RNA–Protein interactions for RNA: ENST00000547034.5

TMTC3-202, Transcript of transmembrane and tetratricopeptide repeat containing 3, humanhuman

TSL 1 (best)

Gene TMTC3, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC3-202ENST00000547034 ARHGEF10O15013 1369 aa22.17■■□□□ 1.14
TMTC3-202ENST00000547034 EXOSC9Q06265 439 aaKnown RBP22.17■■□□□ 1.14
TMTC3-202ENST00000547034 AAMPQ13685 434 aa22.17■■□□□ 1.14
TMTC3-202ENST00000547034 CENPQQ7L2Z9 268 aaPredicted RBP22.17■■□□□ 1.14
TMTC3-202ENST00000547034 LMOD3Q0VAK6 560 aa22.16■■□□□ 1.14
TMTC3-202ENST00000547034 PHF8Q9UPP1 1060 aa22.16■■□□□ 1.14
TMTC3-202ENST00000547034 TCERG1O14776 1098 aaKnown RBP22.15■■□□□ 1.14
TMTC3-202ENST00000547034 HSP90AB2PQ58FF8 381 aa22.15■■□□□ 1.14
TMTC3-202ENST00000547034 ZNF853P0CG23 659 aa22.14■■□□□ 1.13
TMTC3-202ENST00000547034 CANXP27824 592 aaKnown RBP22.14■■□□□ 1.13
TMTC3-202ENST00000547034 IFT57Q9NWB7 429 aa22.13■■□□□ 1.13
TMTC3-202ENST00000547034 KDRP35968 1356 aa22.13■■□□□ 1.13
TMTC3-202ENST00000547034 PANK1Q8TE04 598 aa22.13■■□□□ 1.13
TMTC3-202ENST00000547034 ZNF428Q96B54 188 aa22.13■■□□□ 1.13
TMTC3-202ENST00000547034 MS4A1P11836 297 aa22.11■■□□□ 1.13
TMTC3-202ENST00000547034 NLRP6P59044 892 aa22.11■■□□□ 1.13
TMTC3-202ENST00000547034 SULT6B1Q6IMI4 303 aa22.11■■□□□ 1.13
TMTC3-202ENST00000547034 AEBP1Q8IUX7 1158 aa22.11■■□□□ 1.13
TMTC3-202ENST00000547034 FRAT1Q92837 279 aaPredicted RBP22.11■■□□□ 1.13
TMTC3-202ENST00000547034 GNAI1P63096 354 aa22.1■■□□□ 1.13
TMTC3-202ENST00000547034 ALDH1L2Q3SY69 923 aa22.1■■□□□ 1.13
TMTC3-202ENST00000547034 BCL2L13Q9BXK5 485 aa22.1■■□□□ 1.13
TMTC3-202ENST00000547034 RTL1A6NKG5 1358 aa22.09■■□□□ 1.13
TMTC3-202ENST00000547034 RLBP1P12271 317 aa22.09■■□□□ 1.13
TMTC3-202ENST00000547034 BRPF1P55201 1214 aaPredicted RBP22.09■■□□□ 1.13
TMTC3-202ENST00000547034 ZKSCAN2Q63HK3 967 aa22.09■■□□□ 1.13
TMTC3-202ENST00000547034 SSH1Q8WYL5 1049 aa22.09■■□□□ 1.13
TMTC3-202ENST00000547034 CLUAP1Q96AJ1 413 aa22.09■■□□□ 1.13
TMTC3-202ENST00000547034 PHRF1Q9P1Y6 1649 aaKnown RBP22.09■■□□□ 1.13
TMTC3-202ENST00000547034 COG6Q9Y2V7 657 aa22.09■■□□□ 1.13
TMTC3-202ENST00000547034 NFAT5O94916 1531 aa22.08■■□□□ 1.13
TMTC3-202ENST00000547034 IGSF1Q8N6C5 1336 aa22.08■■□□□ 1.13
TMTC3-202ENST00000547034 SMC4Q9NTJ3 1288 aa22.08■■□□□ 1.12
TMTC3-202ENST00000547034 LTN1O94822 1766 aa22.07■■□□□ 1.12
TMTC3-202ENST00000547034 CFAP44Q96MT7 982 aa22.07■■□□□ 1.12
TMTC3-202ENST00000547034 KIF1AQ12756 1690 aa22.07■■□□□ 1.12
TMTC3-202ENST00000547034 ABTB2Q8N961 1025 aa22.06■■□□□ 1.12
TMTC3-202ENST00000547034 RBM33Q96EV2 1170 aaKnown RBP22.06■■□□□ 1.12
TMTC3-202ENST00000547034 THUMPD2Q9BTF0 503 aaKnown RBP22.06■■□□□ 1.12
TMTC3-202ENST00000547034 AMPHP49418 695 aa22.06■■□□□ 1.12
TMTC3-202ENST00000547034 TNNQ9UQP3 1299 aa22.06■■□□□ 1.12
TMTC3-202ENST00000547034 KIF16BQ96L93 1317 aa22.05■■□□□ 1.12
TMTC3-202ENST00000547034 TRPM3Q9HCF6 1732 aaPredicted RBP22.05■■□□□ 1.12
TMTC3-202ENST00000547034 SOX12O15370 315 aa22.05■■□□□ 1.12
TMTC3-202ENST00000547034 HOXC9P31274 260 aa22.04■■□□□ 1.12
TMTC3-202ENST00000547034 MBIPQ9NS73 344 aa22.04■■□□□ 1.12
TMTC3-202ENST00000547034 MVPQ14764 893 aaKnown RBP22.03■■□□□ 1.12
TMTC3-202ENST00000547034 DZIP1LQ8IYY4 767 aaKnown RBP22.03■■□□□ 1.12
TMTC3-202ENST00000547034 NCOA3Q9Y6Q9 1424 aa22.03■■□□□ 1.12
TMTC3-202ENST00000547034 STRCP1A6NGW2 1772 aa22.03■■□□□ 1.12
TMTC3-202ENST00000547034 ESCO1Q5FWF5 840 aa22.03■■□□□ 1.12
TMTC3-202ENST00000547034 TRIM27P14373 513 aa22.02■■□□□ 1.12
TMTC3-202ENST00000547034 ATF7IPQ6VMQ6 1270 aa22.02■■□□□ 1.12
TMTC3-202ENST00000547034 AEBP2Q6ZN18 517 aaPredicted RBP22.02■■□□□ 1.12
TMTC3-202ENST00000547034 MST1RQ04912 1400 aa22.02■■□□□ 1.11
TMTC3-202ENST00000547034 SLIT3O75094 1523 aa22.01■■□□□ 1.11
TMTC3-202ENST00000547034 VAMP4O75379 141 aa22.01■■□□□ 1.11
TMTC3-202ENST00000547034 EYA1Q99502 592 aa22.01■■□□□ 1.11
TMTC3-202ENST00000547034 FAM83GA6ND36 823 aa22.01■■□□□ 1.11
TMTC3-202ENST00000547034 PAK3O75914 559 aaPredicted RBP22.01■■□□□ 1.11
TMTC3-202ENST00000547034 C1orf167Q5SNV9 1468 aa22.01■■□□□ 1.11
TMTC3-202ENST00000547034 DCCP43146 1447 aa22■■□□□ 1.11
TMTC3-202ENST00000547034 PROSER2Q86WR7 435 aaPredicted RBP22■■□□□ 1.11
TMTC3-202ENST00000547034 LRRC37A3O60309 1634 aa22■■□□□ 1.11
TMTC3-202ENST00000547034 IPO8O15397 1037 aaKnown RBP21.99■■□□□ 1.11
TMTC3-202ENST00000547034 NUTM2GQ5VZR2 741 aa21.99■■□□□ 1.11
TMTC3-202ENST00000547034 C14orf37Q86TY3 774 aa21.99■■□□□ 1.11
TMTC3-202ENST00000547034 LAS1LQ9Y4W2 734 aaKnown RBP21.99■■□□□ 1.11
TMTC3-202ENST00000547034 IGHDP01880 384 aa21.99■■□□□ 1.11
TMTC3-202ENST00000547034 PSME1Q06323 249 aa21.99■■□□□ 1.11
TMTC3-202ENST00000547034 C19orf44Q9H6X5 657 aa21.99■■□□□ 1.11
TMTC3-202ENST00000547034 NOB1Q9ULX3 412 aaKnown RBP21.99■■□□□ 1.11
TMTC3-202ENST00000547034 CRB1P82279 1406 aa21.98■■□□□ 1.11
TMTC3-202ENST00000547034 FTSJ3Q8IY81 847 aaKnown RBP21.98■■□□□ 1.11
TMTC3-202ENST00000547034 CHL1O00533 1208 aa21.96■■□□□ 1.11
TMTC3-202ENST00000547034 DCTN1Q14203 1278 aa21.96■■□□□ 1.11
TMTC3-202ENST00000547034 TSPYL6Q8N831 410 aa21.96■■□□□ 1.11
TMTC3-202ENST00000547034 KCNH5Q8NCM2 988 aa21.96■■□□□ 1.11
TMTC3-202ENST00000547034 ARHGAP45Q92619 1136 aa21.96■■□□□ 1.11
TMTC3-202ENST00000547034 ORAI2Q96SN7 254 aa21.96■■□□□ 1.11
TMTC3-202ENST00000547034 MRPL50Q8N5N7 158 aaKnown RBP21.96■■□□□ 1.11
TMTC3-202ENST00000547034 IP6K1Q92551 441 aa21.96■■□□□ 1.11
TMTC3-202ENST00000547034 BACH2Q9BYV9 841 aa21.96■■□□□ 1.11
TMTC3-202ENST00000547034 KIAA0232Q92628 1395 aa21.95■■□□□ 1.11
TMTC3-202ENST00000547034 PDE4AP27815 886 aa21.95■■□□□ 1.1
TMTC3-202ENST00000547034 MTHFSDQ2M296 383 aaKnown RBP21.95■■□□□ 1.1
TMTC3-202ENST00000547034 DDX19BQ9UMR2 479 aa21.95■■□□□ 1.1
TMTC3-202ENST00000547034 PCDHB15Q9Y5E8 787 aa21.95■■□□□ 1.1
TMTC3-202ENST00000547034 ALS2Q96Q42 1657 aa21.95■■□□□ 1.1
TMTC3-202ENST00000547034 TWISTNBQ3B726 338 aaPredicted RBP21.94■■□□□ 1.1
TMTC3-202ENST00000547034 GAS2L2Q8NHY3 880 aa21.94■■□□□ 1.1
TMTC3-202ENST00000547034 HTATSF1O43719 755 aaKnown RBP21.94■■□□□ 1.1
TMTC3-202ENST00000547034 SKAP1Q86WV1 359 aa21.94■■□□□ 1.1
TMTC3-202ENST00000547034 USP19O94966 1318 aa21.94■■□□□ 1.1
TMTC3-202ENST00000547034 C8orf58Q8NAV2 365 aa21.93■■□□□ 1.1
TMTC3-202ENST00000547034 TMEM94Q12767 1356 aa21.92■■□□□ 1.1
TMTC3-202ENST00000547034 MCM10Q7L590 875 aa21.91■■□□□ 1.1
TMTC3-202ENST00000547034 NCAPD2Q15021 1401 aa21.9■■□□□ 1.1
TMTC3-202ENST00000547034 FOXO3O43524 673 aa21.9■■□□□ 1.1
TMTC3-202ENST00000547034 TMEM57Q8N5G2 664 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms