RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 PTPRMP28827 1452 aa6.59□□□□□ -1.35
KDM3B-209ENST00000542866 REREQ9P2R6 1566 aa6.59□□□□□ -1.35
KDM3B-209ENST00000542866 ZSCAN30Q86W11 494 aa6.59□□□□□ -1.35
KDM3B-209ENST00000542866 SNX21Q969T3 373 aa6.59□□□□□ -1.35
KDM3B-209ENST00000542866 R3HCC1Q9Y3T6 440 aaKnown RBP6.59□□□□□ -1.35
KDM3B-209ENST00000542866 CD2BP2O95400 341 aaKnown RBP6.59□□□□□ -1.35
KDM3B-209ENST00000542866 RBM25P49756 843 aaKnown RBP6.59□□□□□ -1.35
KDM3B-209ENST00000542866 WAPLQ7Z5K2 1190 aa6.59□□□□□ -1.35
KDM3B-209ENST00000542866 PTMSP20962 102 aa6.58□□□□□ -1.36
KDM3B-209ENST00000542866 RNF17Q9BXT8 1623 aaKnown RBP6.58□□□□□ -1.36
KDM3B-209ENST00000542866 KDM4FA0A1W2PPD8 638 aa6.58□□□□□ -1.36
KDM3B-209ENST00000542866 K7ELQ4 463 aaPredicted RBP6.58□□□□□ -1.36
KDM3B-209ENST00000542866 MCTP1Q6DN14 999 aa6.58□□□□□ -1.36
KDM3B-209ENST00000542866 CHD1LQ86WJ1 897 aa6.58□□□□□ -1.36
KDM3B-209ENST00000542866 ZBTB7CA1YPR0 619 aa6.58□□□□□ -1.36
KDM3B-209ENST00000542866 DDIT3P35638 169 aa6.58□□□□□ -1.36
KDM3B-209ENST00000542866 GAS2L2Q8NHY3 880 aa6.58□□□□□ -1.36
KDM3B-209ENST00000542866 RBM33Q96EV2 1170 aaKnown RBP6.58□□□□□ -1.36
KDM3B-209ENST00000542866 C1orf115Q9H7X2 142 aa6.58□□□□□ -1.36
KDM3B-209ENST00000542866 CABP2Q9NPB3 220 aa6.58□□□□□ -1.36
KDM3B-209ENST00000542866 CLTCQ00610 1675 aaKnown RBP6.58□□□□□ -1.36
KDM3B-209ENST00000542866 CALD1Q05682 793 aaKnown RBP6.57□□□□□ -1.36
KDM3B-209ENST00000542866 CCDC27Q2M243 656 aa6.57□□□□□ -1.36
KDM3B-209ENST00000542866 CAVIN1Q6NZI2 390 aaKnown RBP6.57□□□□□ -1.36
KDM3B-209ENST00000542866 IPO8O15397 1037 aaKnown RBP6.57□□□□□ -1.36
KDM3B-209ENST00000542866 NUCB1Q02818 461 aa6.57□□□□□ -1.36
KDM3B-209ENST00000542866 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.57□□□□□ -1.36
KDM3B-209ENST00000542866 A2ML1A8K2U0 1454 aa6.57□□□□□ -1.36
KDM3B-209ENST00000542866 CEP152O94986 1710 aa6.57□□□□□ -1.36
KDM3B-209ENST00000542866 CAMSAP1Q5T5Y3 1602 aa6.57□□□□□ -1.36
KDM3B-209ENST00000542866 MADDQ8WXG6 1647 aa6.57□□□□□ -1.36
KDM3B-209ENST00000542866 OFD1O75665 1012 aa6.56□□□□□ -1.36
KDM3B-209ENST00000542866 BAG4O95429 457 aaKnown RBP6.56□□□□□ -1.36
KDM3B-209ENST00000542866 KCNA6P17658 529 aa6.56□□□□□ -1.36
KDM3B-209ENST00000542866 XPCQ01831 940 aaPredicted RBP6.56□□□□□ -1.36
KDM3B-209ENST00000542866 ZBTB40Q9NUA8 1239 aa6.56□□□□□ -1.36
KDM3B-209ENST00000542866 SOX12O15370 315 aa6.56□□□□□ -1.36
KDM3B-209ENST00000542866 BRD2P25440 801 aaKnown RBP6.56□□□□□ -1.36
KDM3B-209ENST00000542866 TMPOP42166 694 aaKnown RBP6.56□□□□□ -1.36
KDM3B-209ENST00000542866 RIPK4P57078 832 aa6.56□□□□□ -1.36
KDM3B-209ENST00000542866 TBC1D9Q6ZT07 1266 aa6.56□□□□□ -1.36
KDM3B-209ENST00000542866 PPP1R9BQ96SB3 815 aa6.56□□□□□ -1.36
KDM3B-209ENST00000542866 CDK19Q9BWU1 502 aa6.56□□□□□ -1.36
KDM3B-209ENST00000542866 KDM5AP29375 1690 aaKnown RBP6.56□□□□□ -1.36
KDM3B-209ENST00000542866 ZC3H13Q5T200 1668 aaKnown RBP6.56□□□□□ -1.36
KDM3B-209ENST00000542866 IQGAP1P46940 1657 aa6.56□□□□□ -1.36
KDM3B-209ENST00000542866 KLHL40Q2TBA0 621 aa6.56□□□□□ -1.36
KDM3B-209ENST00000542866 ESCO1Q5FWF5 840 aa6.56□□□□□ -1.36
KDM3B-209ENST00000542866 KIF2CQ99661 725 aa6.56□□□□□ -1.36
KDM3B-209ENST00000542866 CT47B1P0C2W7 299 aaPredicted RBP6.55□□□□□ -1.36
KDM3B-209ENST00000542866 PSME1Q06323 249 aa6.55□□□□□ -1.36
KDM3B-209ENST00000542866 BMP2KLQ5H9B9 411 aa6.55□□□□□ -1.36
KDM3B-209ENST00000542866 PLEKHG1Q9ULL1 1385 aa6.55□□□□□ -1.36
KDM3B-209ENST00000542866 ELL2O00472 640 aaPredicted RBP6.55□□□□□ -1.36
KDM3B-209ENST00000542866 FOXD4L5Q5VV16 416 aaPredicted RBP6.55□□□□□ -1.36
KDM3B-209ENST00000542866 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.55□□□□□ -1.36
KDM3B-209ENST00000542866 FOXD4L4Q8WXT5 416 aaPredicted RBP6.55□□□□□ -1.36
KDM3B-209ENST00000542866 NCOA3Q9Y6Q9 1424 aa6.55□□□□□ -1.36
KDM3B-209ENST00000542866 VWDEQ8N2E2 1590 aa6.55□□□□□ -1.36
KDM3B-209ENST00000542866 MYOM1P52179 1685 aa6.55□□□□□ -1.36
KDM3B-209ENST00000542866 RIMS1Q86UR5 1692 aaKnown RBP6.55□□□□□ -1.36
KDM3B-209ENST00000542866 DEPDC5O75140 1603 aa6.55□□□□□ -1.36
KDM3B-209ENST00000542866 NPHP4O75161 1426 aaPredicted RBP6.55□□□□□ -1.36
KDM3B-209ENST00000542866 IGSF3O75054 1194 aa6.55□□□□□ -1.36
KDM3B-209ENST00000542866 KIF16BQ96L93 1317 aa6.54□□□□□ -1.36
KDM3B-209ENST00000542866 UQCRHLA0A096LP55 91 aa6.54□□□□□ -1.36
KDM3B-209ENST00000542866 PRPF40AO75400 957 aaKnown RBP6.54□□□□□ -1.36
KDM3B-209ENST00000542866 UQCRHP07919 91 aa6.54□□□□□ -1.36
KDM3B-209ENST00000542866 GGNBP2Q9H3C7 697 aa6.54□□□□□ -1.36
KDM3B-209ENST00000542866 CCDC61Q9Y6R9 512 aa6.54□□□□□ -1.36
KDM3B-209ENST00000542866 MROH1Q8NDA8 1641 aa6.54□□□□□ -1.36
KDM3B-209ENST00000542866 YTHDC2Q9H6S0 1430 aaKnown RBP6.54□□□□□ -1.36
KDM3B-209ENST00000542866 ZSCAN23Q3MJ62 389 aa6.54□□□□□ -1.36
KDM3B-209ENST00000542866 RBSNQ9H1K0 784 aa6.54□□□□□ -1.36
KDM3B-209ENST00000542866 RBM27Q9P2N5 1060 aaKnown RBP6.54□□□□□ -1.36
KDM3B-209ENST00000542866 TRIM35Q9UPQ4 493 aa6.54□□□□□ -1.36
KDM3B-209ENST00000542866 WASLO00401 505 aaPredicted RBP6.54□□□□□ -1.36
KDM3B-209ENST00000542866 CADPS2Q86UW7 1296 aa6.54□□□□□ -1.36
KDM3B-209ENST00000542866 CLTCL1P53675 1640 aa6.53□□□□□ -1.36
KDM3B-209ENST00000542866 ATAD2Q6PL18 1390 aa6.53□□□□□ -1.36
KDM3B-209ENST00000542866 PRIM1P49642 420 aaKnown RBP6.53□□□□□ -1.36
KDM3B-209ENST00000542866 NUDT16Q96DE0 195 aaKnown RBP6.53□□□□□ -1.36
KDM3B-209ENST00000542866 CABP1Q9NZU7 370 aa6.53□□□□□ -1.36
KDM3B-209ENST00000542866 ADGRB3O60242 1522 aa6.53□□□□□ -1.36
KDM3B-209ENST00000542866 IQSEC2Q5JU85 1478 aa6.53□□□□□ -1.36
KDM3B-209ENST00000542866 SPHKAPQ2M3C7 1700 aa6.53□□□□□ -1.36
KDM3B-209ENST00000542866 APBB1O00213 710 aa6.53□□□□□ -1.36
KDM3B-209ENST00000542866 CDC45O75419 566 aa6.53□□□□□ -1.36
KDM3B-209ENST00000542866 PTMAP06454 111 aaKnown RBP6.53□□□□□ -1.36
KDM3B-209ENST00000542866 NUCB2P80303 420 aa6.53□□□□□ -1.36
KDM3B-209ENST00000542866 PKP1Q13835 747 aa6.53□□□□□ -1.36
KDM3B-209ENST00000542866 RNF214Q8ND24 703 aa6.53□□□□□ -1.36
KDM3B-209ENST00000542866 MSH6P52701 1360 aa6.53□□□□□ -1.36
KDM3B-209ENST00000542866 SPATA31D1Q6ZQQ2 1576 aa6.53□□□□□ -1.36
KDM3B-209ENST00000542866 FER1L4A9Z1Z3 1794 aa6.53□□□□□ -1.36
KDM3B-209ENST00000542866 MYOM2P54296 1465 aa6.52□□□□□ -1.36
KDM3B-209ENST00000542866 GCC1Q96CN9 775 aa6.52□□□□□ -1.36
KDM3B-209ENST00000542866 DNTTIP2Q5QJE6 756 aaKnown RBP6.52□□□□□ -1.37
KDM3B-209ENST00000542866 CHAMP1Q96JM3 812 aa6.52□□□□□ -1.37
KDM3B-209ENST00000542866 C19orf44Q9H6X5 657 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms