RNA–Protein interactions for RNA: ENST00000549770.1

NPAS3-207, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-207ENST00000549770 SOCS7O14512 581 aa9.17□□□□□ -0.94
NPAS3-207ENST00000549770 ADAMTS2O95450 1211 aa9.17□□□□□ -0.94
NPAS3-207ENST00000549770 C3orf67Q6ZVT6 689 aa9.17□□□□□ -0.94
NPAS3-207ENST00000549770 SLAIN1Q8ND83 568 aa9.17□□□□□ -0.94
NPAS3-207ENST00000549770 PMFBP1Q8TBY8 1022 aa9.17□□□□□ -0.94
NPAS3-207ENST00000549770 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.17□□□□□ -0.94
NPAS3-207ENST00000549770 TRPM1Q7Z4N2 1603 aa9.16□□□□□ -0.94
NPAS3-207ENST00000549770 PRR36Q9H6K5 1346 aa9.16□□□□□ -0.94
NPAS3-207ENST00000549770 C8orf37Q96NL8 207 aa9.16□□□□□ -0.94
NPAS3-207ENST00000549770 BCL11AQ9H165 835 aa9.16□□□□□ -0.94
NPAS3-207ENST00000549770 AFF2P51816 1311 aa9.15□□□□□ -0.94
NPAS3-207ENST00000549770 WASLO00401 505 aaPredicted RBP9.15□□□□□ -0.94
NPAS3-207ENST00000549770 NLRP6P59044 892 aa9.15□□□□□ -0.94
NPAS3-207ENST00000549770 KRT28Q7Z3Y7 464 aa9.15□□□□□ -0.94
NPAS3-207ENST00000549770 CDAN1Q8IWY9 1227 aa9.15□□□□□ -0.94
NPAS3-207ENST00000549770 BOLA1Q9Y3E2 137 aa9.15□□□□□ -0.94
NPAS3-207ENST00000549770 TULP4Q9NRJ4 1543 aa9.15□□□□□ -0.95
NPAS3-207ENST00000549770 QRICH2Q9H0J4 1663 aa9.14□□□□□ -0.95
NPAS3-207ENST00000549770 COL22A1Q8NFW1 1626 aaPredicted RBP9.14□□□□□ -0.95
NPAS3-207ENST00000549770 NBPF8Q3BBV2 869 aa9.14□□□□□ -0.95
NPAS3-207ENST00000549770 LMOD2Q6P5Q4 547 aa9.14□□□□□ -0.95
NPAS3-207ENST00000549770 MS4A4AQ96JQ5 239 aa9.14□□□□□ -0.95
NPAS3-207ENST00000549770 PCGF6Q9BYE7 350 aa9.14□□□□□ -0.95
NPAS3-207ENST00000549770 ANKARQ7Z5J8 1434 aa9.14□□□□□ -0.95
NPAS3-207ENST00000549770 ROCK2O75116 1388 aaKnown RBP9.13□□□□□ -0.95
NPAS3-207ENST00000549770 TONSLQ96HA7 1378 aa9.13□□□□□ -0.95
NPAS3-207ENST00000549770 SPATA31A3Q5VYP0 1347 aa9.13□□□□□ -0.95
NPAS3-207ENST00000549770 PSME1Q06323 249 aa9.13□□□□□ -0.95
NPAS3-207ENST00000549770 HS6ST3Q8IZP7 471 aa9.13□□□□□ -0.95
NPAS3-207ENST00000549770 CDK19Q9BWU1 502 aa9.13□□□□□ -0.95
NPAS3-207ENST00000549770 MFRPQ9BY79 579 aa9.13□□□□□ -0.95
NPAS3-207ENST00000549770 CENPJQ9HC77 1338 aaPredicted RBP9.12□□□□□ -0.95
NPAS3-207ENST00000549770 ITSN1Q15811 1721 aa9.12□□□□□ -0.95
NPAS3-207ENST00000549770 ZNF772Q68DY9 489 aaPredicted RBP9.12□□□□□ -0.95
NPAS3-207ENST00000549770 CABLES1Q8TDN4 633 aa9.12□□□□□ -0.95
NPAS3-207ENST00000549770 NUDT16Q96DE0 195 aaKnown RBP9.12□□□□□ -0.95
NPAS3-207ENST00000549770 NGLY1Q96IV0 654 aa9.12□□□□□ -0.95
NPAS3-207ENST00000549770 ATP7BP35670 1465 aa9.12□□□□□ -0.95
NPAS3-207ENST00000549770 TNS3Q68CZ2 1445 aa9.12□□□□□ -0.95
NPAS3-207ENST00000549770 EIF3AQ14152 1382 aaKnown RBP9.12□□□□□ -0.95
NPAS3-207ENST00000549770 TRPM3Q9HCF6 1732 aaPredicted RBP9.11□□□□□ -0.95
NPAS3-207ENST00000549770 MARF1Q9Y4F3 1742 aaKnown RBP9.11□□□□□ -0.95
NPAS3-207ENST00000549770 NGDNQ8NEJ9 315 aaKnown RBP9.11□□□□□ -0.95
NPAS3-207ENST00000549770 TOPAZ1Q8N9V7 1692 aa9.1□□□□□ -0.95
NPAS3-207ENST00000549770 HAP1P54257 671 aaPredicted RBP9.1□□□□□ -0.95
NPAS3-207ENST00000549770 SRPK2P78362 688 aaKnown RBP9.1□□□□□ -0.95
NPAS3-207ENST00000549770 FBXO22Q8NEZ5 403 aa9.1□□□□□ -0.95
NPAS3-207ENST00000549770 ABCA3Q99758 1704 aa9.1□□□□□ -0.95
NPAS3-207ENST00000549770 GPRASP1Q5JY77 1395 aa9.1□□□□□ -0.95
NPAS3-207ENST00000549770 QTRT2Q9H974 415 aaKnown RBP9.09□□□□□ -0.95
NPAS3-207ENST00000549770 DAXXQ9UER7 740 aaPredicted RBP9.09□□□□□ -0.95
NPAS3-207ENST00000549770 ALS2Q96Q42 1657 aa9.09□□□□□ -0.95
NPAS3-207ENST00000549770 SBNO1A3KN83 1393 aa9.09□□□□□ -0.95
NPAS3-207ENST00000549770 RXRBP28702 533 aa9.08□□□□□ -0.96
NPAS3-207ENST00000549770 NUTM2GQ5VZR2 741 aa9.08□□□□□ -0.96
NPAS3-207ENST00000549770 CARD11Q9BXL7 1154 aa9.08□□□□□ -0.96
NPAS3-207ENST00000549770 USP21Q9UK80 565 aa9.08□□□□□ -0.96
NPAS3-207ENST00000549770 EP400Q96L91 3159 aa9.08□□□□□ -0.96
NPAS3-207ENST00000549770 ACEP12821 1306 aa9.07□□□□□ -0.96
NPAS3-207ENST00000549770 PPIP5K1Q6PFW1 1433 aa9.07□□□□□ -0.96
NPAS3-207ENST00000549770 MICALL2Q8IY33 904 aa9.07□□□□□ -0.96
NPAS3-207ENST00000549770 ARHGEF10O15013 1369 aa9.07□□□□□ -0.96
NPAS3-207ENST00000549770 RALGAPBQ86X10 1494 aa9.07□□□□□ -0.96
NPAS3-207ENST00000549770 ST18O60284 1047 aa9.06□□□□□ -0.96
NPAS3-207ENST00000549770 FNBP4Q8N3X1 1017 aaPredicted RBP9.06□□□□□ -0.96
NPAS3-207ENST00000549770 TMEM121BQ9BXQ6 578 aaPredicted RBP9.06□□□□□ -0.96
NPAS3-207ENST00000549770 PLCH1Q4KWH8 1693 aa9.06□□□□□ -0.96
NPAS3-207ENST00000549770 CRYBG1Q9Y4K1 1723 aa9.05□□□□□ -0.96
NPAS3-207ENST00000549770 BCL9LQ86UU0 1499 aa9.05□□□□□ -0.96
NPAS3-207ENST00000549770 CABP1Q9NZU7 370 aa9.05□□□□□ -0.96
NPAS3-207ENST00000549770 RGS12O14924 1447 aa9.05□□□□□ -0.96
NPAS3-207ENST00000549770 EVC2Q86UK5 1308 aa9.05□□□□□ -0.96
NPAS3-207ENST00000549770 POLR3AO14802 1390 aaPredicted RBP9.04□□□□□ -0.96
NPAS3-207ENST00000549770 PLEKHG3A1L390 1219 aa9.04□□□□□ -0.96
NPAS3-207ENST00000549770 RBM6P78332 1123 aaKnown RBP9.04□□□□□ -0.96
NPAS3-207ENST00000549770 TRPC5Q9UL62 973 aaPredicted RBP9.04□□□□□ -0.96
NPAS3-207ENST00000549770 ATRNO75882 1429 aa9.04□□□□□ -0.96
NPAS3-207ENST00000549770 PHRF1Q9P1Y6 1649 aaKnown RBP9.03□□□□□ -0.96
NPAS3-207ENST00000549770 SLIT2O94813 1529 aa9.03□□□□□ -0.96
NPAS3-207ENST00000549770 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.02□□□□□ -0.96
NPAS3-207ENST00000549770 FAM83GA6ND36 823 aa9.02□□□□□ -0.97
NPAS3-207ENST00000549770 UNC5CLQ8IV45 518 aa9.02□□□□□ -0.97
NPAS3-207ENST00000549770 ABTB2Q8N961 1025 aa9.02□□□□□ -0.97
NPAS3-207ENST00000549770 CCER1Q8TC90 406 aaPredicted RBP9.02□□□□□ -0.97
NPAS3-207ENST00000549770 CCDC9Q9Y3X0 531 aaKnown RBP9.02□□□□□ -0.97
NPAS3-207ENST00000549770 CDK12Q9NYV4 1490 aaPredicted RBP9.02□□□□□ -0.97
NPAS3-207ENST00000549770 GLI3P10071 1580 aa9.01□□□□□ -0.97
NPAS3-207ENST00000549770 ZC3H6P61129 1189 aaKnown RBP9.01□□□□□ -0.97
NPAS3-207ENST00000549770 CHRNA2Q15822 529 aa9.01□□□□□ -0.97
NPAS3-207ENST00000549770 NRAPQ86VF7 1730 aa9.01□□□□□ -0.97
NPAS3-207ENST00000549770 BTG4Q9NY30 223 aa9.01□□□□□ -0.97
NPAS3-207ENST00000549770 NWD2Q9ULI1 1742 aa9.01□□□□□ -0.97
NPAS3-207ENST00000549770 AKAP12Q02952 1782 aa9.01□□□□□ -0.97
NPAS3-207ENST00000549770 COL14A1Q05707 1796 aaKnown RBP9.01□□□□□ -0.97
NPAS3-207ENST00000549770 KIAA0232Q92628 1395 aa9□□□□□ -0.97
NPAS3-207ENST00000549770 USP6P35125 1406 aa9□□□□□ -0.97
NPAS3-207ENST00000549770 ST20-MTHFSA0A0A6YYL1 179 aa9□□□□□ -0.97
NPAS3-207ENST00000549770 ZBTB7CA1YPR0 619 aa9□□□□□ -0.97
NPAS3-207ENST00000549770 SNPHO15079 494 aa9□□□□□ -0.97
NPAS3-207ENST00000549770 CENPBP07199 599 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms