RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 ABCC6O95255 1503 aa9.68□□□□□ -0.86
LPCAT3-209ENST00000540060 USP31Q70CQ4 1352 aa9.68□□□□□ -0.86
LPCAT3-209ENST00000540060 WASHC2AQ641Q2 1341 aa9.68□□□□□ -0.86
LPCAT3-209ENST00000540060 ABTB2Q8N961 1025 aa9.68□□□□□ -0.86
LPCAT3-209ENST00000540060 POLR3GLQ9BT43 218 aa9.68□□□□□ -0.86
LPCAT3-209ENST00000540060 NUTM2GQ5VZR2 741 aa9.67□□□□□ -0.86
LPCAT3-209ENST00000540060 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.67□□□□□ -0.86
LPCAT3-209ENST00000540060 SPDYE1Q8NFV5 336 aaPredicted RBP9.67□□□□□ -0.86
LPCAT3-209ENST00000540060 WNK3Q9BYP7 1800 aa9.67□□□□□ -0.86
LPCAT3-209ENST00000540060 CPDO75976 1380 aa9.66□□□□□ -0.86
LPCAT3-209ENST00000540060 ADAMTS2O95450 1211 aa9.66□□□□□ -0.86
LPCAT3-209ENST00000540060 MMRN1Q13201 1228 aa9.66□□□□□ -0.86
LPCAT3-209ENST00000540060 MEX3CQ5U5Q3 659 aaKnown RBP9.66□□□□□ -0.86
LPCAT3-209ENST00000540060 CHADLQ6NUI6 762 aa9.66□□□□□ -0.86
LPCAT3-209ENST00000540060 NLRP13Q86W25 1043 aa9.66□□□□□ -0.86
LPCAT3-209ENST00000540060 NME9Q86XW9 330 aa9.66□□□□□ -0.86
LPCAT3-209ENST00000540060 CARD14Q9BXL6 1004 aa9.66□□□□□ -0.86
LPCAT3-209ENST00000540060 FAM208AQ9UK61 1670 aaKnown RBP9.66□□□□□ -0.86
LPCAT3-209ENST00000540060 MAP2P11137 1827 aaKnown RBP9.66□□□□□ -0.86
LPCAT3-209ENST00000540060 PEAK1Q9H792 1746 aa9.65□□□□□ -0.86
LPCAT3-209ENST00000540060 PLEKHG5O94827 1062 aa9.65□□□□□ -0.86
LPCAT3-209ENST00000540060 HAP1P54257 671 aaPredicted RBP9.65□□□□□ -0.86
LPCAT3-209ENST00000540060 NLRP6P59044 892 aa9.65□□□□□ -0.86
LPCAT3-209ENST00000540060 ILDR2Q71H61 639 aa9.65□□□□□ -0.86
LPCAT3-209ENST00000540060 C8orf37Q96NL8 207 aa9.65□□□□□ -0.86
LPCAT3-209ENST00000540060 BCL9LQ86UU0 1499 aa9.65□□□□□ -0.87
LPCAT3-209ENST00000540060 KIAA0232Q92628 1395 aa9.64□□□□□ -0.87
LPCAT3-209ENST00000540060 AFF2P51816 1311 aa9.64□□□□□ -0.87
LPCAT3-209ENST00000540060 ZRANB1Q9UGI0 708 aa9.64□□□□□ -0.87
LPCAT3-209ENST00000540060 CAMTA1Q9Y6Y1 1673 aa9.64□□□□□ -0.87
LPCAT3-209ENST00000540060 GLI3P10071 1580 aa9.63□□□□□ -0.87
LPCAT3-209ENST00000540060 GCP02774 474 aa9.63□□□□□ -0.87
LPCAT3-209ENST00000540060 PANK3Q9H999 370 aa9.63□□□□□ -0.87
LPCAT3-209ENST00000540060 RGS17Q9UGC6 210 aaPredicted RBP9.63□□□□□ -0.87
LPCAT3-209ENST00000540060 NSD2O96028 1365 aa9.63□□□□□ -0.87
LPCAT3-209ENST00000540060 CGNL1Q0VF96 1302 aa9.62□□□□□ -0.87
LPCAT3-209ENST00000540060 COL5A2P05997 1499 aaPredicted RBP9.62□□□□□ -0.87
LPCAT3-209ENST00000540060 FYB1O15117 783 aa9.62□□□□□ -0.87
LPCAT3-209ENST00000540060 FNBP4Q8N3X1 1017 aaPredicted RBP9.62□□□□□ -0.87
LPCAT3-209ENST00000540060 ATRNO75882 1429 aa9.62□□□□□ -0.87
LPCAT3-209ENST00000540060 RGPD2P0DJD1 1756 aa9.62□□□□□ -0.87
LPCAT3-209ENST00000540060 FAM83GA6ND36 823 aa9.61□□□□□ -0.87
LPCAT3-209ENST00000540060 ZC3H6P61129 1189 aaKnown RBP9.61□□□□□ -0.87
LPCAT3-209ENST00000540060 KCNH5Q8NCM2 988 aa9.61□□□□□ -0.87
LPCAT3-209ENST00000540060 NGLY1Q96IV0 654 aa9.61□□□□□ -0.87
LPCAT3-209ENST00000540060 GGNBP2Q9H3C7 697 aa9.61□□□□□ -0.87
LPCAT3-209ENST00000540060 PRDM11Q9NQV5 511 aa9.61□□□□□ -0.87
LPCAT3-209ENST00000540060 AATKQ6ZMQ8 1374 aa9.61□□□□□ -0.87
LPCAT3-209ENST00000540060 THSD7AQ9UPZ6 1657 aa9.61□□□□□ -0.87
LPCAT3-209ENST00000540060 ZNF772Q68DY9 489 aaPredicted RBP9.6□□□□□ -0.87
LPCAT3-209ENST00000540060 COG3Q96JB2 828 aa9.6□□□□□ -0.87
LPCAT3-209ENST00000540060 BRWD3Q6RI45 1802 aa9.6□□□□□ -0.87
LPCAT3-209ENST00000540060 SMG6Q86US8 1419 aaKnown RBP9.59□□□□□ -0.87
LPCAT3-209ENST00000540060 SOX12O15370 315 aa9.59□□□□□ -0.87
LPCAT3-209ENST00000540060 PER1O15534 1290 aaPredicted RBP9.59□□□□□ -0.87
LPCAT3-209ENST00000540060 CHRNA2Q15822 529 aa9.59□□□□□ -0.87
LPCAT3-209ENST00000540060 ARHGEF25Q86VW2 580 aa9.59□□□□□ -0.87
LPCAT3-209ENST00000540060 USP21Q9UK80 565 aa9.59□□□□□ -0.87
LPCAT3-209ENST00000540060 RTL1A6NKG5 1358 aa9.59□□□□□ -0.87
LPCAT3-209ENST00000540060 PARP4Q9UKK3 1724 aaKnown RBP9.59□□□□□ -0.87
LPCAT3-209ENST00000540060 CDK12Q9NYV4 1490 aaPredicted RBP9.59□□□□□ -0.87
LPCAT3-209ENST00000540060 BLMP54132 1417 aaPredicted RBP9.58□□□□□ -0.88
LPCAT3-209ENST00000540060 AMER1Q5JTC6 1135 aaPredicted RBP9.58□□□□□ -0.88
LPCAT3-209ENST00000540060 POTEAQ6S8J7 498 aa9.58□□□□□ -0.88
LPCAT3-209ENST00000540060 UNC5CLQ8IV45 518 aa9.58□□□□□ -0.88
LPCAT3-209ENST00000540060 BTG4Q9NY30 223 aa9.58□□□□□ -0.88
LPCAT3-209ENST00000540060 KNSTRNQ9Y448 316 aa9.58□□□□□ -0.88
LPCAT3-209ENST00000540060 NPC1L1Q9UHC9 1359 aa9.58□□□□□ -0.88
LPCAT3-209ENST00000540060 RGS12O14924 1447 aa9.57□□□□□ -0.88
LPCAT3-209ENST00000540060 LRRC37A3O60309 1634 aa9.57□□□□□ -0.88
LPCAT3-209ENST00000540060 MAMSTRQ6ZN01 415 aa9.57□□□□□ -0.88
LPCAT3-209ENST00000540060 KIF24Q5T7B8 1368 aa9.57□□□□□ -0.88
LPCAT3-209ENST00000540060 MAP3K19Q56UN5 1328 aa9.56□□□□□ -0.88
LPCAT3-209ENST00000540060 ZBTB7CA1YPR0 619 aa9.56□□□□□ -0.88
LPCAT3-209ENST00000540060 TRPC5Q9UL62 973 aaPredicted RBP9.56□□□□□ -0.88
LPCAT3-209ENST00000540060 RGPD1P0DJD0 1748 aa9.56□□□□□ -0.88
LPCAT3-209ENST00000540060 CRB1P82279 1406 aa9.56□□□□□ -0.88
LPCAT3-209ENST00000540060 FLT4P35916 1363 aa9.55□□□□□ -0.88
LPCAT3-209ENST00000540060 FBLN1P23142 703 aa9.55□□□□□ -0.88
LPCAT3-209ENST00000540060 RRS1Q15050 365 aaKnown RBP9.55□□□□□ -0.88
LPCAT3-209ENST00000540060 VPS72Q15906 364 aa9.55□□□□□ -0.88
LPCAT3-209ENST00000540060 QTRT2Q9H974 415 aaKnown RBP9.55□□□□□ -0.88
LPCAT3-209ENST00000540060 AXIN2Q9Y2T1 843 aa9.55□□□□□ -0.88
LPCAT3-209ENST00000540060 SHANK3Q9BYB0 1731 aa9.55□□□□□ -0.88
LPCAT3-209ENST00000540060 ERBB3P21860 1342 aa9.55□□□□□ -0.88
LPCAT3-209ENST00000540060 SPATA31A5Q5VU36 1347 aa9.54□□□□□ -0.88
LPCAT3-209ENST00000540060 SPATA31A7Q8IWB4 1347 aa9.54□□□□□ -0.88
LPCAT3-209ENST00000540060 WDR17Q8IZU2 1322 aa9.54□□□□□ -0.88
LPCAT3-209ENST00000540060 SOCS7O14512 581 aa9.53□□□□□ -0.88
LPCAT3-209ENST00000540060 HOXC9P31274 260 aa9.53□□□□□ -0.88
LPCAT3-209ENST00000540060 RBM6P78332 1123 aaKnown RBP9.53□□□□□ -0.88
LPCAT3-209ENST00000540060 SPNS2Q8IVW8 549 aa9.53□□□□□ -0.88
LPCAT3-209ENST00000540060 IP6K1Q92551 441 aa9.53□□□□□ -0.88
LPCAT3-209ENST00000540060 GJD4Q96KN9 370 aaPredicted RBP9.53□□□□□ -0.88
LPCAT3-209ENST00000540060 STRN4Q9NRL3 753 aa9.53□□□□□ -0.88
LPCAT3-209ENST00000540060 EMILIN1Q9Y6C2 1016 aa9.53□□□□□ -0.88
LPCAT3-209ENST00000540060 SPATA31A1Q5TZJ5 1347 aa9.53□□□□□ -0.88
LPCAT3-209ENST00000540060 EP400Q96L91 3159 aa9.53□□□□□ -0.88
LPCAT3-209ENST00000540060 INSRP06213 1382 aa9.52□□□□□ -0.88
LPCAT3-209ENST00000540060 ZNF316A6NFI3 1004 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms