RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 C8orf58Q8NAV2 365 aa17.61■□□□□ 0.41
GCFC2-211ENST00000541687 RBM42Q9BTD8 480 aaKnown RBP17.61■□□□□ 0.41
GCFC2-211ENST00000541687 BCORL1Q5H9F3 1711 aa17.61■□□□□ 0.41
GCFC2-211ENST00000541687 AEBP1Q8IUX7 1158 aa17.61■□□□□ 0.41
GCFC2-211ENST00000541687 FAM43AQ8N2R8 423 aa17.61■□□□□ 0.41
GCFC2-211ENST00000541687 CEBPAP49715 358 aaPredicted RBP17.6■□□□□ 0.41
GCFC2-211ENST00000541687 LRRCC1Q9C099 1032 aa17.6■□□□□ 0.41
GCFC2-211ENST00000541687 A0A1W2PP64 1363 aa17.6■□□□□ 0.41
GCFC2-211ENST00000541687 PLA2R1Q13018 1463 aa17.6■□□□□ 0.41
GCFC2-211ENST00000541687 WDR7Q9Y4E6 1490 aa17.6■□□□□ 0.41
GCFC2-211ENST00000541687 ESCO1Q5FWF5 840 aa17.6■□□□□ 0.41
GCFC2-211ENST00000541687 USHBP1Q8N6Y0 703 aa17.6■□□□□ 0.41
GCFC2-211ENST00000541687 ADGBQ8N7X0 1667 aa17.6■□□□□ 0.41
GCFC2-211ENST00000541687 ZKSCAN1P17029 563 aaPredicted RBP17.59■□□□□ 0.41
GCFC2-211ENST00000541687 SSFA2P28290 1259 aa17.59■□□□□ 0.41
GCFC2-211ENST00000541687 TNPO1Q92973 898 aaKnown RBP17.59■□□□□ 0.41
GCFC2-211ENST00000541687 PHF14O94880 888 aa17.59■□□□□ 0.41
GCFC2-211ENST00000541687 NSD2O96028 1365 aa17.59■□□□□ 0.41
GCFC2-211ENST00000541687 XPCQ01831 940 aaPredicted RBP17.59■□□□□ 0.41
GCFC2-211ENST00000541687 RPAP2Q8IXW5 612 aaPredicted RBP17.59■□□□□ 0.41
GCFC2-211ENST00000541687 UPF3BQ9BZI7 483 aaKnown RBP17.59■□□□□ 0.41
GCFC2-211ENST00000541687 SMC3Q9UQE7 1217 aa17.59■□□□□ 0.41
GCFC2-211ENST00000541687 ABCC2Q92887 1545 aa17.59■□□□□ 0.41
GCFC2-211ENST00000541687 NEXNQ0ZGT2 675 aa17.59■□□□□ 0.41
GCFC2-211ENST00000541687 G3BP1Q13283 466 aaKnown RBP eCLIP17.59■□□□□ 0.41
GCFC2-211ENST00000541687 HDAC1Q13547 482 aaPredicted RBP17.58■□□□□ 0.41
GCFC2-211ENST00000541687 CFAP65Q6ZU64 1925 aaKnown RBP17.58■□□□□ 0.41
GCFC2-211ENST00000541687 CCT4P50991 539 aaKnown RBP17.58■□□□□ 0.41
GCFC2-211ENST00000541687 HSP90AB2PQ58FF8 381 aa17.58■□□□□ 0.41
GCFC2-211ENST00000541687 TAF7LQ5H9L4 462 aa17.58■□□□□ 0.41
GCFC2-211ENST00000541687 RUFY2Q8WXA3 655 aa17.58■□□□□ 0.41
GCFC2-211ENST00000541687 VSIG10Q8N0Z9 540 aa17.58■□□□□ 0.4
GCFC2-211ENST00000541687 FOSBP53539 338 aa17.58■□□□□ 0.4
GCFC2-211ENST00000541687 C16orf71Q8IYS4 520 aaPredicted RBP17.57■□□□□ 0.4
GCFC2-211ENST00000541687 NLRP2Q9NX02 1062 aa17.57■□□□□ 0.4
GCFC2-211ENST00000541687 MAST1Q9Y2H9 1570 aa17.57■□□□□ 0.4
GCFC2-211ENST00000541687 NUCB1Q02818 461 aa17.57■□□□□ 0.4
GCFC2-211ENST00000541687 NUTM1Q86Y26 1132 aa17.57■□□□□ 0.4
GCFC2-211ENST00000541687 GNL2Q13823 731 aaKnown RBP17.56■□□□□ 0.4
GCFC2-211ENST00000541687 CLASRPQ8N2M8 674 aaKnown RBP17.56■□□□□ 0.4
GCFC2-211ENST00000541687 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.56■□□□□ 0.4
GCFC2-211ENST00000541687 RIC3Q7Z5B4 369 aa17.56■□□□□ 0.4
GCFC2-211ENST00000541687 SRGAP3O43295 1099 aa17.56■□□□□ 0.4
GCFC2-211ENST00000541687 BMP2KLQ5H9B9 411 aa17.56■□□□□ 0.4
GCFC2-211ENST00000541687 SAMD9LQ8IVG5 1584 aa17.56■□□□□ 0.4
GCFC2-211ENST00000541687 TTC5Q8N0Z6 440 aa17.55■□□□□ 0.4
GCFC2-211ENST00000541687 H3BQV1 296 aa17.55■□□□□ 0.4
GCFC2-211ENST00000541687 IFFO2Q5TF58 517 aa17.55■□□□□ 0.4
GCFC2-211ENST00000541687 ZBTB40Q9NUA8 1239 aa17.55■□□□□ 0.4
GCFC2-211ENST00000541687 ATP6V1DQ9Y5K8 247 aa17.55■□□□□ 0.4
GCFC2-211ENST00000541687 MEIS3Q99687 375 aa17.54■□□□□ 0.4
GCFC2-211ENST00000541687 SIL1Q9H173 461 aa17.54■□□□□ 0.4
GCFC2-211ENST00000541687 TRIM35Q9UPQ4 493 aa17.54■□□□□ 0.4
GCFC2-211ENST00000541687 ABCA8O94911 1581 aa17.54■□□□□ 0.4
GCFC2-211ENST00000541687 NPC1L1Q9UHC9 1359 aa17.54■□□□□ 0.4
GCFC2-211ENST00000541687 SRCIN1Q9C0H9 1055 aa17.54■□□□□ 0.4
GCFC2-211ENST00000541687 VAMP4O75379 141 aa17.54■□□□□ 0.4
GCFC2-211ENST00000541687 IL16Q14005 1332 aa17.54■□□□□ 0.4
GCFC2-211ENST00000541687 FIBPO43427 364 aa17.53■□□□□ 0.4
GCFC2-211ENST00000541687 CSPP1Q1MSJ5 1256 aa17.53■□□□□ 0.4
GCFC2-211ENST00000541687 PANK2Q9BZ23 570 aa17.53■□□□□ 0.4
GCFC2-211ENST00000541687 FAM184AQ8NB25 1140 aa17.53■□□□□ 0.4
GCFC2-211ENST00000541687 FAM13BQ9NYF5 915 aa17.53■□□□□ 0.4
GCFC2-211ENST00000541687 ZNF530Q6P9A1 599 aaPredicted RBP17.53■□□□□ 0.4
GCFC2-211ENST00000541687 CIZ1Q9ULV3 898 aaPredicted RBP17.53■□□□□ 0.4
GCFC2-211ENST00000541687 PTPRTO14522 1441 aa17.53■□□□□ 0.4
GCFC2-211ENST00000541687 ZNF518AQ6AHZ1 1483 aa17.53■□□□□ 0.4
GCFC2-211ENST00000541687 DDX58O95786 925 aaKnown RBP17.53■□□□□ 0.4
GCFC2-211ENST00000541687 CNTROBQ8N137 903 aa17.53■□□□□ 0.4
GCFC2-211ENST00000541687 DDX54Q8TDD1 881 aaKnown RBP17.53■□□□□ 0.4
GCFC2-211ENST00000541687 MRPL50Q8N5N7 158 aaKnown RBP17.52■□□□□ 0.4
GCFC2-211ENST00000541687 RAPGEF4Q8WZA2 1011 aa17.52■□□□□ 0.4
GCFC2-211ENST00000541687 LARP6Q9BRS8 491 aaKnown RBP17.52■□□□□ 0.4
GCFC2-211ENST00000541687 HSP90AB4PQ58FF6 505 aa17.52■□□□□ 0.39
GCFC2-211ENST00000541687 ZNF521Q96K83 1311 aa17.52■□□□□ 0.39
GCFC2-211ENST00000541687 CWC27Q6UX04 472 aaKnown RBP17.51■□□□□ 0.39
GCFC2-211ENST00000541687 ACEP12821 1306 aa17.51■□□□□ 0.39
GCFC2-211ENST00000541687 UGGT1Q9NYU2 1555 aa17.51■□□□□ 0.39
GCFC2-211ENST00000541687 R3HCC1Q9Y3T6 440 aaKnown RBP17.51■□□□□ 0.39
GCFC2-211ENST00000541687 SMC5Q8IY18 1101 aa17.51■□□□□ 0.39
GCFC2-211ENST00000541687 NEUROD6Q96NK8 337 aa17.51■□□□□ 0.39
GCFC2-211ENST00000541687 ARHGEF5Q12774 1597 aa17.5■□□□□ 0.39
GCFC2-211ENST00000541687 ATP10AO60312 1499 aa17.5■□□□□ 0.39
GCFC2-211ENST00000541687 FSD1Q9BTV5 496 aa17.5■□□□□ 0.39
GCFC2-211ENST00000541687 NPHP1O15259 732 aa17.5■□□□□ 0.39
GCFC2-211ENST00000541687 GNAT3A8MTJ3 354 aa17.5■□□□□ 0.39
GCFC2-211ENST00000541687 ESPNB1AK53 854 aa17.5■□□□□ 0.39
GCFC2-211ENST00000541687 HTATSF1O43719 755 aaKnown RBP17.49■□□□□ 0.39
GCFC2-211ENST00000541687 FBXW7Q969H0 707 aa17.49■□□□□ 0.39
GCFC2-211ENST00000541687 AMOTL2Q9Y2J4 779 aa17.49■□□□□ 0.39
GCFC2-211ENST00000541687 LRRFIP2Q9Y608 721 aaKnown RBP17.49■□□□□ 0.39
GCFC2-211ENST00000541687 MX1P20591 662 aa17.49■□□□□ 0.39
GCFC2-211ENST00000541687 FOXO3O43524 673 aa17.49■□□□□ 0.39
GCFC2-211ENST00000541687 ANXA1P04083 346 aa17.48■□□□□ 0.39
GCFC2-211ENST00000541687 BICD2Q8TD16 824 aa17.48■□□□□ 0.39
GCFC2-211ENST00000541687 SF3A1Q15459 793 aaKnown RBP17.48■□□□□ 0.39
GCFC2-211ENST00000541687 TOMM22Q9NS69 142 aa17.48■□□□□ 0.39
GCFC2-211ENST00000541687 ATP7AQ04656 1500 aa17.48■□□□□ 0.39
GCFC2-211ENST00000541687 MYL6BP14649 208 aa17.48■□□□□ 0.39
GCFC2-211ENST00000541687 TRMT2AQ8IZ69 625 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms