RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 TWISTNBQ3B726 338 aaPredicted RBP16.18■□□□□ 0.18
SCAF11-209ENST00000547018 LNPKQ9C0E8 428 aa16.18■□□□□ 0.18
SCAF11-209ENST00000547018 RWDD1Q9H446 243 aaPredicted RBP16.18■□□□□ 0.18
SCAF11-209ENST00000547018 SPATA31D1Q6ZQQ2 1576 aa16.17■□□□□ 0.18
SCAF11-209ENST00000547018 SLC4A10Q6U841 1118 aa16.17■□□□□ 0.18
SCAF11-209ENST00000547018 RTL5Q5HYW3 569 aaPredicted RBP16.16■□□□□ 0.18
SCAF11-209ENST00000547018 SHPRHQ149N8 1683 aa16.16■□□□□ 0.18
SCAF11-209ENST00000547018 MAP3K19Q56UN5 1328 aa16.16■□□□□ 0.18
SCAF11-209ENST00000547018 EDC4Q6P2E9 1401 aaKnown RBP16.16■□□□□ 0.18
SCAF11-209ENST00000547018 C8orf34Q49A92 452 aa16.15■□□□□ 0.18
SCAF11-209ENST00000547018 ADAMTS13Q76LX8 1427 aa16.15■□□□□ 0.18
SCAF11-209ENST00000547018 PSME1Q06323 249 aa16.15■□□□□ 0.18
SCAF11-209ENST00000547018 RTF1Q92541 710 aaKnown RBP16.15■□□□□ 0.18
SCAF11-209ENST00000547018 IPO8O15397 1037 aaKnown RBP16.14■□□□□ 0.18
SCAF11-209ENST00000547018 GNAI1P63096 354 aa16.14■□□□□ 0.18
SCAF11-209ENST00000547018 PTPRUQ92729 1446 aa16.14■□□□□ 0.17
SCAF11-209ENST00000547018 NLRP1Q9C000 1473 aa16.14■□□□□ 0.17
SCAF11-209ENST00000547018 ANKLE2Q86XL3 938 aa16.14■□□□□ 0.17
SCAF11-209ENST00000547018 MAP2P11137 1827 aaKnown RBP16.13■□□□□ 0.17
SCAF11-209ENST00000547018 VAMP4O75379 141 aa16.12■□□□□ 0.17
SCAF11-209ENST00000547018 DDX19BQ9UMR2 479 aa16.12■□□□□ 0.17
SCAF11-209ENST00000547018 TBX22Q9Y458 520 aa16.12■□□□□ 0.17
SCAF11-209ENST00000547018 MFAP1P55081 439 aaKnown RBP16.11■□□□□ 0.17
SCAF11-209ENST00000547018 ANKRD45Q5TZF3 282 aa16.11■□□□□ 0.17
SCAF11-209ENST00000547018 IQSEC2Q5JU85 1478 aa16.11■□□□□ 0.17
SCAF11-209ENST00000547018 DDX17Q92841 729 aaKnown RBP16.11■□□□□ 0.17
SCAF11-209ENST00000547018 SLKQ9H2G2 1235 aaPredicted RBP16.11■□□□□ 0.17
SCAF11-209ENST00000547018 ORAI2Q96SN7 254 aa16.1■□□□□ 0.17
SCAF11-209ENST00000547018 EYA1Q99502 592 aa16.1■□□□□ 0.17
SCAF11-209ENST00000547018 CPSF1Q10570 1443 aaKnown RBP16.1■□□□□ 0.17
SCAF11-209ENST00000547018 MTHFSDQ2M296 383 aaKnown RBP16.1■□□□□ 0.17
SCAF11-209ENST00000547018 TSPYL4Q9UJ04 414 aa16.1■□□□□ 0.17
SCAF11-209ENST00000547018 F6X3S4 739 aa16.09■□□□□ 0.17
SCAF11-209ENST00000547018 PNPLA6Q8IY17 1366 aa16.09■□□□□ 0.17
SCAF11-209ENST00000547018 PLEKHG1Q9ULL1 1385 aa16.09■□□□□ 0.17
SCAF11-209ENST00000547018 LRRC7Q96NW7 1537 aa16.09■□□□□ 0.17
SCAF11-209ENST00000547018 ATP7BP35670 1465 aa16.08■□□□□ 0.17
SCAF11-209ENST00000547018 KIF16BQ96L93 1317 aa16.08■□□□□ 0.16
SCAF11-209ENST00000547018 PLEKHG3A1L390 1219 aa16.08■□□□□ 0.16
SCAF11-209ENST00000547018 CALD1Q05682 793 aaKnown RBP16.08■□□□□ 0.16
SCAF11-209ENST00000547018 PHF8Q9UPP1 1060 aa16.08■□□□□ 0.16
SCAF11-209ENST00000547018 COL3A1P02461 1466 aaPredicted RBP16.08■□□□□ 0.16
SCAF11-209ENST00000547018 CFAP44Q96MT7 982 aa16.07■□□□□ 0.16
SCAF11-209ENST00000547018 SLC4A2P04920 1241 aa16.07■□□□□ 0.16
SCAF11-209ENST00000547018 LMOD3Q0VAK6 560 aa16.07■□□□□ 0.16
SCAF11-209ENST00000547018 EIF2S2P20042 333 aaKnown RBP16.07■□□□□ 0.16
SCAF11-209ENST00000547018 LRRC59Q96AG4 307 aaKnown RBP16.07■□□□□ 0.16
SCAF11-209ENST00000547018 HSPA2P54652 639 aa16.06■□□□□ 0.16
SCAF11-209ENST00000547018 PROSER2Q86WR7 435 aaPredicted RBP16.06■□□□□ 0.16
SCAF11-209ENST00000547018 IFT57Q9NWB7 429 aa16.06■□□□□ 0.16
SCAF11-209ENST00000547018 ZC3H6P61129 1189 aaKnown RBP16.06■□□□□ 0.16
SCAF11-209ENST00000547018 NRXN3Q9Y4C0 1643 aa16.05■□□□□ 0.16
SCAF11-209ENST00000547018 MRPL50Q8N5N7 158 aaKnown RBP16.05■□□□□ 0.16
SCAF11-209ENST00000547018 UPF2Q9HAU5 1272 aaKnown RBP16.05■□□□□ 0.16
SCAF11-209ENST00000547018 FAM135BQ49AJ0 1406 aa16.04■□□□□ 0.16
SCAF11-209ENST00000547018 USP6P35125 1406 aa16.04■□□□□ 0.16
SCAF11-209ENST00000547018 IL16Q14005 1332 aa16.03■□□□□ 0.16
SCAF11-209ENST00000547018 G2E3Q7L622 706 aa16.03■□□□□ 0.16
SCAF11-209ENST00000547018 SIRT1Q96EB6 747 aa16.03■□□□□ 0.16
SCAF11-209ENST00000547018 ZBTB40Q9NUA8 1239 aa16.03■□□□□ 0.16
SCAF11-209ENST00000547018 DDRGK1Q96HY6 314 aa16.02■□□□□ 0.16
SCAF11-209ENST00000547018 ANXA1P04083 346 aa16.02■□□□□ 0.15
SCAF11-209ENST00000547018 REREQ9P2R6 1566 aa16.01■□□□□ 0.15
SCAF11-209ENST00000547018 ARXQ96QS3 562 aa16.01■□□□□ 0.15
SCAF11-209ENST00000547018 CT47B1P0C2W7 299 aaPredicted RBP16.01■□□□□ 0.15
SCAF11-209ENST00000547018 DEKP35659 375 aaKnown RBP16.01■□□□□ 0.15
SCAF11-209ENST00000547018 CABLES1Q8TDN4 633 aa16.01■□□□□ 0.15
SCAF11-209ENST00000547018 DLC1Q96QB1 1528 aa16■□□□□ 0.15
SCAF11-209ENST00000547018 HOXC9P31274 260 aa16■□□□□ 0.15
SCAF11-209ENST00000547018 UBR1Q8IWV7 1749 aa16■□□□□ 0.15
SCAF11-209ENST00000547018 SIPA1L2Q9P2F8 1722 aaPredicted RBP16■□□□□ 0.15
SCAF11-209ENST00000547018 USP32Q8NFA0 1604 aa15.99■□□□□ 0.15
SCAF11-209ENST00000547018 SMARCA5O60264 1052 aaPredicted RBP15.99■□□□□ 0.15
SCAF11-209ENST00000547018 FKBP5Q13451 457 aaPredicted RBP15.99■□□□□ 0.15
SCAF11-209ENST00000547018 ALDH1L2Q3SY69 923 aa15.99■□□□□ 0.15
SCAF11-209ENST00000547018 MPRIPQ6WCQ1 1025 aa15.99■□□□□ 0.15
SCAF11-209ENST00000547018 C16orf71Q8IYS4 520 aaPredicted RBP15.99■□□□□ 0.15
SCAF11-209ENST00000547018 ZBTB7BO15156 539 aaPredicted RBP15.98■□□□□ 0.15
SCAF11-209ENST00000547018 AATKQ6ZMQ8 1374 aa15.97■□□□□ 0.15
SCAF11-209ENST00000547018 KIF20BQ96Q89 1820 aa15.97■□□□□ 0.15
SCAF11-209ENST00000547018 MEIS3Q99687 375 aa15.97■□□□□ 0.15
SCAF11-209ENST00000547018 FOXD4L1Q9NU39 408 aa15.97■□□□□ 0.15
SCAF11-209ENST00000547018 MED14O60244 1454 aa15.97■□□□□ 0.15
SCAF11-209ENST00000547018 CDC42BPGQ6DT37 1551 aa15.97■□□□□ 0.15
SCAF11-209ENST00000547018 ZNF853P0CG23 659 aa15.97■□□□□ 0.15
SCAF11-209ENST00000547018 NBPF6Q5VWK0 638 aa15.97■□□□□ 0.15
SCAF11-209ENST00000547018 NBPF4Q96M43 638 aa15.97■□□□□ 0.15
SCAF11-209ENST00000547018 STK31Q9BXU1 1019 aa15.97■□□□□ 0.15
SCAF11-209ENST00000547018 API5Q9BZZ5 524 aaKnown RBP15.96■□□□□ 0.15
SCAF11-209ENST00000547018 LGR6Q9HBX8 967 aa15.96■□□□□ 0.15
SCAF11-209ENST00000547018 FLT4P35916 1363 aa15.96■□□□□ 0.14
SCAF11-209ENST00000547018 CHD1LQ86WJ1 897 aa15.95■□□□□ 0.14
SCAF11-209ENST00000547018 TECPR2O15040 1411 aa15.95■□□□□ 0.14
SCAF11-209ENST00000547018 CDK12Q9NYV4 1490 aaPredicted RBP15.95■□□□□ 0.14
SCAF11-209ENST00000547018 TTC21AQ8NDW8 1320 aa15.95■□□□□ 0.14
SCAF11-209ENST00000547018 GNAT3A8MTJ3 354 aa15.95■□□□□ 0.14
SCAF11-209ENST00000547018 CHL1O00533 1208 aa15.95■□□□□ 0.14
SCAF11-209ENST00000547018 CSB-PGBD3P0DP91 1061 aa15.95■□□□□ 0.14
SCAF11-209ENST00000547018 CHRNA2Q15822 529 aa15.95■□□□□ 0.14
SCAF11-209ENST00000547018 TSHZ3Q63HK5 1081 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms