□□□ -0.47
MTHFD1-203ENST00000553391 LRRC7Q96NW7 1537 aa12.09□□□□□ -0.47
MTHFD1-203ENST00000553391 RGPD8O14715 1765 aaPredicted RBP12.08□□□□□ -0.48
MTHFD1-203ENST00000553391 SOX12O15370 315 aa12.08□□□□□ -0.48
MTHFD1-203ENST00000553391 PAK3O75914 559 aaPredicted RBP12.08□□□□□ -0.48
MTHFD1-203ENST00000553391 NUTM2GQ5VZR2 741 aa12.08□□□□□ -0.48
MTHFD1-203ENST00000553391 CENPQQ7L2Z9 268 aaPredicted RBP12.08□□□□□ -0.48
MTHFD1-203ENST00000553391 C14orf37Q86TY3 774 aa12.08□□□□□ -0.48
MTHFD1-203ENST00000553391 IP6K1Q92551 441 aa12.08□□□□□ -0.48
MTHFD1-203ENST00000553391 FRAT1Q92837 279 aaPredicted RBP12.08□□□□□ -0.48
MTHFD1-203ENST00000553391 THUMPD2Q9BTF0 503 aaKnown RBP12.08□□□□□ -0.48
MTHFD1-203ENST00000553391 TNNQ9UQP3 1299 aa12.08□□□□□ -0.48
MTHFD1-203ENST00000553391 COG6Q9Y2V7 657 aa12.08□□□□□ -0.48
MTHFD1-203ENST00000553391 ARHGEF10O15013 1369 aa12.07□□□□□ -0.48
MTHFD1-203ENST00000553391 MSH5O43196 834 aa12.07□□□□□ -0.48
MTHFD1-203ENST00000553391 RLBP1P12271 317 aa12.07□□□□□ -0.48
MTHFD1-203ENST00000553391 NCOA3Q9Y6Q9 1424 aa12.07□□□□□ -0.48
MTHFD1-203ENST00000553391 IGSF1Q8N6C5 1336 aa12.07□□□□□ -0.48
MTHFD1-203ENST00000553391 NALCNQ8IZF0 1738 aa12.06□□□□□ -0.48
MTHFD1-203ENST00000553391 PEAK1Q9H792 1746 aa12.06□□□□□ -0.48
MTHFD1-203ENST00000553391 NWD1Q149M9 1564 aa12.06□□□□□ -0.48
MTHFD1-203ENST00000553391 KDM4FA0A1W2PPD8 638 aa12.06□□□□□ -0.48
MTHFD1-203ENST00000553391 FAM83GA6ND36 823 aa12.06□□□□□ -0.48
MTHFD1-203ENST00000553391 CHL1O00533 1208 aa12.06□□□□□ -0.48
MTHFD1-203ENST00000553391 HTATSF1O43719 755 aaKnown RBP12.06□□□□□ -0.48
MTHFD1-203ENST00000553391 CANXP27824 592 aaKnown RBP12.06□□□□□ -0.48
MTHFD1-203ENST00000553391 KRT28Q7Z3Y7 464 aa12.06□□□□□ -0.48
MTHFD1-203ENST00000553391 KCNH5Q8NCM2 988 aa12.06□□□□□ -0.48
MTHFD1-203ENST00000553391 MBIPQ9NS73 344 aa12.06□□□□□ -0.48
MTHFD1-203ENST00000553391 LAS1LQ9Y4W2 734 aaKnown RBP12.06□□□□□ -0.48
MTHFD1-203ENST00000553391 KDRP35968 1356 aa12.05□□□□□ -0.48
MTHFD1-203ENST00000553391 FOXO3O43524 673 aa12.05□□□□□ -0.48
MTHFD1-203ENST00000553391 IGHDP01880 384 aa12.05□□□□□ -0.48
MTHFD1-203ENST00000553391 DCTN1Q14203 1278 aa12.05□□□□□ -0.48
MTHFD1-203ENST00000553391 MTHFSDQ2M296 383 aaKnown RBP12.05□□□□□ -0.48
MTHFD1-203ENST00000553391 DZIP1LQ8IYY4 767 aaKnown RBP12.05□□□□□ -0.48
MTHFD1-203ENST00000553391 MRPL50Q8N5N7 158 aaKnown RBP12.05□□□□□ -0.48
MTHFD1-203ENST00000553391 CLUAP1Q96AJ1 413 aa12.05□□□□□ -0.48
MTHFD1-203ENST00000553391 BCL2L13Q9BXK5 485 aa12.05□□□□□ -0.48
MTHFD1-203ENST00000553391 SMC4Q9NTJ3 1288 aa12.05□□□□□ -0.48
MTHFD1-203ENST00000553391 NOB1Q9ULX3 412 aaKnown RBP12.05□□□□□ -0.48
MTHFD1-203ENST00000553391 IPO8O15397 1037 aaKnown RBP12.04□□□□□ -0.48
MTHFD1-203ENST00000553391 ATF7IPQ6VMQ6 1270 aa12.04□□□□□ -0.48
MTHFD1-203ENST00000553391 PIAS4Q8N2W9 510 aaPredicted RBP12.04□□□□□ -0.48
MTHFD1-203ENST00000553391 TSPYL6Q8N831 410 aa12.04□□□□□ -0.48
MTHFD1-203ENST00000553391 C8orf58Q8NAV2 365 aa12.04□□□□□ -0.48
MTHFD1-203ENST00000553391 ARHGAP45Q92619 1136 aa12.04□□□□□ -0.48
MTHFD1-203ENST00000553391 PIK3C2AO00443 1686 aa12.03□□□□□ -0.48
MTHFD1-203ENST00000553391 C1orf167Q5SNV9 1468 aa12.03□□□□□ -0.48
MTHFD1-203ENST00000553391 HSPA2P54652 639 aa12.03□□□□□ -0.48
MTHFD1-203ENST00000553391 MVPQ14764 893 aaKnown RBP12.03□□□□□ -0.48
MTHFD1-203ENST00000553391 ARHGEF25Q86VW2 580 aa12.03□□□□□ -0.48
MTHFD1-203ENST00000553391 GCP02774 474 aa12.02□□□□□ -0.49
MTHFD1-203ENST00000553391 TRIM27P14373 513 aa12.02□□□□□ -0.49
MTHFD1-203ENST00000553391 GAS2L2Q8NHY3 880 aa12.02□□□□□ -0.49
MTHFD1-203ENST00000553391 PCDHB15Q9Y5E8 787 aa12.02□□□□□ -0.49
MTHFD1-203ENST00000553391 USP54Q70EL1 1684 aa12.02□□□□□ -0.49
MTHFD1-203ENST00000553391 RTL1A6NKG5 1358 aa12.02□□□□□ -0.49
MTHFD1-203ENST00000553391 RGPD1P0DJD0 1748 aa12.01□□□□□ -0.49
MTHFD1-203ENST00000553391 ATF3P18847 181 aa12.01□□□□□ -0.49
MTHFD1-203ENST00000553391 MCM10Q7L590 875 aa12.01□□□□□ -0.49
MTHFD1-203ENST00000553391 TMEM94Q12767 1356 aa12.01□□□□□ -0.49
MTHFD1-203ENST00000553391 CRB1P82279 1406 aa12.01□□□□□ -0.49
MTHFD1-203ENST00000553391 MST1RQ04912 1400 aa12.01□□□□□ -0.49
MTHFD1-203ENST00000553391 PDE4AP27815 886 aa12□□□□□ -0.49
MTHFD1-203ENST00000553391 TWISTNBQ3B726 338 aaPredicted RBP12□□□□□ -0.49
MTHFD1-203ENST00000553391 POTEDQ86YR6 584 aa12□□□□□ -0.49
MTHFD1-203ENST00000553391 USP19O94966 1318 aa12□□□□□ -0.49
MTHFD1-203ENST00000553391 ELL2O00472 640 aaPredicted RBP11.99□□□□□ -0.49
MTHFD1-203ENST00000553391 NBPF6Q5VWK0 638 aa11.99□□□□□ -0.49
MTHFD1-203ENST00000553391 CADPS2Q86UW7 1296 aa11.99□□□□□ -0.49
MTHFD1-203ENST00000553391 LTV1Q96GA3 475 aaPredicted RBP11.99□□□□□ -0.49
MTHFD1-203ENST00000553391 NBPF4Q96M43 638 aa11.99□□□□□ -0.49
MTHFD1-203ENST00000553391 BACH2Q9BYV9 841 aa11.99□□□□□ -0.49
MTHFD1-203ENST00000553391 DDX19BQ9UMR2 479 aa11.99□□□□□ -0.49
MTHFD1-203ENST00000553391 KIF16BQ96L93 1317 aa11.99□□□□□ -0.49
MTHFD1-203ENST00000553391 KIAA0232Q92628 1395 aa11.99□□□□□ -0.49
MTHFD1-203ENST00000553391 MARF1Q9Y4F3 1742 aaKnown RBP11.98□□□□□ -0.49
MTHFD1-203ENST00000553391 XPCQ01831 940 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms