RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 NEFMP07197 916 aa17.49■□□□□ 0.39
SLC3A2-220ENST00000542922 TMEM57Q8N5G2 664 aa17.49■□□□□ 0.39
SLC3A2-220ENST00000542922 PEAK1Q9H792 1746 aa17.49■□□□□ 0.39
SLC3A2-220ENST00000542922 FAM83GA6ND36 823 aa17.49■□□□□ 0.39
SLC3A2-220ENST00000542922 AAMPQ13685 434 aa17.49■□□□□ 0.39
SLC3A2-220ENST00000542922 AEBP1Q8IUX7 1158 aa17.49■□□□□ 0.39
SLC3A2-220ENST00000542922 TSPYL6Q8N831 410 aa17.49■□□□□ 0.39
SLC3A2-220ENST00000542922 ZNF692Q9BU19 519 aaPredicted RBP17.49■□□□□ 0.39
SLC3A2-220ENST00000542922 RGPD8O14715 1765 aaPredicted RBP17.48■□□□□ 0.39
SLC3A2-220ENST00000542922 OVOS2A0A0J9YW53 1432 aa17.48■□□□□ 0.39
SLC3A2-220ENST00000542922 OVOS2Q6IE36 1432 aa17.48■□□□□ 0.39
SLC3A2-220ENST00000542922 ARHGAP23Q9P227 1491 aa17.48■□□□□ 0.39
SLC3A2-220ENST00000542922 USP6P35125 1406 aa17.48■□□□□ 0.39
SLC3A2-220ENST00000542922 SLIT1O75093 1534 aa17.47■□□□□ 0.39
SLC3A2-220ENST00000542922 USP19O94966 1318 aa17.47■□□□□ 0.39
SLC3A2-220ENST00000542922 SOX12O15370 315 aa17.47■□□□□ 0.39
SLC3A2-220ENST00000542922 DCTN1Q14203 1278 aa17.47■□□□□ 0.39
SLC3A2-220ENST00000542922 AMOTL2Q9Y2J4 779 aa17.47■□□□□ 0.39
SLC3A2-220ENST00000542922 ELL2O00472 640 aaPredicted RBP17.46■□□□□ 0.39
SLC3A2-220ENST00000542922 DDRGK1Q96HY6 314 aa17.46■□□□□ 0.39
SLC3A2-220ENST00000542922 RWDD1Q9H446 243 aaPredicted RBP17.46■□□□□ 0.39
SLC3A2-220ENST00000542922 NALCNQ8IZF0 1738 aa17.46■□□□□ 0.39
SLC3A2-220ENST00000542922 EIF4A2Q14240 407 aaKnown RBP17.46■□□□□ 0.39
SLC3A2-220ENST00000542922 MBIPQ9NS73 344 aa17.46■□□□□ 0.39
SLC3A2-220ENST00000542922 EID1Q9Y6B2 187 aa17.46■□□□□ 0.39
SLC3A2-220ENST00000542922 PLEKHG3A1L390 1219 aa17.45■□□□□ 0.38
SLC3A2-220ENST00000542922 KIF16BQ96L93 1317 aa17.44■□□□□ 0.38
SLC3A2-220ENST00000542922 VAMP4O75379 141 aa17.44■□□□□ 0.38
SLC3A2-220ENST00000542922 ZNF853P0CG23 659 aa17.44■□□□□ 0.38
SLC3A2-220ENST00000542922 DDX19BQ9UMR2 479 aa17.44■□□□□ 0.38
SLC3A2-220ENST00000542922 ALDH1L2Q3SY69 923 aa17.43■□□□□ 0.38
SLC3A2-220ENST00000542922 DIP2AQ14689 1571 aa17.43■□□□□ 0.38
SLC3A2-220ENST00000542922 HSP90AB2PQ58FF8 381 aa17.43■□□□□ 0.38
SLC3A2-220ENST00000542922 IFT57Q9NWB7 429 aa17.43■□□□□ 0.38
SLC3A2-220ENST00000542922 SSH2Q76I76 1423 aa17.42■□□□□ 0.38
SLC3A2-220ENST00000542922 SULT6B1Q6IMI4 303 aa17.42■□□□□ 0.38
SLC3A2-220ENST00000542922 C8orf58Q8NAV2 365 aa17.42■□□□□ 0.38
SLC3A2-220ENST00000542922 ZBTB40Q9NUA8 1239 aa17.42■□□□□ 0.38
SLC3A2-220ENST00000542922 GNAI1P63096 354 aa17.41■□□□□ 0.38
SLC3A2-220ENST00000542922 MRPL50Q8N5N7 158 aaKnown RBP17.41■□□□□ 0.38
SLC3A2-220ENST00000542922 RGPD1P0DJD0 1748 aa17.41■□□□□ 0.38
SLC3A2-220ENST00000542922 TBX22Q9Y458 520 aa17.4■□□□□ 0.38
SLC3A2-220ENST00000542922 PTCH1Q13635 1447 aa17.4■□□□□ 0.38
SLC3A2-220ENST00000542922 RIMS1Q86UR5 1692 aaKnown RBP17.4■□□□□ 0.38
SLC3A2-220ENST00000542922 IPO8O15397 1037 aaKnown RBP17.4■□□□□ 0.38
SLC3A2-220ENST00000542922 HDAC1Q13547 482 aaPredicted RBP17.4■□□□□ 0.38
SLC3A2-220ENST00000542922 XRN1Q8IZH2 1706 aaKnown RBP17.4■□□□□ 0.38
SLC3A2-220ENST00000542922 USP31Q70CQ4 1352 aa17.39■□□□□ 0.37
SLC3A2-220ENST00000542922 DEKP35659 375 aaKnown RBP17.39■□□□□ 0.37
SLC3A2-220ENST00000542922 CALD1Q05682 793 aaKnown RBP17.39■□□□□ 0.37
SLC3A2-220ENST00000542922 FMN2Q9NZ56 1722 aa17.38■□□□□ 0.37
SLC3A2-220ENST00000542922 TWISTNBQ3B726 338 aaPredicted RBP17.38■□□□□ 0.37
SLC3A2-220ENST00000542922 CFAP44Q96MT7 982 aa17.38■□□□□ 0.37
SLC3A2-220ENST00000542922 PIK3C2AO00443 1686 aa17.38■□□□□ 0.37
SLC3A2-220ENST00000542922 KRT24Q2M2I5 525 aa17.38■□□□□ 0.37
SLC3A2-220ENST00000542922 MAP3K19Q56UN5 1328 aa17.37■□□□□ 0.37
SLC3A2-220ENST00000542922 BRPF1P55201 1214 aaPredicted RBP17.37■□□□□ 0.37
SLC3A2-220ENST00000542922 C1orf115Q9H7X2 142 aa17.37■□□□□ 0.37
SLC3A2-220ENST00000542922 KCNA6P17658 529 aa17.36■□□□□ 0.37
SLC3A2-220ENST00000542922 LMOD3Q0VAK6 560 aa17.36■□□□□ 0.37
SLC3A2-220ENST00000542922 MCM10Q7L590 875 aa17.36■□□□□ 0.37
SLC3A2-220ENST00000542922 THEMISQ8N1K5 641 aaPredicted RBP17.36■□□□□ 0.37
SLC3A2-220ENST00000542922 RTL5Q5HYW3 569 aaPredicted RBP17.36■□□□□ 0.37
SLC3A2-220ENST00000542922 SMC5Q8IY18 1101 aa17.35■□□□□ 0.37
SLC3A2-220ENST00000542922 NGDNQ8NEJ9 315 aaKnown RBP17.35■□□□□ 0.37
SLC3A2-220ENST00000542922 ZNF428Q96B54 188 aa17.35■□□□□ 0.37
SLC3A2-220ENST00000542922 TRHP20396 242 aaPredicted RBP17.35■□□□□ 0.37
SLC3A2-220ENST00000542922 PIK3R4Q99570 1358 aa17.33■□□□□ 0.37
SLC3A2-220ENST00000542922 ZBTB7BO15156 539 aaPredicted RBP17.33■□□□□ 0.37
SLC3A2-220ENST00000542922 MARF1Q9Y4F3 1742 aaKnown RBP17.33■□□□□ 0.37
SLC3A2-220ENST00000542922 CEP170BQ9Y4F5 1589 aaPredicted RBP17.33■□□□□ 0.36
SLC3A2-220ENST00000542922 ABCC4O15439 1325 aa17.33■□□□□ 0.36
SLC3A2-220ENST00000542922 FOXO3O43524 673 aa17.33■□□□□ 0.36
SLC3A2-220ENST00000542922 NUTM2GQ5VZR2 741 aa17.33■□□□□ 0.36
SLC3A2-220ENST00000542922 DAXXQ9UER7 740 aaPredicted RBP17.33■□□□□ 0.36
SLC3A2-220ENST00000542922 TTC21AQ8NDW8 1320 aa17.32■□□□□ 0.36
SLC3A2-220ENST00000542922 RBM33Q96EV2 1170 aaKnown RBP17.31■□□□□ 0.36
SLC3A2-220ENST00000542922 ARHGAP45Q92619 1136 aa17.3■□□□□ 0.36
SLC3A2-220ENST00000542922 LNPKQ9C0E8 428 aa17.3■□□□□ 0.36
SLC3A2-220ENST00000542922 SBNO1A3KN83 1393 aa17.29■□□□□ 0.36
SLC3A2-220ENST00000542922 ARHGEF10O15013 1369 aa17.29■□□□□ 0.36
SLC3A2-220ENST00000542922 FLT4P35916 1363 aa17.29■□□□□ 0.36
SLC3A2-220ENST00000542922 SIRT2Q8IXJ6 389 aa17.29■□□□□ 0.36
SLC3A2-220ENST00000542922 TBC1D32Q96NH3 1257 aa17.29■□□□□ 0.36
SLC3A2-220ENST00000542922 MIS18AQ9NYP9 233 aa17.29■□□□□ 0.36
SLC3A2-220ENST00000542922 CRB1P82279 1406 aa17.28■□□□□ 0.36
SLC3A2-220ENST00000542922 CHL1O00533 1208 aa17.28■□□□□ 0.36
SLC3A2-220ENST00000542922 NUCB1Q02818 461 aa17.28■□□□□ 0.36
SLC3A2-220ENST00000542922 MTHFSDQ2M296 383 aaKnown RBP17.28■□□□□ 0.36
SLC3A2-220ENST00000542922 EYA1Q99502 592 aa17.28■□□□□ 0.36
SLC3A2-220ENST00000542922 AMPHP49418 695 aa17.27■□□□□ 0.36
SLC3A2-220ENST00000542922 NLRP6P59044 892 aa17.27■□□□□ 0.36
SLC3A2-220ENST00000542922 RGS12O14924 1447 aa17.27■□□□□ 0.35
SLC3A2-220ENST00000542922 NFKBIBQ15653 356 aa17.26■□□□□ 0.35
SLC3A2-220ENST00000542922 ANKARQ7Z5J8 1434 aa17.26■□□□□ 0.35
SLC3A2-220ENST00000542922 CHD1LQ86WJ1 897 aa17.25■□□□□ 0.35
SLC3A2-220ENST00000542922 KDRP35968 1356 aa17.25■□□□□ 0.35
SLC3A2-220ENST00000542922 MFAP1P55081 439 aaKnown RBP17.25■□□□□ 0.35
SLC3A2-220ENST00000542922 API5Q9BZZ5 524 aaKnown RBP17.25■□□□□ 0.35
SLC3A2-220ENST00000542922 IGSF1Q8N6C5 1336 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms