RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 CALD1Q05682 793 aaKnown RBP15.57■□□□□ 0.08
LRTOMT-221ENST00000544409 ALDH1L2Q3SY69 923 aa15.57■□□□□ 0.08
LRTOMT-221ENST00000544409 C3P01024 1663 aa15.57■□□□□ 0.08
LRTOMT-221ENST00000544409 HMOX1P09601 288 aa15.57■□□□□ 0.08
LRTOMT-221ENST00000544409 IL13P35225 146 aa15.57■□□□□ 0.08
LRTOMT-221ENST00000544409 ITPRIPQ8IWB1 547 aa15.57■□□□□ 0.08
LRTOMT-221ENST00000544409 ZNF692Q9BU19 519 aaPredicted RBP15.56■□□□□ 0.08
LRTOMT-221ENST00000544409 ZRANB1Q9UGI0 708 aa15.56■□□□□ 0.08
LRTOMT-221ENST00000544409 ZNF428Q96B54 188 aa15.55■□□□□ 0.08
LRTOMT-221ENST00000544409 NCKAP5LQ9HCH0 1330 aa15.55■□□□□ 0.08
LRTOMT-221ENST00000544409 PHACTR3Q96KR7 559 aa15.55■□□□□ 0.08
LRTOMT-221ENST00000544409 ADAMTS13Q76LX8 1427 aa15.54■□□□□ 0.08
LRTOMT-221ENST00000544409 ROBO2Q9HCK4 1378 aa15.54■□□□□ 0.08
LRTOMT-221ENST00000544409 FRAT2O75474 233 aaPredicted RBP15.53■□□□□ 0.08
LRTOMT-221ENST00000544409 HDAC1Q13547 482 aaPredicted RBP15.53■□□□□ 0.08
LRTOMT-221ENST00000544409 TMEM57Q8N5G2 664 aa15.53■□□□□ 0.08
LRTOMT-221ENST00000544409 PRR36Q9H6K5 1346 aa15.53■□□□□ 0.08
LRTOMT-221ENST00000544409 USP19O94966 1318 aa15.52■□□□□ 0.08
LRTOMT-221ENST00000544409 PLEKHG5O94827 1062 aa15.52■□□□□ 0.08
LRTOMT-221ENST00000544409 GNAI1P63096 354 aa15.52■□□□□ 0.08
LRTOMT-221ENST00000544409 PLEKHG1Q9ULL1 1385 aa15.52■□□□□ 0.08
LRTOMT-221ENST00000544409 BRPF1P55201 1214 aaPredicted RBP15.52■□□□□ 0.07
LRTOMT-221ENST00000544409 LMOD3Q0VAK6 560 aa15.52■□□□□ 0.07
LRTOMT-221ENST00000544409 RRS1Q15050 365 aaKnown RBP15.52■□□□□ 0.07
LRTOMT-221ENST00000544409 IFT57Q9NWB7 429 aa15.52■□□□□ 0.07
LRTOMT-221ENST00000544409 DLG5Q8TDM6 1919 aa15.51■□□□□ 0.07
LRTOMT-221ENST00000544409 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.51■□□□□ 0.07
LRTOMT-221ENST00000544409 SEC24BO95487 1268 aa15.5■□□□□ 0.07
LRTOMT-221ENST00000544409 TOPAZ1Q8N9V7 1692 aa15.5■□□□□ 0.07
LRTOMT-221ENST00000544409 UPF2Q9HAU5 1272 aaKnown RBP15.5■□□□□ 0.07
LRTOMT-221ENST00000544409 THUMPD2Q9BTF0 503 aaKnown RBP15.5■□□□□ 0.07
LRTOMT-221ENST00000544409 NRKQ7Z2Y5 1582 aa15.49■□□□□ 0.07
LRTOMT-221ENST00000544409 RRAGDQ9NQL2 400 aaPredicted RBP15.49■□□□□ 0.07
LRTOMT-221ENST00000544409 ZBTB40Q9NUA8 1239 aa15.49■□□□□ 0.07
LRTOMT-221ENST00000544409 VAMP4O75379 141 aa15.48■□□□□ 0.07
LRTOMT-221ENST00000544409 ZNF853P0CG23 659 aa15.48■□□□□ 0.07
LRTOMT-221ENST00000544409 LTKP29376 864 aa15.48■□□□□ 0.07
LRTOMT-221ENST00000544409 TTC21BQ7Z4L5 1316 aa15.48■□□□□ 0.07
LRTOMT-221ENST00000544409 PODXL2Q9NZ53 605 aa15.47■□□□□ 0.07
LRTOMT-221ENST00000544409 SMC5Q8IY18 1101 aa15.47■□□□□ 0.07
LRTOMT-221ENST00000544409 MRPL50Q8N5N7 158 aaKnown RBP15.47■□□□□ 0.07
LRTOMT-221ENST00000544409 MBIPQ9NS73 344 aa15.47■□□□□ 0.07
LRTOMT-221ENST00000544409 ACEP12821 1306 aa15.47■□□□□ 0.07
LRTOMT-221ENST00000544409 PLEKHG3A1L390 1219 aa15.46■□□□□ 0.07
LRTOMT-221ENST00000544409 BECN1Q14457 450 aa15.46■□□□□ 0.07
LRTOMT-221ENST00000544409 ARHGAP45Q92619 1136 aa15.46■□□□□ 0.07
LRTOMT-221ENST00000544409 CHMP4BQ9H444 224 aaKnown RBP15.46■□□□□ 0.07
LRTOMT-221ENST00000544409 EID1Q9Y6B2 187 aa15.46■□□□□ 0.07
LRTOMT-221ENST00000544409 HSP90AA2PQ14568 343 aaPredicted RBP15.46■□□□□ 0.06
LRTOMT-221ENST00000544409 CFAP44Q96MT7 982 aa15.46■□□□□ 0.06
LRTOMT-221ENST00000544409 PTCH1Q13635 1447 aa15.45■□□□□ 0.06
LRTOMT-221ENST00000544409 NAP1L5Q96NT1 182 aaPredicted RBP15.45■□□□□ 0.06
LRTOMT-221ENST00000544409 OVOS2A0A0J9YW53 1432 aa15.45■□□□□ 0.06
LRTOMT-221ENST00000544409 OVOS2Q6IE36 1432 aa15.45■□□□□ 0.06
LRTOMT-221ENST00000544409 TSPYL6Q8N831 410 aa15.45■□□□□ 0.06
LRTOMT-221ENST00000544409 USP6P35125 1406 aa15.45■□□□□ 0.06
LRTOMT-221ENST00000544409 TWISTNBQ3B726 338 aaPredicted RBP15.44■□□□□ 0.06
LRTOMT-221ENST00000544409 NALCNQ8IZF0 1738 aa15.44■□□□□ 0.06
LRTOMT-221ENST00000544409 PIK3R4Q99570 1358 aa15.44■□□□□ 0.06
LRTOMT-221ENST00000544409 EIF4A2Q14240 407 aaKnown RBP15.44■□□□□ 0.06
LRTOMT-221ENST00000544409 TBC1D32Q96NH3 1257 aa15.44■□□□□ 0.06
LRTOMT-221ENST00000544409 PTPRUQ92729 1446 aa15.44■□□□□ 0.06
LRTOMT-221ENST00000544409 NUTM2FA1L443 756 aa15.43■□□□□ 0.06
LRTOMT-221ENST00000544409 CEBPAP49715 358 aaPredicted RBP15.43■□□□□ 0.06
LRTOMT-221ENST00000544409 SLC26A8Q96RN1 970 aa15.43■□□□□ 0.06
LRTOMT-221ENST00000544409 ELL2O00472 640 aaPredicted RBP15.42■□□□□ 0.06
LRTOMT-221ENST00000544409 SLIT1O75093 1534 aa15.42■□□□□ 0.06
LRTOMT-221ENST00000544409 FAM83GA6ND36 823 aa15.42■□□□□ 0.06
LRTOMT-221ENST00000544409 SULT6B1Q6IMI4 303 aa15.42■□□□□ 0.06
LRTOMT-221ENST00000544409 ARXQ96QS3 562 aa15.41■□□□□ 0.06
LRTOMT-221ENST00000544409 ARHGAP23Q9P227 1491 aa15.41■□□□□ 0.06
LRTOMT-221ENST00000544409 ZBTB7BO15156 539 aaPredicted RBP15.41■□□□□ 0.06
LRTOMT-221ENST00000544409 TRHP20396 242 aaPredicted RBP15.41■□□□□ 0.06
LRTOMT-221ENST00000544409 NUCB1Q02818 461 aa15.41■□□□□ 0.06
LRTOMT-221ENST00000544409 USP31Q70CQ4 1352 aa15.4■□□□□ 0.06
LRTOMT-221ENST00000544409 AEBP1Q8IUX7 1158 aa15.4■□□□□ 0.06
LRTOMT-221ENST00000544409 C8orf58Q8NAV2 365 aa15.4■□□□□ 0.06
LRTOMT-221ENST00000544409 AMOTL2Q9Y2J4 779 aa15.4■□□□□ 0.06
LRTOMT-221ENST00000544409 ABCC4O15439 1325 aa15.4■□□□□ 0.06
LRTOMT-221ENST00000544409 PEAK1Q9H792 1746 aa15.4■□□□□ 0.06
LRTOMT-221ENST00000544409 API5Q9BZZ5 524 aaKnown RBP15.4■□□□□ 0.06
LRTOMT-221ENST00000544409 TBX22Q9Y458 520 aa15.4■□□□□ 0.06
LRTOMT-221ENST00000544409 DCTN1Q14203 1278 aa15.4■□□□□ 0.06
LRTOMT-221ENST00000544409 TTC21AQ8NDW8 1320 aa15.4■□□□□ 0.06
LRTOMT-221ENST00000544409 FER1L4A9Z1Z3 1794 aa15.39■□□□□ 0.05
LRTOMT-221ENST00000544409 SSH2Q76I76 1423 aa15.39■□□□□ 0.05
LRTOMT-221ENST00000544409 RGPD1P0DJD0 1748 aa15.39■□□□□ 0.05
LRTOMT-221ENST00000544409 DIP2AQ14689 1571 aa15.39■□□□□ 0.05
LRTOMT-221ENST00000544409 HSP90AA1P07900 732 aaKnown RBP15.38■□□□□ 0.05
LRTOMT-221ENST00000544409 HAP1P54257 671 aaPredicted RBP15.38■□□□□ 0.05
LRTOMT-221ENST00000544409 CHD1LQ86WJ1 897 aa15.38■□□□□ 0.05
LRTOMT-221ENST00000544409 GCC1Q96CN9 775 aa15.38■□□□□ 0.05
LRTOMT-221ENST00000544409 HSP90AB2PQ58FF8 381 aa15.37■□□□□ 0.05
LRTOMT-221ENST00000544409 FMN2Q9NZ56 1722 aa15.37■□□□□ 0.05
LRTOMT-221ENST00000544409 LNPKQ9C0E8 428 aa15.37■□□□□ 0.05
LRTOMT-221ENST00000544409 PLPPR3Q6T4P5 718 aa15.36■□□□□ 0.05
LRTOMT-221ENST00000544409 THEMISQ8N1K5 641 aaPredicted RBP15.36■□□□□ 0.05
LRTOMT-221ENST00000544409 MFAP1P55081 439 aaKnown RBP15.36■□□□□ 0.05
LRTOMT-221ENST00000544409 KIF24Q5T7B8 1368 aa15.36■□□□□ 0.05
LRTOMT-221ENST00000544409 C22orf23Q9BZE7 217 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms