RNA–Protein interactions for RNA: ENST00000544551.5

RDX-218, Transcript of radixin, humanhuman

TSL 2 BASIC

Gene RDX, Length 4,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-218ENST00000544551 CHD1O14646 1710 aa18.27■□□□□ 0.52
RDX-218ENST00000544551 SURF6O75683 361 aaKnown RBP18.27■□□□□ 0.51
RDX-218ENST00000544551 CSB-PGBD3P0DP91 1061 aa18.27■□□□□ 0.51
RDX-218ENST00000544551 INSRP06213 1382 aa18.27■□□□□ 0.51
RDX-218ENST00000544551 SSFA2P28290 1259 aa18.26■□□□□ 0.51
RDX-218ENST00000544551 IFT57Q9NWB7 429 aa18.26■□□□□ 0.51
RDX-218ENST00000544551 CROCC2H7BZ55 1655 aa18.26■□□□□ 0.51
RDX-218ENST00000544551 CHMP3Q9Y3E7 222 aa18.26■□□□□ 0.51
RDX-218ENST00000544551 FGD1P98174 961 aa18.26■□□□□ 0.51
RDX-218ENST00000544551 LARP6Q9BRS8 491 aaKnown RBP18.26■□□□□ 0.51
RDX-218ENST00000544551 PRPF40AO75400 957 aaKnown RBP18.25■□□□□ 0.51
RDX-218ENST00000544551 REC8O95072 547 aa18.25■□□□□ 0.51
RDX-218ENST00000544551 ANXA1P04083 346 aa18.25■□□□□ 0.51
RDX-218ENST00000544551 PSME1Q06323 249 aa18.25■□□□□ 0.51
RDX-218ENST00000544551 MRPL50Q8N5N7 158 aaKnown RBP18.25■□□□□ 0.51
RDX-218ENST00000544551 TNPO1Q92973 898 aaKnown RBP18.25■□□□□ 0.51
RDX-218ENST00000544551 K7ELQ4 463 aaPredicted RBP18.25■□□□□ 0.51
RDX-218ENST00000544551 ZNF692Q9BU19 519 aaPredicted RBP18.25■□□□□ 0.51
RDX-218ENST00000544551 ACEP12821 1306 aa18.25■□□□□ 0.51
RDX-218ENST00000544551 ABCC1P33527 1531 aa18.25■□□□□ 0.51
RDX-218ENST00000544551 MSNP26038 577 aaKnown RBP18.25■□□□□ 0.51
RDX-218ENST00000544551 UPF3BQ9BZI7 483 aaKnown RBP18.25■□□□□ 0.51
RDX-218ENST00000544551 SMC5Q8IY18 1101 aa18.25■□□□□ 0.51
RDX-218ENST00000544551 DDX54Q8TDD1 881 aaKnown RBP18.23■□□□□ 0.51
RDX-218ENST00000544551 DTNBO60941 627 aa18.23■□□□□ 0.51
RDX-218ENST00000544551 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.23■□□□□ 0.51
RDX-218ENST00000544551 ZBTB7BO15156 539 aaPredicted RBP18.23■□□□□ 0.51
RDX-218ENST00000544551 EIF4A2Q14240 407 aaKnown RBP18.23■□□□□ 0.51
RDX-218ENST00000544551 C9orf78Q9NZ63 289 aaPredicted RBP18.23■□□□□ 0.51
RDX-218ENST00000544551 UBTFL1P0CB47 393 aaPredicted RBP18.22■□□□□ 0.51
RDX-218ENST00000544551 HDGFL1Q5TGJ6 251 aa18.22■□□□□ 0.51
RDX-218ENST00000544551 ABCC11Q96J66 1382 aa18.22■□□□□ 0.51
RDX-218ENST00000544551 PLEKHF1Q96S99 279 aa18.22■□□□□ 0.51
RDX-218ENST00000544551 NUTM1Q86Y26 1132 aa18.22■□□□□ 0.51
RDX-218ENST00000544551 NSD2O96028 1365 aa18.21■□□□□ 0.51
RDX-218ENST00000544551 YEATS2Q9ULM3 1422 aa18.21■□□□□ 0.51
RDX-218ENST00000544551 AMOTL2Q9Y2J4 779 aa18.21■□□□□ 0.51
RDX-218ENST00000544551 USP19O94966 1318 aa18.21■□□□□ 0.51
RDX-218ENST00000544551 YTHDC2Q9H6S0 1430 aaKnown RBP18.21■□□□□ 0.5
RDX-218ENST00000544551 GNAI2P04899 355 aa18.21■□□□□ 0.5
RDX-218ENST00000544551 ESCO1Q5FWF5 840 aa18.21■□□□□ 0.5
RDX-218ENST00000544551 CLTCL1P53675 1640 aa18.2■□□□□ 0.5
RDX-218ENST00000544551 BMP2KLQ5H9B9 411 aa18.2■□□□□ 0.5
RDX-218ENST00000544551 TRPM2O94759 1503 aa18.2■□□□□ 0.5
RDX-218ENST00000544551 ZCCHC11Q5TAX3 1644 aaKnown RBP18.19■□□□□ 0.5
RDX-218ENST00000544551 G2E3Q7L622 706 aa18.19■□□□□ 0.5
RDX-218ENST00000544551 GRPEL1Q9HAV7 217 aa18.19■□□□□ 0.5
RDX-218ENST00000544551 XRCC6P12956 609 aaKnown RBP eCLIP18.18■□□□□ 0.5
RDX-218ENST00000544551 MRE11P49959 708 aa18.18■□□□□ 0.5
RDX-218ENST00000544551 IL16Q14005 1332 aa18.18■□□□□ 0.5
RDX-218ENST00000544551 PPIP5K1Q6PFW1 1433 aa18.18■□□□□ 0.5
RDX-218ENST00000544551 IQGAP3Q86VI3 1631 aa18.17■□□□□ 0.5
RDX-218ENST00000544551 IL13P35225 146 aa18.17■□□□□ 0.5
RDX-218ENST00000544551 CCDC30Q5VVM6 783 aa18.17■□□□□ 0.5
RDX-218ENST00000544551 GAS2L2Q8NHY3 880 aa18.17■□□□□ 0.5
RDX-218ENST00000544551 SDSP20132 328 aa18.16■□□□□ 0.5
RDX-218ENST00000544551 RABEP1Q15276 862 aa18.16■□□□□ 0.5
RDX-218ENST00000544551 ZFYVE16Q7Z3T8 1539 aa18.16■□□□□ 0.5
RDX-218ENST00000544551 NASPP49321 788 aaPredicted RBP18.15■□□□□ 0.5
RDX-218ENST00000544551 C1orf141Q5JVX7 400 aa18.15■□□□□ 0.5
RDX-218ENST00000544551 RPAP2Q8IXW5 612 aaPredicted RBP18.15■□□□□ 0.5
RDX-218ENST00000544551 SKOR2Q2VWA4 1001 aaPredicted RBP18.15■□□□□ 0.5
RDX-218ENST00000544551 LRRCC1Q9C099 1032 aa18.15■□□□□ 0.5
RDX-218ENST00000544551 SIL1Q9H173 461 aa18.15■□□□□ 0.5
RDX-218ENST00000544551 LRRFIP2Q9Y608 721 aaKnown RBP18.15■□□□□ 0.5
RDX-218ENST00000544551 TTC21BQ7Z4L5 1316 aa18.15■□□□□ 0.5
RDX-218ENST00000544551 MTHFSDQ2M296 383 aaKnown RBP18.15■□□□□ 0.5
RDX-218ENST00000544551 DIAPH3Q9NSV4 1193 aa18.15■□□□□ 0.5
RDX-218ENST00000544551 KDM5AP29375 1690 aaKnown RBP18.14■□□□□ 0.5
RDX-218ENST00000544551 GOLGA6L4A6NEF3 574 aa18.14■□□□□ 0.5
RDX-218ENST00000544551 ERC2O15083 957 aa18.14■□□□□ 0.5
RDX-218ENST00000544551 SRGAP3O43295 1099 aa18.14■□□□□ 0.5
RDX-218ENST00000544551 GDPD2Q9HCC8 539 aa18.14■□□□□ 0.49
RDX-218ENST00000544551 GNAI3P08754 354 aa18.13■□□□□ 0.49
RDX-218ENST00000544551 NUCB2P80303 420 aa18.13■□□□□ 0.49
RDX-218ENST00000544551 CHAMP1Q96JM3 812 aa18.13■□□□□ 0.49
RDX-218ENST00000544551 SYNMO15061 1565 aa18.12■□□□□ 0.49
RDX-218ENST00000544551 MPRIPQ6WCQ1 1025 aa18.12■□□□□ 0.49
RDX-218ENST00000544551 PLEKHM2Q8IWE5 1019 aa18.12■□□□□ 0.49
RDX-218ENST00000544551 UNC13BO14795 1591 aa18.12■□□□□ 0.49
RDX-218ENST00000544551 SBNO2Q9Y2G9 1366 aa18.12■□□□□ 0.49
RDX-218ENST00000544551 CD2BP2O95400 341 aaKnown RBP18.12■□□□□ 0.49
RDX-218ENST00000544551 FLIIQ13045 1269 aa18.12■□□□□ 0.49
RDX-218ENST00000544551 RIMS2Q9UQ26 1411 aa18.11■□□□□ 0.49
RDX-218ENST00000544551 E9PCH4 1651 aa18.11■□□□□ 0.49
RDX-218ENST00000544551 FOSBP53539 338 aa18.11■□□□□ 0.49
RDX-218ENST00000544551 NLRP2Q9NX02 1062 aa18.11■□□□□ 0.49
RDX-218ENST00000544551 VPS37CA5D8V6 355 aaPredicted RBP18.11■□□□□ 0.49
RDX-218ENST00000544551 IFIT2P09913 472 aaKnown RBP18.11■□□□□ 0.49
RDX-218ENST00000544551 ZNF530Q6P9A1 599 aaPredicted RBP18.11■□□□□ 0.49
RDX-218ENST00000544551 POGZQ7Z3K3 1410 aa18.11■□□□□ 0.49
RDX-218ENST00000544551 CCT4P50991 539 aaKnown RBP18.11■□□□□ 0.49
RDX-218ENST00000544551 ZC3H6P61129 1189 aaKnown RBP18.11■□□□□ 0.49
RDX-218ENST00000544551 CWC27Q6UX04 472 aaKnown RBP18.11■□□□□ 0.49
RDX-218ENST00000544551 ZGPATQ8N5A5 531 aaKnown RBP18.11■□□□□ 0.49
RDX-218ENST00000544551 TTC22Q5TAA0 569 aa18.1■□□□□ 0.49
RDX-218ENST00000544551 PUS7Q96PZ0 661 aaKnown RBP18.1■□□□□ 0.49
RDX-218ENST00000544551 GNAT3A8MTJ3 354 aa18.1■□□□□ 0.49
RDX-218ENST00000544551 TAF7Q15545 349 aaPredicted RBP18.1■□□□□ 0.49
RDX-218ENST00000544551 RBM27Q9P2N5 1060 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms