RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 ALDH1L2Q3SY69 923 aa10.66□□□□□ -0.7
CCDC7-210ENST00000545067 TNPO1Q92973 898 aaKnown RBP10.66□□□□□ -0.7
CCDC7-210ENST00000545067 CHMP3Q9Y3E7 222 aa10.66□□□□□ -0.7
CCDC7-210ENST00000545067 ADCY10Q96PN6 1610 aa10.66□□□□□ -0.7
CCDC7-210ENST00000545067 SURF6O75683 361 aaKnown RBP10.66□□□□□ -0.7
CCDC7-210ENST00000545067 AIMP1Q12904 312 aaKnown RBP10.66□□□□□ -0.7
CCDC7-210ENST00000545067 MEIS3Q99687 375 aa10.66□□□□□ -0.7
CCDC7-210ENST00000545067 IFT57Q9NWB7 429 aa10.66□□□□□ -0.7
CCDC7-210ENST00000545067 CSB-PGBD3P0DP91 1061 aa10.65□□□□□ -0.7
CCDC7-210ENST00000545067 CFAP44Q96MT7 982 aa10.65□□□□□ -0.7
CCDC7-210ENST00000545067 CROCC2H7BZ55 1655 aa10.65□□□□□ -0.7
CCDC7-210ENST00000545067 OTUD7AQ8TE49 926 aaPredicted RBP10.65□□□□□ -0.7
CCDC7-210ENST00000545067 INSRP06213 1382 aa10.65□□□□□ -0.7
CCDC7-210ENST00000545067 UPF3BQ9BZI7 483 aaKnown RBP10.65□□□□□ -0.71
CCDC7-210ENST00000545067 RSPH6AQ9H0K4 717 aa10.65□□□□□ -0.71
CCDC7-210ENST00000545067 MRE11P49959 708 aa10.64□□□□□ -0.71
CCDC7-210ENST00000545067 SMC5Q8IY18 1101 aa10.64□□□□□ -0.71
CCDC7-210ENST00000545067 MRPL50Q8N5N7 158 aaKnown RBP10.64□□□□□ -0.71
CCDC7-210ENST00000545067 LARP6Q9BRS8 491 aaKnown RBP10.64□□□□□ -0.71
CCDC7-210ENST00000545067 ABCC11Q96J66 1382 aa10.64□□□□□ -0.71
CCDC7-210ENST00000545067 ZNF692Q9BU19 519 aaPredicted RBP10.64□□□□□ -0.71
CCDC7-210ENST00000545067 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.64□□□□□ -0.71
CCDC7-210ENST00000545067 UBTFL1P0CB47 393 aaPredicted RBP10.64□□□□□ -0.71
CCDC7-210ENST00000545067 GRPEL1Q9HAV7 217 aa10.64□□□□□ -0.71
CCDC7-210ENST00000545067 C9orf78Q9NZ63 289 aaPredicted RBP10.64□□□□□ -0.71
CCDC7-210ENST00000545067 NSD2O96028 1365 aa10.64□□□□□ -0.71
CCDC7-210ENST00000545067 PSME1Q06323 249 aa10.63□□□□□ -0.71
CCDC7-210ENST00000545067 ABCC1P33527 1531 aa10.63□□□□□ -0.71
CCDC7-210ENST00000545067 HDGFL1Q5TGJ6 251 aa10.63□□□□□ -0.71
CCDC7-210ENST00000545067 CHD1O14646 1710 aa10.63□□□□□ -0.71
CCDC7-210ENST00000545067 ACEP12821 1306 aa10.63□□□□□ -0.71
CCDC7-210ENST00000545067 ANXA1P04083 346 aa10.63□□□□□ -0.71
CCDC7-210ENST00000545067 BMP2KLQ5H9B9 411 aa10.63□□□□□ -0.71
CCDC7-210ENST00000545067 DDX54Q8TDD1 881 aaKnown RBP10.63□□□□□ -0.71
CCDC7-210ENST00000545067 ZBTB7BO15156 539 aaPredicted RBP10.62□□□□□ -0.71
CCDC7-210ENST00000545067 GNAI2P04899 355 aa10.62□□□□□ -0.71
CCDC7-210ENST00000545067 SKOR2Q2VWA4 1001 aaPredicted RBP10.62□□□□□ -0.71
CCDC7-210ENST00000545067 NUTM1Q86Y26 1132 aa10.62□□□□□ -0.71
CCDC7-210ENST00000545067 XRCC6P12956 609 aaKnown RBP eCLIP10.62□□□□□ -0.71
CCDC7-210ENST00000545067 NASPP49321 788 aaPredicted RBP10.62□□□□□ -0.71
CCDC7-210ENST00000545067 EIF4A2Q14240 407 aaKnown RBP10.62□□□□□ -0.71
CCDC7-210ENST00000545067 USP19O94966 1318 aa10.62□□□□□ -0.71
CCDC7-210ENST00000545067 GOLGA6L4A6NEF3 574 aa10.62□□□□□ -0.71
CCDC7-210ENST00000545067 RABEP1Q15276 862 aa10.62□□□□□ -0.71
CCDC7-210ENST00000545067 TRPM2O94759 1503 aa10.61□□□□□ -0.71
CCDC7-210ENST00000545067 DTNBO60941 627 aa10.61□□□□□ -0.71
CCDC7-210ENST00000545067 PLEKHF1Q96S99 279 aa10.61□□□□□ -0.71
CCDC7-210ENST00000545067 IL16Q14005 1332 aa10.61□□□□□ -0.71
CCDC7-210ENST00000545067 GLIPR1L2Q4G1C9 344 aa10.61□□□□□ -0.71
CCDC7-210ENST00000545067 YTHDC2Q9H6S0 1430 aaKnown RBP10.61□□□□□ -0.71
CCDC7-210ENST00000545067 NUCB2P80303 420 aa10.61□□□□□ -0.71
CCDC7-210ENST00000545067 GAS2L2Q8NHY3 880 aa10.61□□□□□ -0.71
CCDC7-210ENST00000545067 CLTCL1P53675 1640 aa10.61□□□□□ -0.71
CCDC7-210ENST00000545067 CCDC30Q5VVM6 783 aa10.6□□□□□ -0.71
CCDC7-210ENST00000545067 DIAPH3Q9NSV4 1193 aa10.6□□□□□ -0.71
CCDC7-210ENST00000545067 ESCO1Q5FWF5 840 aa10.6□□□□□ -0.71
CCDC7-210ENST00000545067 RPAP2Q8IXW5 612 aaPredicted RBP10.6□□□□□ -0.71
CCDC7-210ENST00000545067 AMOTL2Q9Y2J4 779 aa10.6□□□□□ -0.71
CCDC7-210ENST00000545067 ERC2O15083 957 aa10.6□□□□□ -0.71
CCDC7-210ENST00000545067 G2E3Q7L622 706 aa10.6□□□□□ -0.71
CCDC7-210ENST00000545067 FAM43AQ8N2R8 423 aa10.6□□□□□ -0.71
CCDC7-210ENST00000545067 LRRCC1Q9C099 1032 aa10.6□□□□□ -0.71
CCDC7-210ENST00000545067 IQGAP3Q86VI3 1631 aa10.6□□□□□ -0.71
CCDC7-210ENST00000545067 KDM5AP29375 1690 aaKnown RBP10.6□□□□□ -0.71
CCDC7-210ENST00000545067 PPIP5K1Q6PFW1 1433 aa10.59□□□□□ -0.71
CCDC7-210ENST00000545067 ZCCHC11Q5TAX3 1644 aaKnown RBP10.59□□□□□ -0.71
CCDC7-210ENST00000545067 SDSP20132 328 aa10.59□□□□□ -0.71
CCDC7-210ENST00000545067 C1orf141Q5JVX7 400 aa10.59□□□□□ -0.71
CCDC7-210ENST00000545067 YEATS2Q9ULM3 1422 aa10.59□□□□□ -0.71
CCDC7-210ENST00000545067 GNAI3P08754 354 aa10.59□□□□□ -0.71
CCDC7-210ENST00000545067 PTMSP20962 102 aa10.59□□□□□ -0.71
CCDC7-210ENST00000545067 LRRFIP2Q9Y608 721 aaKnown RBP10.59□□□□□ -0.71
CCDC7-210ENST00000545067 VPS37CA5D8V6 355 aaPredicted RBP10.58□□□□□ -0.72
CCDC7-210ENST00000545067 SRGAP3O43295 1099 aa10.58□□□□□ -0.72
CCDC7-210ENST00000545067 IL13P35225 146 aa10.58□□□□□ -0.72
CCDC7-210ENST00000545067 SIL1Q9H173 461 aa10.58□□□□□ -0.72
CCDC7-210ENST00000545067 GDPD2Q9HCC8 539 aa10.58□□□□□ -0.72
CCDC7-210ENST00000545067 SYNMO15061 1565 aa10.58□□□□□ -0.72
CCDC7-210ENST00000545067 ZFYVE16Q7Z3T8 1539 aa10.58□□□□□ -0.72
CCDC7-210ENST00000545067 TTC21BQ7Z4L5 1316 aa10.57□□□□□ -0.72
CCDC7-210ENST00000545067 IFIT2P09913 472 aaKnown RBP10.57□□□□□ -0.72
CCDC7-210ENST00000545067 FOSBP53539 338 aa10.57□□□□□ -0.72
CCDC7-210ENST00000545067 CCT4P50991 539 aaKnown RBP10.57□□□□□ -0.72
CCDC7-210ENST00000545067 MTHFSDQ2M296 383 aaKnown RBP10.57□□□□□ -0.72
CCDC7-210ENST00000545067 PLEKHM2Q8IWE5 1019 aa10.57□□□□□ -0.72
CCDC7-210ENST00000545067 UNC13BO14795 1591 aa10.57□□□□□ -0.72
CCDC7-210ENST00000545067 TTC22Q5TAA0 569 aa10.57□□□□□ -0.72
CCDC7-210ENST00000545067 CWC27Q6UX04 472 aaKnown RBP10.57□□□□□ -0.72
CCDC7-210ENST00000545067 CHAMP1Q96JM3 812 aa10.57□□□□□ -0.72
CCDC7-210ENST00000545067 SBNO2Q9Y2G9 1366 aa10.57□□□□□ -0.72
CCDC7-210ENST00000545067 FLIIQ13045 1269 aa10.56□□□□□ -0.72
CCDC7-210ENST00000545067 ZGPATQ8N5A5 531 aaKnown RBP10.56□□□□□ -0.72
CCDC7-210ENST00000545067 RBM27Q9P2N5 1060 aaKnown RBP10.56□□□□□ -0.72
CCDC7-210ENST00000545067 CD2BP2O95400 341 aaKnown RBP10.56□□□□□ -0.72
CCDC7-210ENST00000545067 POLR1AO95602 1720 aaPredicted RBP10.56□□□□□ -0.72
CCDC7-210ENST00000545067 ZNF530Q6P9A1 599 aaPredicted RBP10.56□□□□□ -0.72
CCDC7-210ENST00000545067 DRC7Q8IY82 874 aa10.56□□□□□ -0.72
CCDC7-210ENST00000545067 ESPNB1AK53 854 aa10.55□□□□□ -0.72
CCDC7-210ENST00000545067 HSP90B1P14625 803 aaKnown RBP10.55□□□□□ -0.72
CCDC7-210ENST00000545067 MPRIPQ6WCQ1 1025 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms