RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 USP25Q9UHP3 1055 aa7.43□□□□□ -1.22
SNHG1-211ENST00000539921 PAXBP1Q9Y5B6 917 aa7.43□□□□□ -1.22
SNHG1-211ENST00000539921 ANKRD36BQ8N2N9 1353 aa7.43□□□□□ -1.22
SNHG1-211ENST00000539921 ANKRD30BQ9BXX2 1392 aa7.43□□□□□ -1.22
SNHG1-211ENST00000539921 NKTRP30414 1462 aaKnown RBP7.43□□□□□ -1.22
SNHG1-211ENST00000539921 PCF11O94913 1555 aaKnown RBP7.42□□□□□ -1.22
SNHG1-211ENST00000539921 KIF21AQ7Z4S6 1674 aa7.42□□□□□ -1.22
SNHG1-211ENST00000539921 LOC102724159A0A0B4J2E5 919 aa7.42□□□□□ -1.22
SNHG1-211ENST00000539921 GOLIM4O00461 696 aa7.42□□□□□ -1.22
SNHG1-211ENST00000539921 MAFGO15525 162 aa7.42□□□□□ -1.22
SNHG1-211ENST00000539921 ATP8B1O43520 1251 aa7.42□□□□□ -1.22
SNHG1-211ENST00000539921 NCBP1Q09161 790 aaKnown RBP7.42□□□□□ -1.22
SNHG1-211ENST00000539921 GPS2Q13227 327 aa7.42□□□□□ -1.22
SNHG1-211ENST00000539921 PWP2Q15269 919 aaKnown RBP7.42□□□□□ -1.22
SNHG1-211ENST00000539921 C11orf91Q3C1V1 193 aa7.42□□□□□ -1.22
SNHG1-211ENST00000539921 TRMT2AQ8IZ69 625 aaKnown RBP7.42□□□□□ -1.22
SNHG1-211ENST00000539921 JMYQ8N9B5 988 aa7.42□□□□□ -1.22
SNHG1-211ENST00000539921 CLUAP1Q96AJ1 413 aa7.42□□□□□ -1.22
SNHG1-211ENST00000539921 PSMD1Q99460 953 aa7.42□□□□□ -1.22
SNHG1-211ENST00000539921 DEF6Q9H4E7 631 aa7.42□□□□□ -1.22
SNHG1-211ENST00000539921 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.42□□□□□ -1.22
SNHG1-211ENST00000539921 USP47Q96K76 1375 aa7.42□□□□□ -1.22
SNHG1-211ENST00000539921 SNAPC4Q5SXM2 1469 aa7.42□□□□□ -1.22
SNHG1-211ENST00000539921 KLHL33A6NCF5 533 aa7.41□□□□□ -1.22
SNHG1-211ENST00000539921 ATP2B1P20020 1258 aa7.41□□□□□ -1.22
SNHG1-211ENST00000539921 DUSP27Q5VZP5 1158 aa7.41□□□□□ -1.22
SNHG1-211ENST00000539921 RASEFQ8IZ41 740 aa7.41□□□□□ -1.22
SNHG1-211ENST00000539921 TBC1D22AQ8WUA7 517 aa7.41□□□□□ -1.22
SNHG1-211ENST00000539921 FAM212AQ96EL1 285 aa7.41□□□□□ -1.22
SNHG1-211ENST00000539921 RBSNQ9H1K0 784 aa7.41□□□□□ -1.22
SNHG1-211ENST00000539921 CWC22Q9HCG8 908 aaKnown RBP7.41□□□□□ -1.22
SNHG1-211ENST00000539921 PSD3Q9NYI0 1048 aa7.41□□□□□ -1.22
SNHG1-211ENST00000539921 ARHGEF11O15085 1522 aa7.41□□□□□ -1.22
SNHG1-211ENST00000539921 HTATSF1O43719 755 aaKnown RBP7.4□□□□□ -1.22
SNHG1-211ENST00000539921 BAG4O95429 457 aaKnown RBP7.4□□□□□ -1.22
SNHG1-211ENST00000539921 SEC24BO95487 1268 aa7.4□□□□□ -1.22
SNHG1-211ENST00000539921 CPP00450 1065 aa7.4□□□□□ -1.22
SNHG1-211ENST00000539921 CYP2E1P05181 493 aaPredicted RBP7.4□□□□□ -1.22
SNHG1-211ENST00000539921 ATP6V1AP38606 617 aa7.4□□□□□ -1.22
SNHG1-211ENST00000539921 TDO2P48775 406 aa7.4□□□□□ -1.22
SNHG1-211ENST00000539921 FAM50AQ14320 339 aaKnown RBP7.4□□□□□ -1.22
SNHG1-211ENST00000539921 SETDB1Q15047 1291 aa7.4□□□□□ -1.22
SNHG1-211ENST00000539921 CC2D2BQ6DHV5 1058 aa7.4□□□□□ -1.22
SNHG1-211ENST00000539921 HS6ST3Q8IZP7 471 aa7.4□□□□□ -1.22
SNHG1-211ENST00000539921 KIAA1524Q8TCG1 905 aa7.4□□□□□ -1.22
SNHG1-211ENST00000539921 L3MBTL2Q969R5 705 aa7.4□□□□□ -1.22
SNHG1-211ENST00000539921 ITFG2Q969R8 447 aa7.4□□□□□ -1.22
SNHG1-211ENST00000539921 ATG3Q9NT62 314 aa7.4□□□□□ -1.22
SNHG1-211ENST00000539921 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.4□□□□□ -1.22
SNHG1-211ENST00000539921 JRKLQ9Y4A0 524 aa7.4□□□□□ -1.22
SNHG1-211ENST00000539921 ROCK1Q13464 1354 aa7.4□□□□□ -1.22
SNHG1-211ENST00000539921 LAMC1P11047 1609 aa7.39□□□□□ -1.23
SNHG1-211ENST00000539921 EHBP1L1Q8N3D4 1523 aa7.39□□□□□ -1.23
SNHG1-211ENST00000539921 K7ELQ4 463 aaPredicted RBP7.39□□□□□ -1.23
SNHG1-211ENST00000539921 ERCC3P19447 782 aa7.39□□□□□ -1.23
SNHG1-211ENST00000539921 HNRNPH2P55795 449 aaKnown RBP7.39□□□□□ -1.23
SNHG1-211ENST00000539921 TPM4P67936 248 aa7.39□□□□□ -1.23
SNHG1-211ENST00000539921 BMS1Q14692 1282 aaKnown RBP7.39□□□□□ -1.23
SNHG1-211ENST00000539921 C20orf194Q5TEA3 1177 aa7.39□□□□□ -1.23
SNHG1-211ENST00000539921 MKL1Q969V6 931 aa7.39□□□□□ -1.23
SNHG1-211ENST00000539921 NOL10Q9BSC4 688 aaKnown RBP7.39□□□□□ -1.23
SNHG1-211ENST00000539921 CXorf56Q9H5V9 222 aa7.39□□□□□ -1.23
SNHG1-211ENST00000539921 KDM5DQ9BY66 1539 aa7.38□□□□□ -1.23
SNHG1-211ENST00000539921 GRIN2AQ12879 1464 aa7.38□□□□□ -1.23
SNHG1-211ENST00000539921 PLB1Q6P1J6 1458 aa7.38□□□□□ -1.23
SNHG1-211ENST00000539921 FGD5Q6ZNL6 1462 aa7.38□□□□□ -1.23
SNHG1-211ENST00000539921 ATAD2BQ9ULI0 1458 aa7.38□□□□□ -1.23
SNHG1-211ENST00000539921 PLEKHG2Q9H7P9 1386 aa7.38□□□□□ -1.23
SNHG1-211ENST00000539921 CCDC189A1A4V9 331 aa7.38□□□□□ -1.23
SNHG1-211ENST00000539921 MYO1CO00159 1063 aa7.38□□□□□ -1.23
SNHG1-211ENST00000539921 RIOK3O14730 519 aaKnown RBP7.38□□□□□ -1.23
SNHG1-211ENST00000539921 IVLP07476 585 aa7.38□□□□□ -1.23
SNHG1-211ENST00000539921 MAGEA9P43362 315 aa7.38□□□□□ -1.23
SNHG1-211ENST00000539921 MCTP2Q6DN12 878 aa7.38□□□□□ -1.23
SNHG1-211ENST00000539921 NUTM1Q86Y26 1132 aa7.38□□□□□ -1.23
SNHG1-211ENST00000539921 STAG1Q8WVM7 1258 aa7.38□□□□□ -1.23
SNHG1-211ENST00000539921 UTP14AQ9BVJ6 771 aaKnown RBP7.38□□□□□ -1.23
SNHG1-211ENST00000539921 LMBRD1Q9NUN5 540 aa7.38□□□□□ -1.23
SNHG1-211ENST00000539921 SH3BP1Q9Y3L3 701 aa7.38□□□□□ -1.23
SNHG1-211ENST00000539921 PTPRKQ15262 1439 aa7.37□□□□□ -1.23
SNHG1-211ENST00000539921 KIF2AO00139 706 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-211ENST00000539921 CTAGE5O15320 804 aa7.37□□□□□ -1.23
SNHG1-211ENST00000539921 SGSM2O43147 1006 aa7.37□□□□□ -1.23
SNHG1-211ENST00000539921 C21orf2O43822 256 aa7.37□□□□□ -1.23
SNHG1-211ENST00000539921 NRDCO43847 1150 aa7.37□□□□□ -1.23
SNHG1-211ENST00000539921 PLIN1O60240 522 aa7.37□□□□□ -1.23
SNHG1-211ENST00000539921 RPS6KA5O75582 802 aa7.37□□□□□ -1.23
SNHG1-211ENST00000539921 TUBB4AP04350 444 aa7.37□□□□□ -1.23
SNHG1-211ENST00000539921 USP8P40818 1118 aa7.37□□□□□ -1.23
SNHG1-211ENST00000539921 PRIM1P49642 420 aaKnown RBP7.37□□□□□ -1.23
SNHG1-211ENST00000539921 GOLGA2Q08379 1002 aa7.37□□□□□ -1.23
SNHG1-211ENST00000539921 TTC31Q49AM3 519 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-211ENST00000539921 TMED8Q6PL24 325 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-211ENST00000539921 CERS3Q8IU89 383 aa7.37□□□□□ -1.23
SNHG1-211ENST00000539921 GOLGA5Q8TBA6 731 aa7.37□□□□□ -1.23
SNHG1-211ENST00000539921 PPM1EQ8WY54 764 aa7.37□□□□□ -1.23
SNHG1-211ENST00000539921 FAM107BQ9H098 131 aa7.37□□□□□ -1.23
SNHG1-211ENST00000539921 RWDD1Q9H446 243 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-211ENST00000539921 TSPY26PQ9H489 355 aa7.37□□□□□ -1.23
SNHG1-211ENST00000539921 A1CFQ9NQ94 594 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms