RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 AAMPQ13685 434 aa13.95□□□□□ -0.18
TUBA1C-209ENST00000552448 NCKAP5LQ9HCH0 1330 aa13.95□□□□□ -0.18
TUBA1C-209ENST00000552448 TPM2P07951 284 aa13.94□□□□□ -0.18
TUBA1C-209ENST00000552448 TMPOP42166 694 aaKnown RBP13.94□□□□□ -0.18
TUBA1C-209ENST00000552448 MRE11P49959 708 aa13.94□□□□□ -0.18
TUBA1C-209ENST00000552448 UPF2Q9HAU5 1272 aaKnown RBP13.94□□□□□ -0.18
TUBA1C-209ENST00000552448 PRR36Q9H6K5 1346 aa13.94□□□□□ -0.18
TUBA1C-209ENST00000552448 NRKQ7Z2Y5 1582 aa13.94□□□□□ -0.18
TUBA1C-209ENST00000552448 RARSP54136 660 aaKnown RBP13.94□□□□□ -0.18
TUBA1C-209ENST00000552448 PDE3AQ14432 1141 aa13.94□□□□□ -0.18
TUBA1C-209ENST00000552448 MYH16Q9H6N6 1097 aa13.94□□□□□ -0.18
TUBA1C-209ENST00000552448 VIRMAQ69YN4 1812 aaKnown RBP13.93□□□□□ -0.18
TUBA1C-209ENST00000552448 NALCNQ8IZF0 1738 aa13.93□□□□□ -0.18
TUBA1C-209ENST00000552448 FBLN1P23142 703 aa13.93□□□□□ -0.18
TUBA1C-209ENST00000552448 NME9Q86XW9 330 aa13.93□□□□□ -0.18
TUBA1C-209ENST00000552448 TRIM35Q9UPQ4 493 aa13.93□□□□□ -0.18
TUBA1C-209ENST00000552448 MAP2P11137 1827 aaKnown RBP13.93□□□□□ -0.18
TUBA1C-209ENST00000552448 ANTXR1Q9H6X2 564 aa13.92□□□□□ -0.18
TUBA1C-209ENST00000552448 XRCC6P12956 609 aaKnown RBP eCLIP13.92□□□□□ -0.182e-6■■■■■ 30.8
TUBA1C-209ENST00000552448 AATKQ6ZMQ8 1374 aa13.92□□□□□ -0.18
TUBA1C-209ENST00000552448 RGPD8O14715 1765 aaPredicted RBP13.91□□□□□ -0.18
TUBA1C-209ENST00000552448 FCHSD2O94868 740 aa13.91□□□□□ -0.18
TUBA1C-209ENST00000552448 ZRANB1Q9UGI0 708 aa13.91□□□□□ -0.18
TUBA1C-209ENST00000552448 USP19O94966 1318 aa13.91□□□□□ -0.18
TUBA1C-209ENST00000552448 ADGRL3Q9HAR2 1447 aa13.9□□□□□ -0.18
TUBA1C-209ENST00000552448 LRRC7Q96NW7 1537 aa13.9□□□□□ -0.18
TUBA1C-209ENST00000552448 USP6P35125 1406 aa13.9□□□□□ -0.18
TUBA1C-209ENST00000552448 IL16Q14005 1332 aa13.9□□□□□ -0.18
TUBA1C-209ENST00000552448 PDCL3Q9H2J4 239 aa13.9□□□□□ -0.18
TUBA1C-209ENST00000552448 CDK12Q9NYV4 1490 aaPredicted RBP13.9□□□□□ -0.18
TUBA1C-209ENST00000552448 ACEP12821 1306 aa13.89□□□□□ -0.19
TUBA1C-209ENST00000552448 RGS3P49796 1198 aa13.89□□□□□ -0.19
TUBA1C-209ENST00000552448 SKAP1Q86WV1 359 aa13.89□□□□□ -0.19
TUBA1C-209ENST00000552448 EMILIN1Q9Y6C2 1016 aa13.89□□□□□ -0.19
TUBA1C-209ENST00000552448 TTC21AQ8NDW8 1320 aa13.88□□□□□ -0.19
TUBA1C-209ENST00000552448 RIPK4P57078 832 aa13.88□□□□□ -0.19
TUBA1C-209ENST00000552448 PANK1Q8TE04 598 aa13.88□□□□□ -0.19
TUBA1C-209ENST00000552448 COG3Q96JB2 828 aa13.88□□□□□ -0.19
TUBA1C-209ENST00000552448 CT47B1P0C2W7 299 aaPredicted RBP13.87□□□□□ -0.19
TUBA1C-209ENST00000552448 PTMSP20962 102 aa13.87□□□□□ -0.19
TUBA1C-209ENST00000552448 CANXP27824 592 aaKnown RBP13.87□□□□□ -0.19
TUBA1C-209ENST00000552448 IL13P35225 146 aa13.87□□□□□ -0.19
TUBA1C-209ENST00000552448 MCM4P33991 863 aa13.87□□□□□ -0.19
TUBA1C-209ENST00000552448 TSR2Q969E8 191 aaKnown RBP13.87□□□□□ -0.19
TUBA1C-209ENST00000552448 SSH2Q76I76 1423 aa13.86□□□□□ -0.19
TUBA1C-209ENST00000552448 DDX11L8A8MPP1 907 aa13.86□□□□□ -0.19
TUBA1C-209ENST00000552448 PRKAR2BP31323 418 aa13.86□□□□□ -0.19
TUBA1C-209ENST00000552448 COG6Q9Y2V7 657 aa13.86□□□□□ -0.19
TUBA1C-209ENST00000552448 TTC21BQ7Z4L5 1316 aa13.86□□□□□ -0.19
TUBA1C-209ENST00000552448 ESPNB1AK53 854 aa13.85□□□□□ -0.19
TUBA1C-209ENST00000552448 TERF1P54274 439 aa13.85□□□□□ -0.19
TUBA1C-209ENST00000552448 NCOA3Q9Y6Q9 1424 aa13.85□□□□□ -0.19
TUBA1C-209ENST00000552448 USP54Q70EL1 1684 aa13.85□□□□□ -0.19
TUBA1C-209ENST00000552448 KDM4FA0A1W2PPD8 638 aa13.85□□□□□ -0.19
TUBA1C-209ENST00000552448 EXOSC9Q06265 439 aaKnown RBP13.85□□□□□ -0.19
TUBA1C-209ENST00000552448 CLUAP1Q96AJ1 413 aa13.85□□□□□ -0.19
TUBA1C-209ENST00000552448 BCL2L13Q9BXK5 485 aa13.85□□□□□ -0.19
TUBA1C-209ENST00000552448 CHMP5Q9NZZ3 219 aa13.85□□□□□ -0.19
TUBA1C-209ENST00000552448 RLBP1P12271 317 aa13.84□□□□□ -0.19
TUBA1C-209ENST00000552448 NGDNQ8NEJ9 315 aaKnown RBP13.84□□□□□ -0.19
TUBA1C-209ENST00000552448 PHACTR3Q96KR7 559 aa13.84□□□□□ -0.19
TUBA1C-209ENST00000552448 TBC1D32Q96NH3 1257 aa13.84□□□□□ -0.19
TUBA1C-209ENST00000552448 MAP7D2Q96T17 732 aa13.84□□□□□ -0.19
TUBA1C-209ENST00000552448 TNNQ9UQP3 1299 aa13.84□□□□□ -0.19
TUBA1C-209ENST00000552448 OVOS2A0A0J9YW53 1432 aa13.84□□□□□ -0.19
TUBA1C-209ENST00000552448 OVOS2Q6IE36 1432 aa13.84□□□□□ -0.19
TUBA1C-209ENST00000552448 LMTK3Q96Q04 1460 aa13.84□□□□□ -0.19
TUBA1C-209ENST00000552448 HMOX1P09601 288 aa13.83□□□□□ -0.2
TUBA1C-209ENST00000552448 RRS1Q15050 365 aaKnown RBP13.83□□□□□ -0.2
TUBA1C-209ENST00000552448 TRIM44Q96DX7 344 aaPredicted RBP13.83□□□□□ -0.2
TUBA1C-209ENST00000552448 NUTM2FA1L443 756 aa13.83□□□□□ -0.2
TUBA1C-209ENST00000552448 IGHDP01880 384 aa13.83□□□□□ -0.2
TUBA1C-209ENST00000552448 CALD1Q05682 793 aaKnown RBP13.83□□□□□ -0.2
TUBA1C-209ENST00000552448 NFE2L2Q16236 605 aa13.83□□□□□ -0.2
TUBA1C-209ENST00000552448 PMFBP1Q8TBY8 1022 aa13.83□□□□□ -0.2
TUBA1C-209ENST00000552448 SLKQ9H2G2 1235 aaPredicted RBP13.83□□□□□ -0.2
TUBA1C-209ENST00000552448 USP31Q70CQ4 1352 aa13.82□□□□□ -0.2
TUBA1C-209ENST00000552448 TRAK2O60296 914 aa13.81□□□□□ -0.2
TUBA1C-209ENST00000552448 GRPEL1Q9HAV7 217 aa13.81□□□□□ -0.2
TUBA1C-209ENST00000552448 DCCP43146 1447 aa13.81□□□□□ -0.2
TUBA1C-209ENST00000552448 PIK3C2AO00443 1686 aa13.8□□□□□ -0.2
TUBA1C-209ENST00000552448 KIF1AQ12756 1690 aa13.8□□□□□ -0.2
TUBA1C-209ENST00000552448 SKOR2Q2VWA4 1001 aaPredicted RBP13.8□□□□□ -0.2
TUBA1C-209ENST00000552448 ZKSCAN2Q63HK3 967 aa13.8□□□□□ -0.2
TUBA1C-209ENST00000552448 C14orf37Q86TY3 774 aa13.8□□□□□ -0.2
TUBA1C-209ENST00000552448 SSH1Q8WYL5 1049 aa13.8□□□□□ -0.2
TUBA1C-209ENST00000552448 TBC1D2Q9BYX2 928 aa13.8□□□□□ -0.2
TUBA1C-209ENST00000552448 STRCQ7RTU9 1775 aa13.8□□□□□ -0.2
TUBA1C-209ENST00000552448 PROSER2Q86WR7 435 aaPredicted RBP13.79□□□□□ -0.2
TUBA1C-209ENST00000552448 SMC4Q9NTJ3 1288 aa13.79□□□□□ -0.2
TUBA1C-209ENST00000552448 PHF8Q9UPP1 1060 aa13.79□□□□□ -0.2
TUBA1C-209ENST00000552448 STRCP1A6NGW2 1772 aa13.79□□□□□ -0.2
TUBA1C-209ENST00000552448 C19orf44Q9H6X5 657 aa13.78□□□□□ -0.2
TUBA1C-209ENST00000552448 MVPQ14764 893 aaKnown RBP13.78□□□□□ -0.2
TUBA1C-209ENST00000552448 DZIP1LQ8IYY4 767 aaKnown RBP13.78□□□□□ -0.2
TUBA1C-209ENST00000552448 EIF4A2Q14240 407 aaKnown RBP13.77□□□□□ -0.21
TUBA1C-209ENST00000552448 PCDHB15Q9Y5E8 787 aa13.77□□□□□ -0.21
TUBA1C-209ENST00000552448 PEAK1Q9H792 1746 aa13.77□□□□□ -0.21
TUBA1C-209ENST00000552448 MTERF4Q7Z6M4 381 aaKnown RBP13.76□□□□□ -0.21
TUBA1C-209ENST00000552448 DLG5Q8TDM6 1919 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms