RNA–Protein interactions for RNA: ENST00000549015.1

LGR5-205, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-205ENST00000549015 CEP152O94986 1710 aa2.28□□□□□ -2.05
LGR5-205ENST00000549015 SPHKAPQ2M3C7 1700 aa2.28□□□□□ -2.05
LGR5-205ENST00000549015 SETBP1Q9Y6X0 1596 aa2.27□□□□□ -2.05
LGR5-205ENST00000549015 ADGRB3O60242 1522 aa2.27□□□□□ -2.05
LGR5-205ENST00000549015 SCAF11Q99590 1463 aaKnown RBP2.27□□□□□ -2.05
LGR5-205ENST00000549015 POM121CA8CG34 1229 aa2.27□□□□□ -2.05
LGR5-205ENST00000549015 ATMINO43313 823 aaPredicted RBP2.27□□□□□ -2.05
LGR5-205ENST00000549015 CSB-PGBD3P0DP91 1061 aa2.27□□□□□ -2.05
LGR5-205ENST00000549015 HSPA5P11021 654 aaKnown RBP2.27□□□□□ -2.05
LGR5-205ENST00000549015 RFX1P22670 979 aa2.27□□□□□ -2.05
LGR5-205ENST00000549015 CDCA8Q53HL2 280 aa2.27□□□□□ -2.05
LGR5-205ENST00000549015 HDGFL1Q5TGJ6 251 aa2.27□□□□□ -2.05
LGR5-205ENST00000549015 SULF1Q8IWU6 871 aa2.27□□□□□ -2.05
LGR5-205ENST00000549015 RBM46Q8TBY0 533 aaKnown RBP2.27□□□□□ -2.05
LGR5-205ENST00000549015 CERKQ8TCT0 537 aa2.27□□□□□ -2.05
LGR5-205ENST00000549015 PXYLP1Q8TE99 480 aa2.27□□□□□ -2.05
LGR5-205ENST00000549015 SPIRE2Q8WWL2 714 aa2.27□□□□□ -2.05
LGR5-205ENST00000549015 PRKRIP1Q9H875 184 aaPredicted RBP2.27□□□□□ -2.05
LGR5-205ENST00000549015 ANO8Q9HCE9 1232 aaPredicted RBP2.27□□□□□ -2.05
LGR5-205ENST00000549015 TBC1D2BQ9UPU7 963 aa2.27□□□□□ -2.05
LGR5-205ENST00000549015 MYO3AQ8NEV4 1616 aa2.27□□□□□ -2.05
LGR5-205ENST00000549015 MAP3K4Q9Y6R4 1608 aa2.27□□□□□ -2.05
LGR5-205ENST00000549015 FRMPD1Q5SYB0 1578 aa2.27□□□□□ -2.05
LGR5-205ENST00000549015 UGGT1Q9NYU2 1555 aa2.27□□□□□ -2.05
LGR5-205ENST00000549015 AGLP35573 1532 aa2.27□□□□□ -2.05
LGR5-205ENST00000549015 ZFYVE9O95405 1425 aa2.26□□□□□ -2.05
LGR5-205ENST00000549015 CD109Q6YHK3 1445 aa2.26□□□□□ -2.05
LGR5-205ENST00000549015 KIDINS220Q9ULH0 1771 aa2.26□□□□□ -2.05
LGR5-205ENST00000549015 BRD4O60885 1362 aaPredicted RBP2.26□□□□□ -2.05
LGR5-205ENST00000549015 NPC1L1Q9UHC9 1359 aa2.26□□□□□ -2.05
LGR5-205ENST00000549015 KIF7Q2M1P5 1343 aa2.26□□□□□ -2.05
LGR5-205ENST00000549015 ZBED9Q6R2W3 1325 aa2.26□□□□□ -2.05
LGR5-205ENST00000549015 IQGAP1P46940 1657 aa2.26□□□□□ -2.05
LGR5-205ENST00000549015 DDX11L8A8MPP1 907 aa2.26□□□□□ -2.05
LGR5-205ENST00000549015 E9PSI1 815 aa2.26□□□□□ -2.05
LGR5-205ENST00000549015 HAX1O00165 279 aa2.26□□□□□ -2.05
LGR5-205ENST00000549015 NEFLP07196 543 aa2.26□□□□□ -2.05
LGR5-205ENST00000549015 HNRNPMP52272 730 aaKnown RBP eCLIP2.26□□□□□ -2.05
LGR5-205ENST00000549015 DDX10Q13206 875 aaKnown RBP2.26□□□□□ -2.05
LGR5-205ENST00000549015 RALBP1Q15311 655 aa2.26□□□□□ -2.05
LGR5-205ENST00000549015 NBPF8Q3BBV2 869 aa2.26□□□□□ -2.05
LGR5-205ENST00000549015 C6orf132Q5T0Z8 1188 aa2.26□□□□□ -2.05
LGR5-205ENST00000549015 FBXO31Q5XUX0 539 aaPredicted RBP2.26□□□□□ -2.05
LGR5-205ENST00000549015 PPP2R2DQ66LE6 453 aa2.26□□□□□ -2.05
LGR5-205ENST00000549015 RSBN1LQ6PCB5 846 aaPredicted RBP2.26□□□□□ -2.05
LGR5-205ENST00000549015 ZNF710Q8N1W2 664 aa2.26□□□□□ -2.05
LGR5-205ENST00000549015 PBXIP1Q96AQ6 731 aa2.26□□□□□ -2.05
LGR5-205ENST00000549015 ZNF428Q96B54 188 aa2.26□□□□□ -2.05
LGR5-205ENST00000549015 CARD11Q9BXL7 1154 aa2.26□□□□□ -2.05
LGR5-205ENST00000549015 PCDHGA4Q9Y5G9 962 aa2.26□□□□□ -2.05
LGR5-205ENST00000549015 DIP2CQ9Y2E4 1556 aa2.26□□□□□ -2.05
LGR5-205ENST00000549015 ABCC3O15438 1527 aa2.26□□□□□ -2.05
LGR5-205ENST00000549015 PIK3C2GO75747 1445 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 NOS1P29475 1434 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 IFT172Q9UG01 1749 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 LRPPRCP42704 1394 aaKnown RBP2.25□□□□□ -2.05
LGR5-205ENST00000549015 PARD3Q8TEW0 1356 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 NINLQ9Y2I6 1382 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 PPRC1Q5VV67 1664 aaKnown RBP2.25□□□□□ -2.05
LGR5-205ENST00000549015 PIK3C2BO00750 1634 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 CLTCL1P53675 1640 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 CAMSAP1Q5T5Y3 1602 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 ABCA6Q8N139 1617 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 RPGRIP1LQ68CZ1 1315 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 MYBBP1AQ9BQG0 1328 aaKnown RBP2.25□□□□□ -2.05
LGR5-205ENST00000549015 DIP2BQ9P265 1576 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.25□□□□□ -2.05
LGR5-205ENST00000549015 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.25□□□□□ -2.05
LGR5-205ENST00000549015 RCCD1A6NED2 376 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 MOXD2PA6NHM9 499 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 SPTLC1O15269 473 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 SLC34A2O95436 690 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 BRD1O95696 1058 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 USP17L8P0C7I0 530 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 NDUFV2P19404 249 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 CLCN6P51797 869 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 PRSS12P56730 875 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 KCNA1Q09470 495 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 QPCTQ16769 361 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 ASTLQ6HA08 431 aaPredicted RBP2.25□□□□□ -2.05
LGR5-205ENST00000549015 ZNF454Q8N9F8 522 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 RDH13Q8NBN7 331 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 TSC1Q92574 1164 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 ZDHHC16Q969W1 377 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 CDCA7LQ96GN5 454 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 YTHDC1Q96MU7 727 aaKnown RBP2.25□□□□□ -2.05
LGR5-205ENST00000549015 PUS7Q96PZ0 661 aaKnown RBP2.25□□□□□ -2.05
LGR5-205ENST00000549015 COLQQ9Y215 455 aaPredicted RBP2.25□□□□□ -2.05
LGR5-205ENST00000549015 NDUFB9Q9Y6M9 179 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 ARHGEF40Q8TER5 1519 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 BLMP54132 1417 aaPredicted RBP2.25□□□□□ -2.05
LGR5-205ENST00000549015 NPATQ14207 1427 aa2.25□□□□□ -2.05
LGR5-205ENST00000549015 USP32Q8NFA0 1604 aa2.24□□□□□ -2.05
LGR5-205ENST00000549015 ASXL1Q8IXJ9 1541 aa2.24□□□□□ -2.05
LGR5-205ENST00000549015 CARNS1A5YM72 827 aa2.24□□□□□ -2.05
LGR5-205ENST00000549015 LILRB3O75022 631 aa2.24□□□□□ -2.05
LGR5-205ENST00000549015 CD46P15529 392 aa2.24□□□□□ -2.05
LGR5-205ENST00000549015 LMOD1P29536 600 aaPredicted RBP2.24□□□□□ -2.05
LGR5-205ENST00000549015 FOSBP53539 338 aa2.24□□□□□ -2.05
LGR5-205ENST00000549015 TMF1P82094 1093 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms