RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 RPGRIP1LQ68CZ1 1315 aa17.27■□□□□ 0.35
SCNN1A-215ENST00000540037 CCDC173Q0VFZ6 552 aa17.26■□□□□ 0.35
SCNN1A-215ENST00000540037 KLHL40Q2TBA0 621 aa17.26■□□□□ 0.35
SCNN1A-215ENST00000540037 CD163L1Q9NR16 1453 aa17.26■□□□□ 0.35
SCNN1A-215ENST00000540037 CDC45O75419 566 aa17.26■□□□□ 0.35
SCNN1A-215ENST00000540037 PPP1R9BQ96SB3 815 aa17.26■□□□□ 0.35
SCNN1A-215ENST00000540037 CABP1Q9NZU7 370 aa17.26■□□□□ 0.35
SCNN1A-215ENST00000540037 APBB1O00213 710 aa17.26■□□□□ 0.35
SCNN1A-215ENST00000540037 PLEKHM2Q8IWE5 1019 aa17.26■□□□□ 0.35
SCNN1A-215ENST00000540037 MBIPQ9NS73 344 aa17.26■□□□□ 0.35
SCNN1A-215ENST00000540037 GOLGA6L22H0YM25 854 aa17.25■□□□□ 0.35
SCNN1A-215ENST00000540037 FCHSD2O94868 740 aa17.25■□□□□ 0.35
SCNN1A-215ENST00000540037 TERF2IPQ9NYB0 399 aa17.25■□□□□ 0.35
SCNN1A-215ENST00000540037 C8orf58Q8NAV2 365 aa17.25■□□□□ 0.35
SCNN1A-215ENST00000540037 FAM83GA6ND36 823 aa17.24■□□□□ 0.35
SCNN1A-215ENST00000540037 IDI1Q13907 227 aa17.24■□□□□ 0.35
SCNN1A-215ENST00000540037 ZGPATQ8N5A5 531 aaKnown RBP17.24■□□□□ 0.35
SCNN1A-215ENST00000540037 RBM27Q9P2N5 1060 aaKnown RBP17.24■□□□□ 0.35
SCNN1A-215ENST00000540037 POLKQ9UBT6 870 aa17.24■□□□□ 0.35
SCNN1A-215ENST00000540037 ZSCAN30Q86W11 494 aa17.23■□□□□ 0.35
SCNN1A-215ENST00000540037 PNPLA6Q8IY17 1366 aa17.23■□□□□ 0.35
SCNN1A-215ENST00000540037 SIGLEC1Q9BZZ2 1709 aa17.23■□□□□ 0.35
SCNN1A-215ENST00000540037 DCTN1Q14203 1278 aa17.23■□□□□ 0.35
SCNN1A-215ENST00000540037 RBSNQ9H1K0 784 aa17.23■□□□□ 0.35
SCNN1A-215ENST00000540037 RBM10P98175 930 aaKnown RBP17.23■□□□□ 0.35
SCNN1A-215ENST00000540037 ZSCAN23Q3MJ62 389 aa17.23■□□□□ 0.35
SCNN1A-215ENST00000540037 FOXD4L5Q5VV16 416 aaPredicted RBP17.22■□□□□ 0.35
SCNN1A-215ENST00000540037 FOXD4L4Q8WXT5 416 aaPredicted RBP17.22■□□□□ 0.35
SCNN1A-215ENST00000540037 LMBRD1Q9NUN5 540 aa17.22■□□□□ 0.35
SCNN1A-215ENST00000540037 EMILIN1Q9Y6C2 1016 aa17.22■□□□□ 0.35
SCNN1A-215ENST00000540037 NEXMIFQ5QGS0 1516 aa17.22■□□□□ 0.35
SCNN1A-215ENST00000540037 ABCC4O15439 1325 aa17.22■□□□□ 0.35
SCNN1A-215ENST00000540037 FRMPD1Q5SYB0 1578 aa17.22■□□□□ 0.35
SCNN1A-215ENST00000540037 SMARCA5O60264 1052 aaPredicted RBP17.22■□□□□ 0.35
SCNN1A-215ENST00000540037 BRPF1P55201 1214 aaPredicted RBP17.22■□□□□ 0.35
SCNN1A-215ENST00000540037 TWISTNBQ3B726 338 aaPredicted RBP17.22■□□□□ 0.35
SCNN1A-215ENST00000540037 NFE2L2Q16236 605 aa17.21■□□□□ 0.35
SCNN1A-215ENST00000540037 CLEC17AQ6ZS10 378 aa17.21■□□□□ 0.35
SCNN1A-215ENST00000540037 PTCH1Q13635 1447 aa17.21■□□□□ 0.35
SCNN1A-215ENST00000540037 FAM135BQ49AJ0 1406 aa17.21■□□□□ 0.35
SCNN1A-215ENST00000540037 PRIM1P49642 420 aaKnown RBP17.21■□□□□ 0.35
SCNN1A-215ENST00000540037 CDK19Q9BWU1 502 aa17.21■□□□□ 0.35
SCNN1A-215ENST00000540037 USP26Q9BXU7 913 aa17.21■□□□□ 0.35
SCNN1A-215ENST00000540037 PRPF40AO75400 957 aaKnown RBP17.21■□□□□ 0.34
SCNN1A-215ENST00000540037 PTMSP20962 102 aa17.21■□□□□ 0.34
SCNN1A-215ENST00000540037 KRT24Q2M2I5 525 aa17.2■□□□□ 0.34
SCNN1A-215ENST00000540037 ANP32BQ92688 251 aaKnown RBP17.2■□□□□ 0.34
SCNN1A-215ENST00000540037 PIK3R4Q99570 1358 aa17.2■□□□□ 0.34
SCNN1A-215ENST00000540037 ASXL2Q76L83 1435 aa17.2■□□□□ 0.34
SCNN1A-215ENST00000540037 MSNP26038 577 aaKnown RBP17.2■□□□□ 0.34
SCNN1A-215ENST00000540037 CALD1Q05682 793 aaKnown RBP17.2■□□□□ 0.34
SCNN1A-215ENST00000540037 ARHGAP45Q92619 1136 aa17.2■□□□□ 0.34
SCNN1A-215ENST00000540037 TTC22Q5TAA0 569 aa17.19■□□□□ 0.34
SCNN1A-215ENST00000540037 HDGFL2Q7Z4V5 671 aaPredicted RBP17.19■□□□□ 0.34
SCNN1A-215ENST00000540037 GPT2Q8TD30 523 aa17.19■□□□□ 0.34
SCNN1A-215ENST00000540037 ZRANB1Q9UGI0 708 aa17.19■□□□□ 0.34
SCNN1A-215ENST00000540037 NSFL1CQ9UNZ2 370 aaKnown RBP17.19■□□□□ 0.34
SCNN1A-215ENST00000540037 TPM2P07951 284 aa17.19■□□□□ 0.34
SCNN1A-215ENST00000540037 ZDHHC9Q9Y397 364 aa17.19■□□□□ 0.34
SCNN1A-215ENST00000540037 KNDC1Q76NI1 1749 aa17.19■□□□□ 0.34
SCNN1A-215ENST00000540037 ABCC3O15438 1527 aa17.19■□□□□ 0.34
SCNN1A-215ENST00000540037 CYP2E1P05181 493 aaPredicted RBP17.18■□□□□ 0.34
SCNN1A-215ENST00000540037 RABEP1Q15276 862 aa17.18■□□□□ 0.34
SCNN1A-215ENST00000540037 OFD1O75665 1012 aa17.18■□□□□ 0.34
SCNN1A-215ENST00000540037 XPCQ01831 940 aaPredicted RBP17.18■□□□□ 0.34
SCNN1A-215ENST00000540037 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.18■□□□□ 0.34
SCNN1A-215ENST00000540037 ZNF445P59923 1031 aa17.18■□□□□ 0.34
SCNN1A-215ENST00000540037 R3HCC1Q9Y3T6 440 aaKnown RBP17.18■□□□□ 0.34
SCNN1A-215ENST00000540037 PTPRMP28827 1452 aa17.17■□□□□ 0.34
SCNN1A-215ENST00000540037 SDSP20132 328 aa17.17■□□□□ 0.34
SCNN1A-215ENST00000540037 GNAI1P63096 354 aa17.17■□□□□ 0.34
SCNN1A-215ENST00000540037 ZNF428Q96B54 188 aa17.17■□□□□ 0.34
SCNN1A-215ENST00000540037 RAPGEF3O95398 923 aa17.17■□□□□ 0.34
SCNN1A-215ENST00000540037 ZNF853P0CG23 659 aa17.16■□□□□ 0.34
SCNN1A-215ENST00000540037 DCTPP1Q9H773 170 aa17.16■□□□□ 0.34
SCNN1A-215ENST00000540037 IBTKQ9P2D0 1353 aaPredicted RBP17.16■□□□□ 0.34
SCNN1A-215ENST00000540037 IFT57Q9NWB7 429 aa17.16■□□□□ 0.34
SCNN1A-215ENST00000540037 HECW2Q9P2P5 1572 aa17.16■□□□□ 0.34
SCNN1A-215ENST00000540037 YTHDC2Q9H6S0 1430 aaKnown RBP17.15■□□□□ 0.34
SCNN1A-215ENST00000540037 NUCB2P80303 420 aa17.15■□□□□ 0.34
SCNN1A-215ENST00000540037 ANKRD26Q9UPS8 1709 aa17.15■□□□□ 0.34
SCNN1A-215ENST00000540037 WAPLQ7Z5K2 1190 aa17.15■□□□□ 0.34
SCNN1A-215ENST00000540037 CHMP4BQ9H444 224 aaKnown RBP17.14■□□□□ 0.33
SCNN1A-215ENST00000540037 TMEM63CQ9P1W3 806 aa17.14■□□□□ 0.33
SCNN1A-215ENST00000540037 SYCE3A1L190 88 aa17.13■□□□□ 0.33
SCNN1A-215ENST00000540037 ZBTB7CA1YPR0 619 aa17.13■□□□□ 0.33
SCNN1A-215ENST00000540037 RRS1Q15050 365 aaKnown RBP17.13■□□□□ 0.33
SCNN1A-215ENST00000540037 ARID3AQ99856 593 aa17.13■□□□□ 0.33
SCNN1A-215ENST00000540037 IL13P35225 146 aa17.13■□□□□ 0.33
SCNN1A-215ENST00000540037 NME9Q86XW9 330 aa17.13■□□□□ 0.33
SCNN1A-215ENST00000540037 RNF214Q8ND24 703 aa17.13■□□□□ 0.33
SCNN1A-215ENST00000540037 INTS3Q68E01 1043 aaKnown RBP17.13■□□□□ 0.33
SCNN1A-215ENST00000540037 CFAP44Q96MT7 982 aa17.13■□□□□ 0.33
SCNN1A-215ENST00000540037 PDCL3Q9H2J4 239 aa17.13■□□□□ 0.33
SCNN1A-215ENST00000540037 FAM13BQ9NYF5 915 aa17.13■□□□□ 0.33
SCNN1A-215ENST00000540037 TSHZ3Q63HK5 1081 aa17.12■□□□□ 0.33
SCNN1A-215ENST00000540037 API5Q9BZZ5 524 aaKnown RBP17.12■□□□□ 0.33
SCNN1A-215ENST00000540037 MYO5BQ9ULV0 1848 aa17.12■□□□□ 0.33
SCNN1A-215ENST00000540037 PIK3C2BO00750 1634 aa17.11■□□□□ 0.33
SCNN1A-215ENST00000540037 ZFYVE9O95405 1425 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms