RNA–Protein interactions for RNA: ENST00000541869.5

POLR1B-217, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 5,059 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-217ENST00000541869 PLCB2Q00722 1185 aa12.57□□□□□ -0.4
POLR1B-217ENST00000541869 TRIM29Q14134 588 aa12.57□□□□□ -0.4
POLR1B-217ENST00000541869 ANKIB1Q9P2G1 1089 aa12.57□□□□□ -0.4
POLR1B-217ENST00000541869 ADAMTS8Q9UP79 889 aa12.57□□□□□ -0.4
POLR1B-217ENST00000541869 ACEP12821 1306 aa12.57□□□□□ -0.4
POLR1B-217ENST00000541869 MYL6BP14649 208 aa12.57□□□□□ -0.4
POLR1B-217ENST00000541869 NFXL1Q6ZNB6 911 aa12.57□□□□□ -0.4
POLR1B-217ENST00000541869 NINLQ9Y2I6 1382 aa12.56□□□□□ -0.4
POLR1B-217ENST00000541869 C6orf229H3BNL8 230 aa12.56□□□□□ -0.4
POLR1B-217ENST00000541869 COG6Q9Y2V7 657 aa12.56□□□□□ -0.4
POLR1B-217ENST00000541869 MYO1BO43795 1136 aa12.56□□□□□ -0.4
POLR1B-217ENST00000541869 TMEM132AQ24JP5 1023 aa12.56□□□□□ -0.4
POLR1B-217ENST00000541869 CCDC158Q5M9N0 1113 aa12.56□□□□□ -0.4
POLR1B-217ENST00000541869 TTC21AQ8NDW8 1320 aa12.56□□□□□ -0.4
POLR1B-217ENST00000541869 KCNA6P17658 529 aa12.55□□□□□ -0.4
POLR1B-217ENST00000541869 RALYLQ86SE5 291 aaKnown RBP12.55□□□□□ -0.4
POLR1B-217ENST00000541869 ZBED9Q6R2W3 1325 aa12.55□□□□□ -0.4
POLR1B-217ENST00000541869 CPLX1O14810 134 aa12.55□□□□□ -0.4
POLR1B-217ENST00000541869 IFNL2Q8IZJ0 200 aa12.55□□□□□ -0.4
POLR1B-217ENST00000541869 MFAP1P55081 439 aaKnown RBP12.55□□□□□ -0.4
POLR1B-217ENST00000541869 WDR78Q5VTH9 848 aa12.54□□□□□ -0.4
POLR1B-217ENST00000541869 ZKSCAN1P17029 563 aaPredicted RBP12.54□□□□□ -0.4
POLR1B-217ENST00000541869 SF3A1Q15459 793 aaKnown RBP12.54□□□□□ -0.4
POLR1B-217ENST00000541869 DISP1Q96F81 1524 aa12.54□□□□□ -0.4
POLR1B-217ENST00000541869 TTC21BQ7Z4L5 1316 aa12.53□□□□□ -0.4
POLR1B-217ENST00000541869 MPHOSPH10O00566 681 aaKnown RBP12.53□□□□□ -0.4
POLR1B-217ENST00000541869 SART3Q15020 963 aaKnown RBP12.53□□□□□ -0.4
POLR1B-217ENST00000541869 SCAF11Q99590 1463 aaKnown RBP12.53□□□□□ -0.4
POLR1B-217ENST00000541869 ACSBG1Q96GR2 724 aa12.53□□□□□ -0.4
POLR1B-217ENST00000541869 MTMR7Q9Y216 660 aa12.53□□□□□ -0.4
POLR1B-217ENST00000541869 SLC4A2P04920 1241 aa12.53□□□□□ -0.4
POLR1B-217ENST00000541869 RNF20Q5VTR2 975 aa12.53□□□□□ -0.4
POLR1B-217ENST00000541869 DDX46Q7L014 1031 aaKnown RBP12.53□□□□□ -0.4
POLR1B-217ENST00000541869 CLASRPQ8N2M8 674 aaKnown RBP12.53□□□□□ -0.4
POLR1B-217ENST00000541869 TMEM87AQ8NBN3 555 aa12.53□□□□□ -0.4
POLR1B-217ENST00000541869 ANKRD24Q8TF21 1146 aa12.53□□□□□ -0.4
POLR1B-217ENST00000541869 CCDC47Q96A33 483 aaKnown RBP12.53□□□□□ -0.4
POLR1B-217ENST00000541869 SLAIN2Q9P270 581 aa12.53□□□□□ -0.4
POLR1B-217ENST00000541869 AAMPQ13685 434 aa12.52□□□□□ -0.4
POLR1B-217ENST00000541869 ERC1Q8IUD2 1116 aa12.52□□□□□ -0.4
POLR1B-217ENST00000541869 ABCA5Q8WWZ7 1642 aa12.52□□□□□ -0.4
POLR1B-217ENST00000541869 APBA3O96018 575 aa12.52□□□□□ -0.4
POLR1B-217ENST00000541869 MYCNP04198 464 aaPredicted RBP12.52□□□□□ -0.41
POLR1B-217ENST00000541869 FAM184AQ8NB25 1140 aa12.52□□□□□ -0.41
POLR1B-217ENST00000541869 SRCIN1Q9C0H9 1055 aa12.52□□□□□ -0.41
POLR1B-217ENST00000541869 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.52□□□□□ -0.41
POLR1B-217ENST00000541869 TRPC5Q9UL62 973 aaPredicted RBP12.52□□□□□ -0.41
POLR1B-217ENST00000541869 ST18O60284 1047 aa12.52□□□□□ -0.41
POLR1B-217ENST00000541869 NFE2L2Q16236 605 aa12.52□□□□□ -0.41
POLR1B-217ENST00000541869 ZCRB1Q8TBF4 217 aaKnown RBP12.51□□□□□ -0.41
POLR1B-217ENST00000541869 CAVIN4Q5BKX8 364 aa12.51□□□□□ -0.41
POLR1B-217ENST00000541869 NBPF6Q5VWK0 638 aa12.51□□□□□ -0.41
POLR1B-217ENST00000541869 NBPF5PQ86XG9 351 aaPredicted RBP12.51□□□□□ -0.41
POLR1B-217ENST00000541869 SLF2Q8IX21 1173 aa12.51□□□□□ -0.41
POLR1B-217ENST00000541869 NBPF4Q96M43 638 aa12.51□□□□□ -0.41
POLR1B-217ENST00000541869 ZFYVE16Q7Z3T8 1539 aa12.51□□□□□ -0.41
POLR1B-217ENST00000541869 TTC39AQ5SRH9 613 aa12.51□□□□□ -0.41
POLR1B-217ENST00000541869 HDAC9Q9UKV0 1011 aa12.51□□□□□ -0.41
POLR1B-217ENST00000541869 RTCBQ9Y3I0 505 aaKnown RBP12.51□□□□□ -0.41
POLR1B-217ENST00000541869 AMER1Q5JTC6 1135 aaPredicted RBP12.51□□□□□ -0.41
POLR1B-217ENST00000541869 CRACR2BQ8N4Y2 399 aaPredicted RBP12.51□□□□□ -0.41
POLR1B-217ENST00000541869 USHBP1Q8N6Y0 703 aa12.51□□□□□ -0.41
POLR1B-217ENST00000541869 NACAP1Q9BZK3 213 aa12.51□□□□□ -0.41
POLR1B-217ENST00000541869 CCT4P50991 539 aaKnown RBP12.5□□□□□ -0.41
POLR1B-217ENST00000541869 EXOSC9Q06265 439 aaKnown RBP12.5□□□□□ -0.41
POLR1B-217ENST00000541869 TRIM44Q96DX7 344 aaPredicted RBP12.5□□□□□ -0.41
POLR1B-217ENST00000541869 CEP126Q9P2H0 1117 aa12.5□□□□□ -0.41
POLR1B-217ENST00000541869 PPP1R42Q7Z4L9 355 aa12.5□□□□□ -0.41
POLR1B-217ENST00000541869 OGFOD1Q8N543 542 aa12.5□□□□□ -0.41
POLR1B-217ENST00000541869 CENPQQ7L2Z9 268 aaPredicted RBP12.5□□□□□ -0.41
POLR1B-217ENST00000541869 FMNL2Q96PY5 1086 aa12.5□□□□□ -0.41
POLR1B-217ENST00000541869 SURF6O75683 361 aaKnown RBP12.49□□□□□ -0.41
POLR1B-217ENST00000541869 TAF7Q15545 349 aaPredicted RBP12.49□□□□□ -0.41
POLR1B-217ENST00000541869 ATF7IPQ6VMQ6 1270 aa12.49□□□□□ -0.41
POLR1B-217ENST00000541869 BTG4Q9NY30 223 aa12.49□□□□□ -0.41
POLR1B-217ENST00000541869 RRP1P56182 461 aaKnown RBP12.49□□□□□ -0.41
POLR1B-217ENST00000541869 WDR63Q8IWG1 891 aa12.49□□□□□ -0.41
POLR1B-217ENST00000541869 REC8O95072 547 aa12.49□□□□□ -0.41
POLR1B-217ENST00000541869 ATP6V1AP38606 617 aa12.49□□□□□ -0.41
POLR1B-217ENST00000541869 SETDB2Q96T68 719 aa12.49□□□□□ -0.41
POLR1B-217ENST00000541869 TRMT112Q9UI30 125 aaKnown RBP12.49□□□□□ -0.41
POLR1B-217ENST00000541869 NSD2O96028 1365 aa12.48□□□□□ -0.41
POLR1B-217ENST00000541869 CT47B1P0C2W7 299 aaPredicted RBP12.48□□□□□ -0.41
POLR1B-217ENST00000541869 IL2RBP14784 551 aa12.48□□□□□ -0.41
POLR1B-217ENST00000541869 QTRT2Q9H974 415 aaKnown RBP12.48□□□□□ -0.41
POLR1B-217ENST00000541869 H3BQV1 296 aa12.48□□□□□ -0.41
POLR1B-217ENST00000541869 IFFO2Q5TF58 517 aa12.48□□□□□ -0.41
POLR1B-217ENST00000541869 GNAI2P04899 355 aa12.48□□□□□ -0.41
POLR1B-217ENST00000541869 TPM4P67936 248 aa12.48□□□□□ -0.41
POLR1B-217ENST00000541869 IFIT1P09914 478 aaKnown RBP12.48□□□□□ -0.41
POLR1B-217ENST00000541869 CSPP1Q1MSJ5 1256 aa12.48□□□□□ -0.41
POLR1B-217ENST00000541869 XBP1P17861 261 aa12.47□□□□□ -0.41
POLR1B-217ENST00000541869 RAI14Q9P0K7 980 aa12.47□□□□□ -0.41
POLR1B-217ENST00000541869 SAFBQ15424 915 aaKnown RBP eCLIP12.47□□□□□ -0.41
POLR1B-217ENST00000541869 EMILIN1Q9Y6C2 1016 aa12.47□□□□□ -0.41
POLR1B-217ENST00000541869 CFAP74Q9C0B2 1584 aa12.47□□□□□ -0.41
POLR1B-217ENST00000541869 BRMS1Q9HCU9 246 aa12.47□□□□□ -0.41
POLR1B-217ENST00000541869 ZSCAN25Q6NSZ9 544 aa12.47□□□□□ -0.41
POLR1B-217ENST00000541869 ZNF287Q9HBT7 754 aa12.47□□□□□ -0.41
POLR1B-217ENST00000541869 SHANK2Q9UPX8 1470 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms