RNA–Protein interactions for RNA: ENST00000545595.6

CACNA2D4-217, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 1 (best)

Gene CACNA2D4, Length 1,615 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-217ENST00000545595 FOXO3O43524 673 aa20.55■□□□□ 0.88
CACNA2D4-217ENST00000545595 PAK3O75914 559 aaPredicted RBP20.55■□□□□ 0.88
CACNA2D4-217ENST00000545595 DLG5Q8TDM6 1919 aa20.55■□□□□ 0.88
CACNA2D4-217ENST00000545595 SOX12O15370 315 aa20.54■□□□□ 0.88
CACNA2D4-217ENST00000545595 HMOX1P09601 288 aa20.54■□□□□ 0.88
CACNA2D4-217ENST00000545595 KIF24Q5T7B8 1368 aa20.54■□□□□ 0.88
CACNA2D4-217ENST00000545595 NUTM2GQ5VZR2 741 aa20.53■□□□□ 0.88
CACNA2D4-217ENST00000545595 PPP4R2Q9NY27 417 aa20.53■□□□□ 0.88
CACNA2D4-217ENST00000545595 TRIM35Q9UPQ4 493 aa20.53■□□□□ 0.88
CACNA2D4-217ENST00000545595 HSP90AB2PQ58FF8 381 aa20.53■□□□□ 0.88
CACNA2D4-217ENST00000545595 PHRF1Q9P1Y6 1649 aaKnown RBP20.52■□□□□ 0.88
CACNA2D4-217ENST00000545595 ALS2Q96Q42 1657 aa20.52■□□□□ 0.88
CACNA2D4-217ENST00000545595 KRT28Q7Z3Y7 464 aa20.52■□□□□ 0.88
CACNA2D4-217ENST00000545595 SLIT3O75094 1523 aa20.51■□□□□ 0.87
CACNA2D4-217ENST00000545595 NPHP3Q7Z494 1330 aa20.51■□□□□ 0.87
CACNA2D4-217ENST00000545595 RTL1A6NKG5 1358 aa20.5■□□□□ 0.87
CACNA2D4-217ENST00000545595 ARHGEF10O15013 1369 aa20.5■□□□□ 0.87
CACNA2D4-217ENST00000545595 RIPK4P57078 832 aa20.49■□□□□ 0.87
CACNA2D4-217ENST00000545595 PHACTR3Q96KR7 559 aa20.49■□□□□ 0.87
CACNA2D4-217ENST00000545595 NEFMP07197 916 aa20.49■□□□□ 0.87
CACNA2D4-217ENST00000545595 NFE2L2Q16236 605 aa20.49■□□□□ 0.87
CACNA2D4-217ENST00000545595 SLAIN2Q9P270 581 aa20.49■□□□□ 0.87
CACNA2D4-217ENST00000545595 LTBP4Q8N2S1 1624 aa20.48■□□□□ 0.87
CACNA2D4-217ENST00000545595 IL16Q14005 1332 aa20.48■□□□□ 0.87
CACNA2D4-217ENST00000545595 AMPHP49418 695 aa20.47■□□□□ 0.87
CACNA2D4-217ENST00000545595 KCNH5Q8NCM2 988 aa20.47■□□□□ 0.87
CACNA2D4-217ENST00000545595 USP19O94966 1318 aa20.47■□□□□ 0.87
CACNA2D4-217ENST00000545595 BRINP3Q76B58 766 aa20.46■□□□□ 0.87
CACNA2D4-217ENST00000545595 MYH16Q9H6N6 1097 aa20.46■□□□□ 0.87
CACNA2D4-217ENST00000545595 PXDNQ92626 1479 aa20.46■□□□□ 0.87
CACNA2D4-217ENST00000545595 HOXC9P31274 260 aa20.45■□□□□ 0.87
CACNA2D4-217ENST00000545595 XPCQ01831 940 aaPredicted RBP20.45■□□□□ 0.87
CACNA2D4-217ENST00000545595 AEBP1Q8IUX7 1158 aa20.45■□□□□ 0.87
CACNA2D4-217ENST00000545595 SULT6B1Q6IMI4 303 aa20.45■□□□□ 0.86
CACNA2D4-217ENST00000545595 PLIN1O60240 522 aa20.44■□□□□ 0.86
CACNA2D4-217ENST00000545595 KDRP35968 1356 aa20.44■□□□□ 0.86
CACNA2D4-217ENST00000545595 IGSF1Q8N6C5 1336 aa20.43■□□□□ 0.86
CACNA2D4-217ENST00000545595 FANCIQ9NVI1 1328 aa20.42■□□□□ 0.86
CACNA2D4-217ENST00000545595 TNS3Q68CZ2 1445 aa20.41■□□□□ 0.86
CACNA2D4-217ENST00000545595 PELP1Q8IZL8 1130 aaKnown RBP20.41■□□□□ 0.86
CACNA2D4-217ENST00000545595 MED1Q15648 1581 aaPredicted RBP20.4■□□□□ 0.86
CACNA2D4-217ENST00000545595 SOS2Q07890 1332 aaPredicted RBP20.4■□□□□ 0.86
CACNA2D4-217ENST00000545595 SPATA31A3Q5VYP0 1347 aa20.4■□□□□ 0.86
CACNA2D4-217ENST00000545595 GCP02774 474 aa20.4■□□□□ 0.86
CACNA2D4-217ENST00000545595 EXOC6Q8TAG9 804 aa20.4■□□□□ 0.86
CACNA2D4-217ENST00000545595 B4GALNT3Q6L9W6 998 aa20.39■□□□□ 0.86
CACNA2D4-217ENST00000545595 TSR2Q969E8 191 aaKnown RBP20.39■□□□□ 0.86
CACNA2D4-217ENST00000545595 EYA1Q99502 592 aa20.39■□□□□ 0.86
CACNA2D4-217ENST00000545595 CRYBG1Q9Y4K1 1723 aa20.39■□□□□ 0.85
CACNA2D4-217ENST00000545595 LMOD3Q0VAK6 560 aa20.38■□□□□ 0.85
CACNA2D4-217ENST00000545595 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.38■□□□□ 0.85
CACNA2D4-217ENST00000545595 NHSL1Q5SYE7 1610 aa20.38■□□□□ 0.85
CACNA2D4-217ENST00000545595 BCAR3O75815 825 aa20.38■□□□□ 0.85
CACNA2D4-217ENST00000545595 IP6K1Q92551 441 aa20.38■□□□□ 0.85
CACNA2D4-217ENST00000545595 DDX17Q92841 729 aaKnown RBP20.38■□□□□ 0.85
CACNA2D4-217ENST00000545595 C20orf194Q5TEA3 1177 aa20.37■□□□□ 0.85
CACNA2D4-217ENST00000545595 ARHGEF25Q86VW2 580 aa20.37■□□□□ 0.85
CACNA2D4-217ENST00000545595 RGPD2P0DJD1 1756 aa20.37■□□□□ 0.85
CACNA2D4-217ENST00000545595 CT47B1P0C2W7 299 aaPredicted RBP20.36■□□□□ 0.85
CACNA2D4-217ENST00000545595 RARSP54136 660 aaKnown RBP20.36■□□□□ 0.85
CACNA2D4-217ENST00000545595 CAMTA1Q9Y6Y1 1673 aa20.35■□□□□ 0.85
CACNA2D4-217ENST00000545595 CALD1Q05682 793 aaKnown RBP20.35■□□□□ 0.85
CACNA2D4-217ENST00000545595 CRBNQ96SW2 442 aa20.35■□□□□ 0.85
CACNA2D4-217ENST00000545595 LMOD2Q6P5Q4 547 aa20.35■□□□□ 0.85
CACNA2D4-217ENST00000545595 THUMPD2Q9BTF0 503 aaKnown RBP20.35■□□□□ 0.85
CACNA2D4-217ENST00000545595 EXOSC9Q06265 439 aaKnown RBP20.34■□□□□ 0.85
CACNA2D4-217ENST00000545595 RGPD5Q99666 1765 aa20.33■□□□□ 0.85
CACNA2D4-217ENST00000545595 LRRC37A3O60309 1634 aa20.32■□□□□ 0.84
CACNA2D4-217ENST00000545595 ZNF853P0CG23 659 aa20.32■□□□□ 0.84
CACNA2D4-217ENST00000545595 IFT57Q9NWB7 429 aa20.32■□□□□ 0.84
CACNA2D4-217ENST00000545595 FAM83GA6ND36 823 aa20.31■□□□□ 0.84
CACNA2D4-217ENST00000545595 LTV1Q96GA3 475 aaPredicted RBP20.31■□□□□ 0.84
CACNA2D4-217ENST00000545595 CCDC136Q96JN2 1154 aa20.31■□□□□ 0.84
CACNA2D4-217ENST00000545595 NCAPD2Q15021 1401 aa20.31■□□□□ 0.84
CACNA2D4-217ENST00000545595 ABCC6O95255 1503 aa20.31■□□□□ 0.84
CACNA2D4-217ENST00000545595 COL18A1P39060 1754 aa20.3■□□□□ 0.84
CACNA2D4-217ENST00000545595 GNAI1P63096 354 aa20.3■□□□□ 0.84
CACNA2D4-217ENST00000545595 CPDO75976 1380 aa20.28■□□□□ 0.84
CACNA2D4-217ENST00000545595 LMO7Q8WWI1 1683 aa20.28■□□□□ 0.84
CACNA2D4-217ENST00000545595 ZBTB7CA1YPR0 619 aa20.28■□□□□ 0.84
CACNA2D4-217ENST00000545595 DCTN1Q14203 1278 aa20.28■□□□□ 0.84
CACNA2D4-217ENST00000545595 MTHFSDQ2M296 383 aaKnown RBP20.28■□□□□ 0.84
CACNA2D4-217ENST00000545595 AHDC1Q5TGY3 1603 aaPredicted RBP20.28■□□□□ 0.84
CACNA2D4-217ENST00000545595 ROBO1Q9Y6N7 1651 aa20.28■□□□□ 0.84
CACNA2D4-217ENST00000545595 CFAP44Q96MT7 982 aa20.27■□□□□ 0.84
CACNA2D4-217ENST00000545595 LAS1LQ9Y4W2 734 aaKnown RBP20.27■□□□□ 0.84
CACNA2D4-217ENST00000545595 PDE3AQ14432 1141 aa20.27■□□□□ 0.83
CACNA2D4-217ENST00000545595 GAS2L2Q8NHY3 880 aa20.27■□□□□ 0.83
CACNA2D4-217ENST00000545595 MBIPQ9NS73 344 aa20.27■□□□□ 0.83
CACNA2D4-217ENST00000545595 CRB1P82279 1406 aa20.26■□□□□ 0.83
CACNA2D4-217ENST00000545595 PLEKHG5O94827 1062 aa20.26■□□□□ 0.83
CACNA2D4-217ENST00000545595 BCL2L13Q9BXK5 485 aa20.26■□□□□ 0.83
CACNA2D4-217ENST00000545595 ABCA3Q99758 1704 aa20.26■□□□□ 0.83
CACNA2D4-217ENST00000545595 NBPF6Q5VWK0 638 aa20.25■□□□□ 0.83
CACNA2D4-217ENST00000545595 USHBP1Q8N6Y0 703 aa20.25■□□□□ 0.83
CACNA2D4-217ENST00000545595 NBPF4Q96M43 638 aa20.25■□□□□ 0.83
CACNA2D4-217ENST00000545595 MCM10Q7L590 875 aa20.24■□□□□ 0.83
CACNA2D4-217ENST00000545595 FAM208AQ9UK61 1670 aaKnown RBP20.24■□□□□ 0.83
CACNA2D4-217ENST00000545595 CANXP27824 592 aaKnown RBP20.24■□□□□ 0.83
CACNA2D4-217ENST00000545595 AEBP2Q6ZN18 517 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms