RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 DLG5Q8TDM6 1919 aa18.69■□□□□ 0.58
SCN8A-207ENST00000551216 EIF4A2Q14240 407 aaKnown RBP18.69■□□□□ 0.58
SCN8A-207ENST00000551216 CENPQQ7L2Z9 268 aaPredicted RBP18.69■□□□□ 0.58
SCN8A-207ENST00000551216 TCERG1O14776 1098 aaKnown RBP18.68■□□□□ 0.58
SCN8A-207ENST00000551216 CANXP27824 592 aaKnown RBP18.68■□□□□ 0.58
SCN8A-207ENST00000551216 HMOX1P09601 288 aa18.67■□□□□ 0.58
SCN8A-207ENST00000551216 GNAI1P63096 354 aa18.67■□□□□ 0.58
SCN8A-207ENST00000551216 PHACTR3Q96KR7 559 aa18.67■□□□□ 0.58
SCN8A-207ENST00000551216 IFT57Q9NWB7 429 aa18.67■□□□□ 0.58
SCN8A-207ENST00000551216 MAP3K19Q56UN5 1328 aa18.67■□□□□ 0.58
SCN8A-207ENST00000551216 RTL1A6NKG5 1358 aa18.67■□□□□ 0.58
SCN8A-207ENST00000551216 KDM2BQ8NHM5 1336 aa18.66■□□□□ 0.58
SCN8A-207ENST00000551216 BRPF1P55201 1214 aaPredicted RBP18.66■□□□□ 0.58
SCN8A-207ENST00000551216 NLRP6P59044 892 aa18.66■□□□□ 0.58
SCN8A-207ENST00000551216 ALDH1L2Q3SY69 923 aa18.66■□□□□ 0.58
SCN8A-207ENST00000551216 KDRP35968 1356 aa18.65■□□□□ 0.58
SCN8A-207ENST00000551216 KIF1AQ12756 1690 aa18.65■□□□□ 0.58
SCN8A-207ENST00000551216 ZNF853P0CG23 659 aa18.64■□□□□ 0.57
SCN8A-207ENST00000551216 EXOSC9Q06265 439 aaKnown RBP18.64■□□□□ 0.57
SCN8A-207ENST00000551216 PHRF1Q9P1Y6 1649 aaKnown RBP18.64■□□□□ 0.57
SCN8A-207ENST00000551216 HSP90AB2PQ58FF8 381 aa18.63■□□□□ 0.57
SCN8A-207ENST00000551216 ZKSCAN2Q63HK3 967 aa18.63■□□□□ 0.57
SCN8A-207ENST00000551216 DCCP43146 1447 aa18.63■□□□□ 0.57
SCN8A-207ENST00000551216 SULT6B1Q6IMI4 303 aa18.63■□□□□ 0.57
SCN8A-207ENST00000551216 ABTB2Q8N961 1025 aa18.63■□□□□ 0.57
SCN8A-207ENST00000551216 TSR2Q969E8 191 aaKnown RBP18.63■□□□□ 0.57
SCN8A-207ENST00000551216 KIF16BQ96L93 1317 aa18.63■□□□□ 0.57
SCN8A-207ENST00000551216 AMPHP49418 695 aa18.62■□□□□ 0.57
SCN8A-207ENST00000551216 HAP1P54257 671 aaPredicted RBP18.62■□□□□ 0.57
SCN8A-207ENST00000551216 CFAP44Q96MT7 982 aa18.62■□□□□ 0.57
SCN8A-207ENST00000551216 IPO8O15397 1037 aaKnown RBP18.61■□□□□ 0.57
SCN8A-207ENST00000551216 IGSF1Q8N6C5 1336 aa18.61■□□□□ 0.57
SCN8A-207ENST00000551216 MST1RQ04912 1400 aa18.61■□□□□ 0.57
SCN8A-207ENST00000551216 KCNH5Q8NCM2 988 aa18.6■□□□□ 0.57
SCN8A-207ENST00000551216 CLUAP1Q96AJ1 413 aa18.6■□□□□ 0.57
SCN8A-207ENST00000551216 C19orf44Q9H6X5 657 aa18.6■□□□□ 0.57
SCN8A-207ENST00000551216 FRAT1Q92837 279 aaPredicted RBP18.6■□□□□ 0.57
SCN8A-207ENST00000551216 PSME1Q06323 249 aa18.59■□□□□ 0.57
SCN8A-207ENST00000551216 ESCO1Q5FWF5 840 aa18.59■□□□□ 0.57
SCN8A-207ENST00000551216 C14orf37Q86TY3 774 aa18.59■□□□□ 0.57
SCN8A-207ENST00000551216 SMC4Q9NTJ3 1288 aa18.59■□□□□ 0.57
SCN8A-207ENST00000551216 PROSER2Q86WR7 435 aaPredicted RBP18.58■□□□□ 0.56
SCN8A-207ENST00000551216 NFAT5O94916 1531 aa18.58■□□□□ 0.56
SCN8A-207ENST00000551216 LTN1O94822 1766 aa18.58■□□□□ 0.56
SCN8A-207ENST00000551216 HTATSF1O43719 755 aaKnown RBP18.57■□□□□ 0.56
SCN8A-207ENST00000551216 HOXC9P31274 260 aa18.57■□□□□ 0.56
SCN8A-207ENST00000551216 DZIP1LQ8IYY4 767 aaKnown RBP18.57■□□□□ 0.56
SCN8A-207ENST00000551216 SSH1Q8WYL5 1049 aa18.57■□□□□ 0.56
SCN8A-207ENST00000551216 PANK1Q8TE04 598 aa18.56■□□□□ 0.56
SCN8A-207ENST00000551216 ARHGAP45Q92619 1136 aa18.56■□□□□ 0.56
SCN8A-207ENST00000551216 PAK3O75914 559 aaPredicted RBP18.56■□□□□ 0.56
SCN8A-207ENST00000551216 MVPQ14764 893 aaKnown RBP18.56■□□□□ 0.56
SCN8A-207ENST00000551216 ATF7IPQ6VMQ6 1270 aa18.56■□□□□ 0.56
SCN8A-207ENST00000551216 AEBP1Q8IUX7 1158 aa18.56■□□□□ 0.56
SCN8A-207ENST00000551216 GAS2L2Q8NHY3 880 aa18.56■□□□□ 0.56
SCN8A-207ENST00000551216 COG6Q9Y2V7 657 aa18.56■□□□□ 0.56
SCN8A-207ENST00000551216 TRPM3Q9HCF6 1732 aaPredicted RBP18.55■□□□□ 0.56
SCN8A-207ENST00000551216 SLIT3O75094 1523 aa18.55■□□□□ 0.56
SCN8A-207ENST00000551216 FTSJ3Q8IY81 847 aaKnown RBP18.55■□□□□ 0.56
SCN8A-207ENST00000551216 C1orf167Q5SNV9 1468 aa18.54■□□□□ 0.56
SCN8A-207ENST00000551216 CHMP4BQ9H444 224 aaKnown RBP18.54■□□□□ 0.56
SCN8A-207ENST00000551216 MBIPQ9NS73 344 aa18.54■□□□□ 0.56
SCN8A-207ENST00000551216 KIAA0232Q92628 1395 aa18.54■□□□□ 0.56
SCN8A-207ENST00000551216 VAMP4O75379 141 aa18.53■□□□□ 0.56
SCN8A-207ENST00000551216 IP6K1Q92551 441 aa18.53■□□□□ 0.56
SCN8A-207ENST00000551216 EYA1Q99502 592 aa18.53■□□□□ 0.56
SCN8A-207ENST00000551216 DDX19BQ9UMR2 479 aa18.53■□□□□ 0.56
SCN8A-207ENST00000551216 BCL2L13Q9BXK5 485 aa18.52■□□□□ 0.56
SCN8A-207ENST00000551216 CHL1O00533 1208 aa18.52■□□□□ 0.55
SCN8A-207ENST00000551216 SOX12O15370 315 aa18.52■□□□□ 0.55
SCN8A-207ENST00000551216 TRIM27P14373 513 aa18.52■□□□□ 0.55
SCN8A-207ENST00000551216 RLBP1P12271 317 aa18.51■□□□□ 0.55
SCN8A-207ENST00000551216 LAS1LQ9Y4W2 734 aaKnown RBP18.5■□□□□ 0.55
SCN8A-207ENST00000551216 USP19O94966 1318 aa18.5■□□□□ 0.55
SCN8A-207ENST00000551216 ATF3P18847 181 aa18.49■□□□□ 0.55
SCN8A-207ENST00000551216 THUMPD2Q9BTF0 503 aaKnown RBP18.49■□□□□ 0.55
SCN8A-207ENST00000551216 BABAM1Q9NWV8 329 aa18.49■□□□□ 0.55
SCN8A-207ENST00000551216 NOB1Q9ULX3 412 aaKnown RBP18.49■□□□□ 0.55
SCN8A-207ENST00000551216 STRCP1A6NGW2 1772 aa18.49■□□□□ 0.55
SCN8A-207ENST00000551216 TWISTNBQ3B726 338 aaPredicted RBP18.49■□□□□ 0.55
SCN8A-207ENST00000551216 CADPS2Q86UW7 1296 aa18.49■□□□□ 0.55
SCN8A-207ENST00000551216 RTF1Q92541 710 aaKnown RBP18.49■□□□□ 0.55
SCN8A-207ENST00000551216 RBM33Q96EV2 1170 aaKnown RBP18.49■□□□□ 0.55
SCN8A-207ENST00000551216 CRB1P82279 1406 aa18.48■□□□□ 0.55
SCN8A-207ENST00000551216 LRRC37A3O60309 1634 aa18.48■□□□□ 0.55
SCN8A-207ENST00000551216 TMEM94Q12767 1356 aa18.48■□□□□ 0.55
SCN8A-207ENST00000551216 ALS2Q96Q42 1657 aa18.48■□□□□ 0.55
SCN8A-207ENST00000551216 ORAI2Q96SN7 254 aa18.48■□□□□ 0.55
SCN8A-207ENST00000551216 RWDD1Q9H446 243 aaPredicted RBP18.48■□□□□ 0.55
SCN8A-207ENST00000551216 SOS1Q07889 1333 aaPredicted RBP18.48■□□□□ 0.55
SCN8A-207ENST00000551216 MRPL50Q8N5N7 158 aaKnown RBP18.47■□□□□ 0.55
SCN8A-207ENST00000551216 FAM83GA6ND36 823 aa18.46■□□□□ 0.55
SCN8A-207ENST00000551216 FOXO3O43524 673 aa18.46■□□□□ 0.55
SCN8A-207ENST00000551216 MTHFSDQ2M296 383 aaKnown RBP18.46■□□□□ 0.55
SCN8A-207ENST00000551216 NUTM2GQ5VZR2 741 aa18.46■□□□□ 0.55
SCN8A-207ENST00000551216 NCAPD2Q15021 1401 aa18.46■□□□□ 0.55
SCN8A-207ENST00000551216 KRT28Q7Z3Y7 464 aa18.45■□□□□ 0.54
SCN8A-207ENST00000551216 BACH2Q9BYV9 841 aa18.45■□□□□ 0.54
SCN8A-207ENST00000551216 ARHGEF25Q86VW2 580 aa18.45■□□□□ 0.54
SCN8A-207ENST00000551216 ABCC6O95255 1503 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms