RNA–Protein interactions for RNA: ENST00000542335.5

PDE1B-204, Transcript of phosphodiesterase 1B, humanhuman

TSL 2

Gene PDE1B, Length 2,782 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-204ENST00000542335 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.33■□□□□ 0.04
PDE1B-204ENST00000542335 U2SURPO15042 1029 aaKnown RBP15.32■□□□□ 0.04
PDE1B-204ENST00000542335 DIAPH1O60610 1272 aaKnown RBP15.32■□□□□ 0.04
PDE1B-204ENST00000542335 RGS3P49796 1198 aa15.32■□□□□ 0.04
PDE1B-204ENST00000542335 TRIM35Q9UPQ4 493 aa15.32■□□□□ 0.04
PDE1B-204ENST00000542335 CPSF1Q10570 1443 aaKnown RBP15.32■□□□□ 0.04
PDE1B-204ENST00000542335 SETD1BQ9UPS6 1966 aaKnown RBP15.31■□□□□ 0.04
PDE1B-204ENST00000542335 RLBP1P12271 317 aa15.31■□□□□ 0.04
PDE1B-204ENST00000542335 EDC4Q6P2E9 1401 aaKnown RBP15.31■□□□□ 0.04
PDE1B-204ENST00000542335 ZKSCAN2Q63HK3 967 aa15.3■□□□□ 0.04
PDE1B-204ENST00000542335 ARXQ96QS3 562 aa15.29■□□□□ 0.04
PDE1B-204ENST00000542335 ACEP12821 1306 aa15.29■□□□□ 0.04
PDE1B-204ENST00000542335 CDK12Q9NYV4 1490 aaPredicted RBP15.29■□□□□ 0.04
PDE1B-204ENST00000542335 FCHSD2O94868 740 aa15.29■□□□□ 0.04
PDE1B-204ENST00000542335 MVPQ14764 893 aaKnown RBP15.29■□□□□ 0.04
PDE1B-204ENST00000542335 SOX12O15370 315 aa15.28■□□□□ 0.04
PDE1B-204ENST00000542335 BCL2L13Q9BXK5 485 aa15.28■□□□□ 0.04
PDE1B-204ENST00000542335 TNNQ9UQP3 1299 aa15.28■□□□□ 0.04
PDE1B-204ENST00000542335 EXOSC9Q06265 439 aaKnown RBP15.27■□□□□ 0.03
PDE1B-204ENST00000542335 TSR2Q969E8 191 aaKnown RBP15.27■□□□□ 0.03
PDE1B-204ENST00000542335 PCDHB15Q9Y5E8 787 aa15.27■□□□□ 0.03
PDE1B-204ENST00000542335 AATKQ6ZMQ8 1374 aa15.27■□□□□ 0.03
PDE1B-204ENST00000542335 RIPK4P57078 832 aa15.26■□□□□ 0.03
PDE1B-204ENST00000542335 COG3Q96JB2 828 aa15.26■□□□□ 0.03
PDE1B-204ENST00000542335 DZIP1LQ8IYY4 767 aaKnown RBP15.26■□□□□ 0.03
PDE1B-204ENST00000542335 NGDNQ8NEJ9 315 aaKnown RBP15.26■□□□□ 0.03
PDE1B-204ENST00000542335 ZNF692Q9BU19 519 aaPredicted RBP15.26■□□□□ 0.03
PDE1B-204ENST00000542335 POLKQ9UBT6 870 aa15.26■□□□□ 0.03
PDE1B-204ENST00000542335 TOPAZ1Q8N9V7 1692 aa15.26■□□□□ 0.03
PDE1B-204ENST00000542335 DLG5Q8TDM6 1919 aa15.26■□□□□ 0.03
PDE1B-204ENST00000542335 C14orf37Q86TY3 774 aa15.25■□□□□ 0.03
PDE1B-204ENST00000542335 RSPH6AQ9H0K4 717 aa15.25■□□□□ 0.03
PDE1B-204ENST00000542335 RWDD1Q9H446 243 aaPredicted RBP15.25■□□□□ 0.03
PDE1B-204ENST00000542335 NRKQ7Z2Y5 1582 aa15.25■□□□□ 0.03
PDE1B-204ENST00000542335 RRS1Q15050 365 aaKnown RBP15.25■□□□□ 0.03
PDE1B-204ENST00000542335 EMILIN1Q9Y6C2 1016 aa15.25■□□□□ 0.03
PDE1B-204ENST00000542335 PTCH1Q13635 1447 aa15.25■□□□□ 0.03
PDE1B-204ENST00000542335 DIP2AQ14689 1571 aa15.24■□□□□ 0.03
PDE1B-204ENST00000542335 FTSJ3Q8IY81 847 aaKnown RBP15.24■□□□□ 0.03
PDE1B-204ENST00000542335 SMC4Q9NTJ3 1288 aa15.24■□□□□ 0.03
PDE1B-204ENST00000542335 ZNF142P52746 1687 aaPredicted RBP15.23■□□□□ 0.03
PDE1B-204ENST00000542335 SSH1Q8WYL5 1049 aa15.23■□□□□ 0.03
PDE1B-204ENST00000542335 FRAT2O75474 233 aaPredicted RBP15.22■□□□□ 0.03
PDE1B-204ENST00000542335 ALDH1L2Q3SY69 923 aa15.22■□□□□ 0.03
PDE1B-204ENST00000542335 TTC21BQ7Z4L5 1316 aa15.22■□□□□ 0.03
PDE1B-204ENST00000542335 KIF16BQ96L93 1317 aa15.22■□□□□ 0.03
PDE1B-204ENST00000542335 TRIM27P14373 513 aa15.22■□□□□ 0.03
PDE1B-204ENST00000542335 TAF7LQ5H9L4 462 aa15.22■□□□□ 0.03
PDE1B-204ENST00000542335 ATF7IPQ6VMQ6 1270 aa15.22■□□□□ 0.03
PDE1B-204ENST00000542335 ZNF428Q96B54 188 aa15.22■□□□□ 0.03
PDE1B-204ENST00000542335 DDX19BQ9UMR2 479 aa15.22■□□□□ 0.03
PDE1B-204ENST00000542335 RGPD8O14715 1765 aaPredicted RBP15.21■□□□□ 0.03
PDE1B-204ENST00000542335 PLEKHG3A1L390 1219 aa15.21■□□□□ 0.03
PDE1B-204ENST00000542335 USP19O94966 1318 aa15.21■□□□□ 0.03
PDE1B-204ENST00000542335 PDZRN3Q9UPQ7 1066 aa15.21■□□□□ 0.03
PDE1B-204ENST00000542335 NALCNQ8IZF0 1738 aa15.21■□□□□ 0.02
PDE1B-204ENST00000542335 NPHP4O75161 1426 aaPredicted RBP15.21■□□□□ 0.02
PDE1B-204ENST00000542335 XRN1Q8IZH2 1706 aaKnown RBP15.2■□□□□ 0.02
PDE1B-204ENST00000542335 PRKAR2BP31323 418 aa15.2■□□□□ 0.02
PDE1B-204ENST00000542335 BRPF1P55201 1214 aaPredicted RBP15.2■□□□□ 0.02
PDE1B-204ENST00000542335 PIK3R4Q99570 1358 aa15.2■□□□□ 0.02
PDE1B-204ENST00000542335 IL13P35225 146 aa15.19■□□□□ 0.02
PDE1B-204ENST00000542335 HSPA2P54652 639 aa15.19■□□□□ 0.02
PDE1B-204ENST00000542335 HDAC1Q13547 482 aaPredicted RBP15.19■□□□□ 0.02
PDE1B-204ENST00000542335 NFE2L2Q16236 605 aa15.19■□□□□ 0.02
PDE1B-204ENST00000542335 NUTM2GQ5VZR2 741 aa15.19■□□□□ 0.02
PDE1B-204ENST00000542335 HMOX1P09601 288 aa15.19■□□□□ 0.02
PDE1B-204ENST00000542335 CALD1Q05682 793 aaKnown RBP15.19■□□□□ 0.02
PDE1B-204ENST00000542335 USP6P35125 1406 aa15.18■□□□□ 0.02
PDE1B-204ENST00000542335 IPO8O15397 1037 aaKnown RBP15.18■□□□□ 0.02
PDE1B-204ENST00000542335 NOB1Q9ULX3 412 aaKnown RBP15.18■□□□□ 0.02
PDE1B-204ENST00000542335 CHD2O14647 1828 aaKnown RBP15.17■□□□□ 0.02
PDE1B-204ENST00000542335 ESCO1Q5FWF5 840 aa15.15■□□□□ 0.02
PDE1B-204ENST00000542335 ITPRIPQ8IWB1 547 aa15.15■□□□□ 0.02
PDE1B-204ENST00000542335 IFT57Q9NWB7 429 aa15.15■□□□□ 0.02
PDE1B-204ENST00000542335 PROSER2Q86WR7 435 aaPredicted RBP15.15■□□□□ 0.02
PDE1B-204ENST00000542335 PHACTR3Q96KR7 559 aa15.15■□□□□ 0.02
PDE1B-204ENST00000542335 RGPD1P0DJD0 1748 aa15.15■□□□□ 0.02
PDE1B-204ENST00000542335 TMEM57Q8N5G2 664 aa15.14■□□□□ 0.01
PDE1B-204ENST00000542335 ZBTB40Q9NUA8 1239 aa15.14■□□□□ 0.01
PDE1B-204ENST00000542335 SEC24BO95487 1268 aa15.14■□□□□ 0.01
PDE1B-204ENST00000542335 ZNF853P0CG23 659 aa15.14■□□□□ 0.01
PDE1B-204ENST00000542335 GNAI1P63096 354 aa15.14■□□□□ 0.01
PDE1B-204ENST00000542335 LMOD3Q0VAK6 560 aa15.14■□□□□ 0.01
PDE1B-204ENST00000542335 NLRP6P59044 892 aa15.13■□□□□ 0.01
PDE1B-204ENST00000542335 SMC5Q8IY18 1101 aa15.13■□□□□ 0.01
PDE1B-204ENST00000542335 ARHGAP45Q92619 1136 aa15.13■□□□□ 0.01
PDE1B-204ENST00000542335 FMN2Q9NZ56 1722 aa15.13■□□□□ 0.01
PDE1B-204ENST00000542335 OVOS2A0A0J9YW53 1432 aa15.13■□□□□ 0.01
PDE1B-204ENST00000542335 OVOS2Q6IE36 1432 aa15.13■□□□□ 0.01
PDE1B-204ENST00000542335 PHF8Q9UPP1 1060 aa15.13■□□□□ 0.01
PDE1B-204ENST00000542335 ABTB2Q8N961 1025 aa15.12■□□□□ 0.01
PDE1B-204ENST00000542335 XPCQ01831 940 aaPredicted RBP15.12■□□□□ 0.01
PDE1B-204ENST00000542335 UPF2Q9HAU5 1272 aaKnown RBP15.12■□□□□ 0.01
PDE1B-204ENST00000542335 PEAK1Q9H792 1746 aa15.11■□□□□ 0.01
PDE1B-204ENST00000542335 VAMP4O75379 141 aa15.11■□□□□ 0.01
PDE1B-204ENST00000542335 HSP90AB2PQ58FF8 381 aa15.11■□□□□ 0.01
PDE1B-204ENST00000542335 TBC1D32Q96NH3 1257 aa15.11■□□□□ 0.01
PDE1B-204ENST00000542335 MRPL50Q8N5N7 158 aaKnown RBP15.1■□□□□ 0.01
PDE1B-204ENST00000542335 CHMP4BQ9H444 224 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms