RNA–Protein interactions for RNA: ENST00000541478.5

OTUB1-210, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-210ENST00000541478 PHACTR3Q96KR7 559 aa26.05■■□□□ 1.76
OTUB1-210ENST00000541478 MAP3K19Q56UN5 1328 aa26.05■■□□□ 1.76
OTUB1-210ENST00000541478 KIF24Q5T7B8 1368 aa26.05■■□□□ 1.76
OTUB1-210ENST00000541478 SOX12O15370 315 aa26.04■■□□□ 1.76
OTUB1-210ENST00000541478 TSR2Q969E8 191 aaKnown RBP26.03■■□□□ 1.76
OTUB1-210ENST00000541478 RBM33Q96EV2 1170 aaKnown RBP26.03■■□□□ 1.76
OTUB1-210ENST00000541478 HSP90AB2PQ58FF8 381 aa26.02■■□□□ 1.76
OTUB1-210ENST00000541478 ABTB2Q8N961 1025 aa26.02■■□□□ 1.76
OTUB1-210ENST00000541478 ARHGEF10O15013 1369 aa26.01■■□□□ 1.75
OTUB1-210ENST00000541478 PAK3O75914 559 aaPredicted RBP26.01■■□□□ 1.75
OTUB1-210ENST00000541478 RGPD1P0DJD0 1748 aa26.01■■□□□ 1.75
OTUB1-210ENST00000541478 ESCO1Q5FWF5 840 aa26.01■■□□□ 1.75
OTUB1-210ENST00000541478 AMPHP49418 695 aa26■■□□□ 1.75
OTUB1-210ENST00000541478 STRCQ7RTU9 1775 aa26■■□□□ 1.75
OTUB1-210ENST00000541478 EXOSC9Q06265 439 aaKnown RBP26■■□□□ 1.75
OTUB1-210ENST00000541478 SULT6B1Q6IMI4 303 aa26■■□□□ 1.75
OTUB1-210ENST00000541478 PROSER2Q86WR7 435 aaPredicted RBP25.99■■□□□ 1.75
OTUB1-210ENST00000541478 RBM19Q9Y4C8 960 aaKnown RBP25.99■■□□□ 1.75
OTUB1-210ENST00000541478 FRAT1Q92837 279 aaPredicted RBP25.98■■□□□ 1.75
OTUB1-210ENST00000541478 MARF1Q9Y4F3 1742 aaKnown RBP25.98■■□□□ 1.75
OTUB1-210ENST00000541478 PSME1Q06323 249 aa25.97■■□□□ 1.75
OTUB1-210ENST00000541478 GNAI1P63096 354 aa25.96■■□□□ 1.75
OTUB1-210ENST00000541478 IFT57Q9NWB7 429 aa25.96■■□□□ 1.75
OTUB1-210ENST00000541478 AAMPQ13685 434 aa25.95■■□□□ 1.74
OTUB1-210ENST00000541478 AEBP1Q8IUX7 1158 aa25.95■■□□□ 1.74
OTUB1-210ENST00000541478 ZNF428Q96B54 188 aa25.95■■□□□ 1.74
OTUB1-210ENST00000541478 DLG5Q8TDM6 1919 aa25.94■■□□□ 1.74
OTUB1-210ENST00000541478 MS4A1P11836 297 aa25.94■■□□□ 1.74
OTUB1-210ENST00000541478 RTL1A6NKG5 1358 aa25.94■■□□□ 1.74
OTUB1-210ENST00000541478 CENPQQ7L2Z9 268 aaPredicted RBP25.93■■□□□ 1.74
OTUB1-210ENST00000541478 BCL2L13Q9BXK5 485 aa25.93■■□□□ 1.74
OTUB1-210ENST00000541478 NUTM2GQ5VZR2 741 aa25.93■■□□□ 1.74
OTUB1-210ENST00000541478 C19orf44Q9H6X5 657 aa25.93■■□□□ 1.74
OTUB1-210ENST00000541478 SMC4Q9NTJ3 1288 aa25.93■■□□□ 1.74
OTUB1-210ENST00000541478 KDRP35968 1356 aa25.91■■□□□ 1.74
OTUB1-210ENST00000541478 NCOA3Q9Y6Q9 1424 aa25.91■■□□□ 1.74
OTUB1-210ENST00000541478 KIF1AQ12756 1690 aa25.91■■□□□ 1.74
OTUB1-210ENST00000541478 HOXC9P31274 260 aa25.91■■□□□ 1.74
OTUB1-210ENST00000541478 ZKSCAN2Q63HK3 967 aa25.91■■□□□ 1.74
OTUB1-210ENST00000541478 LAS1LQ9Y4W2 734 aaKnown RBP25.91■■□□□ 1.74
OTUB1-210ENST00000541478 IGSF1Q8N6C5 1336 aa25.9■■□□□ 1.74
OTUB1-210ENST00000541478 KDM2BQ8NHM5 1336 aa25.9■■□□□ 1.74
OTUB1-210ENST00000541478 PANK1Q8TE04 598 aa25.9■■□□□ 1.74
OTUB1-210ENST00000541478 ALDH1L2Q3SY69 923 aa25.89■■□□□ 1.74
OTUB1-210ENST00000541478 KCNH5Q8NCM2 988 aa25.89■■□□□ 1.74
OTUB1-210ENST00000541478 CFAP44Q96MT7 982 aa25.89■■□□□ 1.74
OTUB1-210ENST00000541478 ZNF853P0CG23 659 aa25.88■■□□□ 1.73
OTUB1-210ENST00000541478 COG6Q9Y2V7 657 aa25.88■■□□□ 1.73
OTUB1-210ENST00000541478 DCCP43146 1447 aa25.88■■□□□ 1.73
OTUB1-210ENST00000541478 TCERG1O14776 1098 aaKnown RBP25.88■■□□□ 1.73
OTUB1-210ENST00000541478 THUMPD2Q9BTF0 503 aaKnown RBP25.88■■□□□ 1.73
OTUB1-210ENST00000541478 KIF16BQ96L93 1317 aa25.88■■□□□ 1.73
OTUB1-210ENST00000541478 C1orf167Q5SNV9 1468 aa25.87■■□□□ 1.73
OTUB1-210ENST00000541478 SSH1Q8WYL5 1049 aa25.86■■□□□ 1.73
OTUB1-210ENST00000541478 CLUAP1Q96AJ1 413 aa25.86■■□□□ 1.73
OTUB1-210ENST00000541478 ORAI2Q96SN7 254 aa25.86■■□□□ 1.73
OTUB1-210ENST00000541478 FTSJ3Q8IY81 847 aaKnown RBP25.86■■□□□ 1.73
OTUB1-210ENST00000541478 EYA1Q99502 592 aa25.86■■□□□ 1.73
OTUB1-210ENST00000541478 NFAT5O94916 1531 aa25.85■■□□□ 1.73
OTUB1-210ENST00000541478 MBIPQ9NS73 344 aa25.84■■□□□ 1.73
OTUB1-210ENST00000541478 TMEM94Q12767 1356 aa25.84■■□□□ 1.73
OTUB1-210ENST00000541478 IPO8O15397 1037 aaKnown RBP25.84■■□□□ 1.73
OTUB1-210ENST00000541478 FOXO3O43524 673 aa25.84■■□□□ 1.73
OTUB1-210ENST00000541478 ATF3P18847 181 aa25.84■■□□□ 1.73
OTUB1-210ENST00000541478 DZIP1LQ8IYY4 767 aaKnown RBP25.84■■□□□ 1.73
OTUB1-210ENST00000541478 LTN1O94822 1766 aa25.83■■□□□ 1.73
OTUB1-210ENST00000541478 FAM83GA6ND36 823 aa25.83■■□□□ 1.73
OTUB1-210ENST00000541478 GAS2L2Q8NHY3 880 aa25.82■■□□□ 1.72
OTUB1-210ENST00000541478 RLBP1P12271 317 aa25.81■■□□□ 1.72
OTUB1-210ENST00000541478 BRPF1P55201 1214 aaPredicted RBP25.81■■□□□ 1.72
OTUB1-210ENST00000541478 ATF7IPQ6VMQ6 1270 aa25.81■■□□□ 1.72
OTUB1-210ENST00000541478 PHRF1Q9P1Y6 1649 aaKnown RBP25.81■■□□□ 1.72
OTUB1-210ENST00000541478 MVPQ14764 893 aaKnown RBP25.81■■□□□ 1.72
OTUB1-210ENST00000541478 IP6K1Q92551 441 aa25.81■■□□□ 1.72
OTUB1-210ENST00000541478 STRCP1A6NGW2 1772 aa25.79■■□□□ 1.72
OTUB1-210ENST00000541478 SLIT3O75094 1523 aa25.79■■□□□ 1.72
OTUB1-210ENST00000541478 TRPM3Q9HCF6 1732 aaPredicted RBP25.79■■□□□ 1.72
OTUB1-210ENST00000541478 TRIM27P14373 513 aa25.79■■□□□ 1.72
OTUB1-210ENST00000541478 HAP1P54257 671 aaPredicted RBP25.79■■□□□ 1.72
OTUB1-210ENST00000541478 DCTN1Q14203 1278 aa25.79■■□□□ 1.72
OTUB1-210ENST00000541478 MST1RQ04912 1400 aa25.79■■□□□ 1.72
OTUB1-210ENST00000541478 VAMP4O75379 141 aa25.78■■□□□ 1.72
OTUB1-210ENST00000541478 RTF1Q92541 710 aaKnown RBP25.78■■□□□ 1.72
OTUB1-210ENST00000541478 KRT28Q7Z3Y7 464 aa25.77■■□□□ 1.72
OTUB1-210ENST00000541478 NOB1Q9ULX3 412 aaKnown RBP25.77■■□□□ 1.72
OTUB1-210ENST00000541478 MTHFSDQ2M296 383 aaKnown RBP25.77■■□□□ 1.72
OTUB1-210ENST00000541478 TWISTNBQ3B726 338 aaPredicted RBP25.77■■□□□ 1.72
OTUB1-210ENST00000541478 CADPS2Q86UW7 1296 aa25.77■■□□□ 1.72
OTUB1-210ENST00000541478 TNNQ9UQP3 1299 aa25.77■■□□□ 1.72
OTUB1-210ENST00000541478 HTATSF1O43719 755 aaKnown RBP25.74■■□□□ 1.71
OTUB1-210ENST00000541478 XPCQ01831 940 aaPredicted RBP25.74■■□□□ 1.71
OTUB1-210ENST00000541478 MCM10Q7L590 875 aa25.74■■□□□ 1.71
OTUB1-210ENST00000541478 DDX19BQ9UMR2 479 aa25.74■■□□□ 1.71
OTUB1-210ENST00000541478 USP19O94966 1318 aa25.74■■□□□ 1.71
OTUB1-210ENST00000541478 MSH6P52701 1360 aa25.74■■□□□ 1.71
OTUB1-210ENST00000541478 GCP02774 474 aa25.74■■□□□ 1.71
OTUB1-210ENST00000541478 LTV1Q96GA3 475 aaPredicted RBP25.74■■□□□ 1.71
OTUB1-210ENST00000541478 CHL1O00533 1208 aa25.73■■□□□ 1.71
OTUB1-210ENST00000541478 LMOD2Q6P5Q4 547 aa25.72■■□□□ 1.71
OTUB1-210ENST00000541478 TSPYL6Q8N831 410 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms