RNA–Protein interactions for RNA: ENST00000543770.5

ATP1A3-207, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 2 BASIC

Gene ATP1A3, Length 3,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-207ENST00000543770 TRIM44Q96DX7 344 aaPredicted RBP13.46□□□□□ -0.25
ATP1A3-207ENST00000543770 GBP4Q96PP9 640 aa13.46□□□□□ -0.25
ATP1A3-207ENST00000543770 TERF2IPQ9NYB0 399 aa13.46□□□□□ -0.25
ATP1A3-207ENST00000543770 FRMPD1Q5SYB0 1578 aa13.46□□□□□ -0.25
ATP1A3-207ENST00000543770 K7ELQ4 463 aaPredicted RBP13.46□□□□□ -0.25
ATP1A3-207ENST00000543770 VAMP4O75379 141 aa13.46□□□□□ -0.25
ATP1A3-207ENST00000543770 TPRNQ4KMQ1 711 aa13.46□□□□□ -0.25
ATP1A3-207ENST00000543770 CHAMP1Q96JM3 812 aa13.46□□□□□ -0.25
ATP1A3-207ENST00000543770 EMILIN1Q9Y6C2 1016 aa13.46□□□□□ -0.25
ATP1A3-207ENST00000543770 LMTK2Q8IWU2 1503 aa13.46□□□□□ -0.25
ATP1A3-207ENST00000543770 ZRANB1Q9UGI0 708 aa13.46□□□□□ -0.26
ATP1A3-207ENST00000543770 IL16Q14005 1332 aa13.45□□□□□ -0.26
ATP1A3-207ENST00000543770 RPGRIP1LQ68CZ1 1315 aa13.45□□□□□ -0.26
ATP1A3-207ENST00000543770 GSPT1P15170 499 aaKnown RBP13.45□□□□□ -0.26
ATP1A3-207ENST00000543770 PKP1Q13835 747 aa13.45□□□□□ -0.26
ATP1A3-207ENST00000543770 MRPL50Q8N5N7 158 aaKnown RBP13.45□□□□□ -0.26
ATP1A3-207ENST00000543770 SIGLEC1Q9BZZ2 1709 aa13.45□□□□□ -0.26
ATP1A3-207ENST00000543770 LRRC7Q96NW7 1537 aa13.45□□□□□ -0.26
ATP1A3-207ENST00000543770 OTUD7AQ8TE49 926 aaPredicted RBP13.45□□□□□ -0.26
ATP1A3-207ENST00000543770 CDK19Q9BWU1 502 aa13.45□□□□□ -0.26
ATP1A3-207ENST00000543770 CD163L1Q9NR16 1453 aa13.45□□□□□ -0.26
ATP1A3-207ENST00000543770 MBIPQ9NS73 344 aa13.45□□□□□ -0.26
ATP1A3-207ENST00000543770 ALDH1L2Q3SY69 923 aa13.44□□□□□ -0.26
ATP1A3-207ENST00000543770 C8orf58Q8NAV2 365 aa13.44□□□□□ -0.26
ATP1A3-207ENST00000543770 POLKQ9UBT6 870 aa13.44□□□□□ -0.26
ATP1A3-207ENST00000543770 NEXMIFQ5QGS0 1516 aa13.44□□□□□ -0.26
ATP1A3-207ENST00000543770 NCLP19338 710 aaKnown RBP13.44□□□□□ -0.26
ATP1A3-207ENST00000543770 AK9Q5TCS8 1911 aa13.44□□□□□ -0.26
ATP1A3-207ENST00000543770 ABCC3O15438 1527 aa13.44□□□□□ -0.26
ATP1A3-207ENST00000543770 KRT24Q2M2I5 525 aa13.44□□□□□ -0.26
ATP1A3-207ENST00000543770 WAPLQ7Z5K2 1190 aa13.43□□□□□ -0.26
ATP1A3-207ENST00000543770 CFAP74Q9C0B2 1584 aa13.43□□□□□ -0.26
ATP1A3-207ENST00000543770 SAMD1Q6SPF0 538 aaPredicted RBP13.43□□□□□ -0.26
ATP1A3-207ENST00000543770 HDGFL2Q7Z4V5 671 aaPredicted RBP13.43□□□□□ -0.26
ATP1A3-207ENST00000543770 DDX49Q9Y6V7 483 aaKnown RBP13.42□□□□□ -0.26
ATP1A3-207ENST00000543770 FCHSD2O94868 740 aa13.42□□□□□ -0.26
ATP1A3-207ENST00000543770 TWISTNBQ3B726 338 aaPredicted RBP13.42□□□□□ -0.26
ATP1A3-207ENST00000543770 MCTP1Q6DN14 999 aa13.42□□□□□ -0.26
ATP1A3-207ENST00000543770 SMARCA5O60264 1052 aaPredicted RBP13.41□□□□□ -0.26
ATP1A3-207ENST00000543770 FOXD4L5Q5VV16 416 aaPredicted RBP13.41□□□□□ -0.26
ATP1A3-207ENST00000543770 FBXO31Q5XUX0 539 aaPredicted RBP13.41□□□□□ -0.26
ATP1A3-207ENST00000543770 FOXD4L4Q8WXT5 416 aaPredicted RBP13.41□□□□□ -0.26
ATP1A3-207ENST00000543770 GCC1Q96CN9 775 aa13.41□□□□□ -0.26
ATP1A3-207ENST00000543770 NFE2L2Q16236 605 aa13.41□□□□□ -0.26
ATP1A3-207ENST00000543770 CIZ1Q9ULV3 898 aaPredicted RBP13.41□□□□□ -0.26
ATP1A3-207ENST00000543770 NCKAP5LQ9HCH0 1330 aa13.41□□□□□ -0.26
ATP1A3-207ENST00000543770 BAG4O95429 457 aaKnown RBP13.41□□□□□ -0.26
ATP1A3-207ENST00000543770 RRS1Q15050 365 aaKnown RBP13.41□□□□□ -0.26
ATP1A3-207ENST00000543770 PUS7Q96PZ0 661 aaKnown RBP13.41□□□□□ -0.26
ATP1A3-207ENST00000543770 POGZQ7Z3K3 1410 aa13.4□□□□□ -0.26
ATP1A3-207ENST00000543770 MED14O60244 1454 aa13.4□□□□□ -0.26
ATP1A3-207ENST00000543770 CDC45O75419 566 aa13.4□□□□□ -0.26
ATP1A3-207ENST00000543770 NASPP49321 788 aaPredicted RBP13.4□□□□□ -0.26
ATP1A3-207ENST00000543770 HECW2Q9P2P5 1572 aa13.4□□□□□ -0.26
ATP1A3-207ENST00000543770 PTPRMP28827 1452 aa13.4□□□□□ -0.26
ATP1A3-207ENST00000543770 HSP90AA2PQ14568 343 aaPredicted RBP13.4□□□□□ -0.26
ATP1A3-207ENST00000543770 NME9Q86XW9 330 aa13.4□□□□□ -0.26
ATP1A3-207ENST00000543770 CAVIN1Q6NZI2 390 aaKnown RBP13.39□□□□□ -0.27
ATP1A3-207ENST00000543770 PLEKHM2Q8IWE5 1019 aa13.39□□□□□ -0.27
ATP1A3-207ENST00000543770 PNPLA6Q8IY17 1366 aa13.39□□□□□ -0.27
ATP1A3-207ENST00000543770 FAM135BQ49AJ0 1406 aa13.39□□□□□ -0.27
ATP1A3-207ENST00000543770 ZGPATQ8N5A5 531 aaKnown RBP13.39□□□□□ -0.27
ATP1A3-207ENST00000543770 YTHDC2Q9H6S0 1430 aaKnown RBP13.38□□□□□ -0.27
ATP1A3-207ENST00000543770 ABCC4O15439 1325 aa13.38□□□□□ -0.27
ATP1A3-207ENST00000543770 RBM27Q9P2N5 1060 aaKnown RBP13.38□□□□□ -0.27
ATP1A3-207ENST00000543770 SKOR2Q2VWA4 1001 aaPredicted RBP13.37□□□□□ -0.27
ATP1A3-207ENST00000543770 CYB5RLQ6IPT4 315 aa13.36□□□□□ -0.27
ATP1A3-207ENST00000543770 PTCH1Q13635 1447 aa13.36□□□□□ -0.27
ATP1A3-207ENST00000543770 GOLGA6L22H0YM25 854 aa13.36□□□□□ -0.27
ATP1A3-207ENST00000543770 GNAI1P63096 354 aa13.36□□□□□ -0.27
ATP1A3-207ENST00000543770 PIK3C2BO00750 1634 aa13.36□□□□□ -0.27
ATP1A3-207ENST00000543770 TSHZ3Q63HK5 1081 aa13.36□□□□□ -0.27
ATP1A3-207ENST00000543770 STAG3Q9UJ98 1225 aa13.36□□□□□ -0.27
ATP1A3-207ENST00000543770 MYO5BQ9ULV0 1848 aa13.35□□□□□ -0.27
ATP1A3-207ENST00000543770 AEBP1Q8IUX7 1158 aa13.35□□□□□ -0.27
ATP1A3-207ENST00000543770 TTC22Q5TAA0 569 aa13.35□□□□□ -0.27
ATP1A3-207ENST00000543770 IFT57Q9NWB7 429 aa13.35□□□□□ -0.27
ATP1A3-207ENST00000543770 IL13P35225 146 aa13.35□□□□□ -0.27
ATP1A3-207ENST00000543770 KLHL40Q2TBA0 621 aa13.35□□□□□ -0.27
ATP1A3-207ENST00000543770 NOL8Q76FK4 1167 aaKnown RBP13.34□□□□□ -0.27
ATP1A3-207ENST00000543770 ISY1Q9ULR0 285 aaKnown RBP13.34□□□□□ -0.27
ATP1A3-207ENST00000543770 ZBTB7CA1YPR0 619 aa13.34□□□□□ -0.27
ATP1A3-207ENST00000543770 PRPF40AO75400 957 aaKnown RBP13.34□□□□□ -0.27
ATP1A3-207ENST00000543770 SDSP20132 328 aa13.34□□□□□ -0.27
ATP1A3-207ENST00000543770 KIAA1211Q6ZU35 1233 aa13.34□□□□□ -0.27
ATP1A3-207ENST00000543770 ARHGAP45Q92619 1136 aa13.34□□□□□ -0.27
ATP1A3-207ENST00000543770 USP26Q9BXU7 913 aa13.34□□□□□ -0.27
ATP1A3-207ENST00000543770 KNDC1Q76NI1 1749 aa13.34□□□□□ -0.27
ATP1A3-207ENST00000543770 MLH3Q9UHC1 1453 aa13.33□□□□□ -0.27
ATP1A3-207ENST00000543770 PIK3R4Q99570 1358 aa13.33□□□□□ -0.27
ATP1A3-207ENST00000543770 SOX12O15370 315 aa13.33□□□□□ -0.27
ATP1A3-207ENST00000543770 ZNF853P0CG23 659 aa13.33□□□□□ -0.27
ATP1A3-207ENST00000543770 BRPF1P55201 1214 aaPredicted RBP13.33□□□□□ -0.27
ATP1A3-207ENST00000543770 ZSCAN23Q3MJ62 389 aa13.33□□□□□ -0.27
ATP1A3-207ENST00000543770 FOXD4L6Q3SYB3 417 aaPredicted RBP13.33□□□□□ -0.28
ATP1A3-207ENST00000543770 FOXD4L3Q6VB84 417 aaPredicted RBP13.33□□□□□ -0.28
ATP1A3-207ENST00000543770 MCM10Q7L590 875 aa13.33□□□□□ -0.28
ATP1A3-207ENST00000543770 RBSNQ9H1K0 784 aa13.33□□□□□ -0.28
ATP1A3-207ENST00000543770 MIS18AQ9NYP9 233 aa13.33□□□□□ -0.28
ATP1A3-207ENST00000543770 MEIS3Q99687 375 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms