RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 IFT57Q9NWB7 429 aa29.57■■■□□ 2.32
NPAS3-211ENST00000551634 ISY1Q9ULR0 285 aaKnown RBP29.56■■■□□ 2.32
NPAS3-211ENST00000551634 REREQ9P2R6 1566 aa29.56■■■□□ 2.32
NPAS3-211ENST00000551634 ZNF853P0CG23 659 aa29.53■■■□□ 2.32
NPAS3-211ENST00000551634 ANKRD45Q5TZF3 282 aa29.53■■■□□ 2.32
NPAS3-211ENST00000551634 MAP2P11137 1827 aaKnown RBP29.53■■■□□ 2.32
NPAS3-211ENST00000551634 SENP3Q9H4L4 574 aaPredicted RBP29.53■■■□□ 2.32
NPAS3-211ENST00000551634 ABCC4O15439 1325 aa29.53■■■□□ 2.32
NPAS3-211ENST00000551634 PHACTR3Q96KR7 559 aa29.52■■■□□ 2.32
NPAS3-211ENST00000551634 MRE11P49959 708 aa29.51■■■□□ 2.32
NPAS3-211ENST00000551634 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.51■■■□□ 2.31
NPAS3-211ENST00000551634 GZF1Q9H116 711 aaPredicted RBP29.5■■■□□ 2.31
NPAS3-211ENST00000551634 CDK12Q9NYV4 1490 aaPredicted RBP29.49■■■□□ 2.31
NPAS3-211ENST00000551634 EIF5BO60841 1220 aaKnown RBP29.49■■■□□ 2.31
NPAS3-211ENST00000551634 LMOD3Q0VAK6 560 aa29.49■■■□□ 2.31
NPAS3-211ENST00000551634 RRAGDQ9NQL2 400 aaPredicted RBP29.49■■■□□ 2.31
NPAS3-211ENST00000551634 EDC4Q6P2E9 1401 aaKnown RBP29.48■■■□□ 2.31
NPAS3-211ENST00000551634 HSP90AB1P08238 724 aaKnown RBP29.48■■■□□ 2.31
NPAS3-211ENST00000551634 PTMSP20962 102 aa29.48■■■□□ 2.31
NPAS3-211ENST00000551634 IL13P35225 146 aa29.48■■■□□ 2.31
NPAS3-211ENST00000551634 KIF2CQ99661 725 aa29.48■■■□□ 2.31
NPAS3-211ENST00000551634 KIF24Q5T7B8 1368 aa29.48■■■□□ 2.31
NPAS3-211ENST00000551634 AATKQ6ZMQ8 1374 aa29.48■■■□□ 2.31
NPAS3-211ENST00000551634 TSPYL6Q8N831 410 aa29.47■■■□□ 2.31
NPAS3-211ENST00000551634 HMOX1P09601 288 aa29.47■■■□□ 2.31
NPAS3-211ENST00000551634 FBXO31Q5XUX0 539 aaPredicted RBP29.47■■■□□ 2.31
NPAS3-211ENST00000551634 GBP4Q96PP9 640 aa29.47■■■□□ 2.31
NPAS3-211ENST00000551634 CPSF1Q10570 1443 aaKnown RBP29.46■■■□□ 2.31
NPAS3-211ENST00000551634 API5Q9BZZ5 524 aaKnown RBP29.46■■■□□ 2.31
NPAS3-211ENST00000551634 MBIPQ9NS73 344 aa29.46■■■□□ 2.31
NPAS3-211ENST00000551634 STAG3Q9UJ98 1225 aa29.46■■■□□ 2.31
NPAS3-211ENST00000551634 RAB3GAP1Q15042 981 aa29.45■■■□□ 2.31
NPAS3-211ENST00000551634 CFAP44Q96MT7 982 aa29.45■■■□□ 2.31
NPAS3-211ENST00000551634 TBC1D9Q6ZT07 1266 aa29.44■■■□□ 2.3
NPAS3-211ENST00000551634 SIRT2Q8IXJ6 389 aa29.44■■■□□ 2.3
NPAS3-211ENST00000551634 TNPO1Q92973 898 aaKnown RBP29.44■■■□□ 2.3
NPAS3-211ENST00000551634 THUMPD2Q9BTF0 503 aaKnown RBP29.44■■■□□ 2.3
NPAS3-211ENST00000551634 TWISTNBQ3B726 338 aaPredicted RBP29.44■■■□□ 2.3
NPAS3-211ENST00000551634 FBLN1P23142 703 aa29.44■■■□□ 2.3
NPAS3-211ENST00000551634 SKOR2Q2VWA4 1001 aaPredicted RBP29.43■■■□□ 2.3
NPAS3-211ENST00000551634 C1orf115Q9H7X2 142 aa29.42■■■□□ 2.3
NPAS3-211ENST00000551634 EMILIN1Q9Y6C2 1016 aa29.42■■■□□ 2.3
NPAS3-211ENST00000551634 SETD1AO15047 1707 aaKnown RBP29.41■■■□□ 2.3
NPAS3-211ENST00000551634 PPP6R1Q9UPN7 881 aa29.41■■■□□ 2.3
NPAS3-211ENST00000551634 K7ELQ4 463 aaPredicted RBP29.41■■■□□ 2.3
NPAS3-211ENST00000551634 WAPLQ7Z5K2 1190 aa29.41■■■□□ 2.3
NPAS3-211ENST00000551634 PANK2Q9BZ23 570 aa29.4■■■□□ 2.3
NPAS3-211ENST00000551634 CDC45O75419 566 aa29.4■■■□□ 2.3
NPAS3-211ENST00000551634 GRPEL1Q9HAV7 217 aa29.39■■■□□ 2.3
NPAS3-211ENST00000551634 DIP2BQ9P265 1576 aa29.39■■■□□ 2.3
NPAS3-211ENST00000551634 ARXQ96QS3 562 aa29.39■■■□□ 2.3
NPAS3-211ENST00000551634 A2ML1A8K2U0 1454 aa29.39■■■□□ 2.29
NPAS3-211ENST00000551634 DLG5Q8TDM6 1919 aa29.38■■■□□ 2.29
NPAS3-211ENST00000551634 RIMS2Q9UQ26 1411 aa29.37■■■□□ 2.29
NPAS3-211ENST00000551634 WASLO00401 505 aaPredicted RBP29.36■■■□□ 2.29
NPAS3-211ENST00000551634 ELL2O00472 640 aaPredicted RBP29.36■■■□□ 2.29
NPAS3-211ENST00000551634 HSP90AA1P07900 732 aaKnown RBP29.36■■■□□ 2.29
NPAS3-211ENST00000551634 C8orf58Q8NAV2 365 aa29.36■■■□□ 2.29
NPAS3-211ENST00000551634 KIF13AQ9H1H9 1805 aa29.35■■■□□ 2.29
NPAS3-211ENST00000551634 CLCN1P35523 988 aa29.34■■■□□ 2.29
NPAS3-211ENST00000551634 HAP1P54257 671 aaPredicted RBP29.34■■■□□ 2.29
NPAS3-211ENST00000551634 NME9Q86XW9 330 aa29.34■■■□□ 2.29
NPAS3-211ENST00000551634 DCTPP1Q9H773 170 aa29.34■■■□□ 2.29
NPAS3-211ENST00000551634 COG3Q96JB2 828 aa29.33■■■□□ 2.29
NPAS3-211ENST00000551634 CD2BP2O95400 341 aaKnown RBP29.33■■■□□ 2.29
NPAS3-211ENST00000551634 CLEC17AQ6ZS10 378 aa29.33■■■□□ 2.29
NPAS3-211ENST00000551634 SPATA31D1Q6ZQQ2 1576 aa29.32■■■□□ 2.28
NPAS3-211ENST00000551634 AGLP35573 1532 aa29.32■■■□□ 2.28
NPAS3-211ENST00000551634 INTS3Q68E01 1043 aaKnown RBP29.31■■■□□ 2.28
NPAS3-211ENST00000551634 MON2Q7Z3U7 1717 aa29.31■■■□□ 2.28
NPAS3-211ENST00000551634 PLEKHM2Q8IWE5 1019 aa29.31■■■□□ 2.28
NPAS3-211ENST00000551634 GSPT1P15170 499 aaKnown RBP29.29■■■□□ 2.28
NPAS3-211ENST00000551634 KNDC1Q76NI1 1749 aa29.29■■■□□ 2.28
NPAS3-211ENST00000551634 RABEP1Q15276 862 aa29.28■■■□□ 2.28
NPAS3-211ENST00000551634 SIRT1Q96EB6 747 aa29.28■■■□□ 2.28
NPAS3-211ENST00000551634 CCDC61Q9Y6R9 512 aa29.27■■■□□ 2.28
NPAS3-211ENST00000551634 TTC22Q5TAA0 569 aa29.27■■■□□ 2.28
NPAS3-211ENST00000551634 RBM42Q9BTD8 480 aaKnown RBP29.27■■■□□ 2.28
NPAS3-211ENST00000551634 GOLGA6L22H0YM25 854 aa29.26■■■□□ 2.27
NPAS3-211ENST00000551634 PRKCSHP14314 528 aaPredicted RBP29.26■■■□□ 2.27
NPAS3-211ENST00000551634 RPAP2Q8IXW5 612 aaPredicted RBP29.26■■■□□ 2.27
NPAS3-211ENST00000551634 ANKRD44Q8N8A2 993 aa29.26■■■□□ 2.27
NPAS3-211ENST00000551634 NUDT16Q96DE0 195 aaKnown RBP29.26■■■□□ 2.27
NPAS3-211ENST00000551634 ZRANB1Q9UGI0 708 aa29.26■■■□□ 2.27
NPAS3-211ENST00000551634 CPS1P31327 1500 aa29.26■■■□□ 2.27
NPAS3-211ENST00000551634 GAS2L2Q8NHY3 880 aa29.25■■■□□ 2.27
NPAS3-211ENST00000551634 C3P01024 1663 aa29.24■■■□□ 2.27
NPAS3-211ENST00000551634 FAM83GA6ND36 823 aa29.24■■■□□ 2.27
NPAS3-211ENST00000551634 NRXN3Q9Y4C0 1643 aa29.24■■■□□ 2.27
NPAS3-211ENST00000551634 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.24■■■□□ 2.27
NPAS3-211ENST00000551634 NRKQ7Z2Y5 1582 aa29.24■■■□□ 2.27
NPAS3-211ENST00000551634 AKAP12Q02952 1782 aa29.23■■■□□ 2.27
NPAS3-211ENST00000551634 RRS1Q15050 365 aaKnown RBP29.23■■■□□ 2.27
NPAS3-211ENST00000551634 ATP10DQ9P241 1426 aa29.23■■■□□ 2.27
NPAS3-211ENST00000551634 KIAA0232Q92628 1395 aa29.22■■■□□ 2.27
NPAS3-211ENST00000551634 FOXD4L1Q9NU39 408 aa29.21■■■□□ 2.27
NPAS3-211ENST00000551634 TECPR2O15040 1411 aa29.21■■■□□ 2.27
NPAS3-211ENST00000551634 IBTKQ9P2D0 1353 aaPredicted RBP29.21■■■□□ 2.27
NPAS3-211ENST00000551634 GAS2L3Q86XJ1 694 aa29.21■■■□□ 2.27
NPAS3-211ENST00000551634 SSFA2P28290 1259 aa29.2■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms