RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 RIPK4P57078 832 aa13.14□□□□□ -0.31
SPARC-209ENST00000539687 CRBNQ96SW2 442 aa13.14□□□□□ -0.31
SPARC-209ENST00000539687 RRP7AQ9Y3A4 280 aaKnown RBP13.14□□□□□ -0.31
SPARC-209ENST00000539687 PRKAR2BP31323 418 aa13.13□□□□□ -0.31
SPARC-209ENST00000539687 NFE2L2Q16236 605 aa13.13□□□□□ -0.31
SPARC-209ENST00000539687 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
SPARC-209ENST00000539687 EMILIN1Q9Y6C2 1016 aa13.13□□□□□ -0.31
SPARC-209ENST00000539687 NCKAP5LQ9HCH0 1330 aa13.13□□□□□ -0.31
SPARC-209ENST00000539687 SBNO1A3KN83 1393 aa13.12□□□□□ -0.31
SPARC-209ENST00000539687 FLT4P35916 1363 aa13.12□□□□□ -0.31
SPARC-209ENST00000539687 HAP1P54257 671 aaPredicted RBP13.12□□□□□ -0.31
SPARC-209ENST00000539687 MED1Q15648 1581 aaPredicted RBP13.11□□□□□ -0.31
SPARC-209ENST00000539687 ARHGEF10O15013 1369 aa13.11□□□□□ -0.31
SPARC-209ENST00000539687 PLIN1O60240 522 aa13.11□□□□□ -0.31
SPARC-209ENST00000539687 RARSP54136 660 aaKnown RBP13.11□□□□□ -0.31
SPARC-209ENST00000539687 CENPQQ7L2Z9 268 aaPredicted RBP13.11□□□□□ -0.31
SPARC-209ENST00000539687 TRIM35Q9UPQ4 493 aa13.11□□□□□ -0.31
SPARC-209ENST00000539687 ZNF335Q9H4Z2 1342 aaPredicted RBP13.11□□□□□ -0.31
SPARC-209ENST00000539687 FANCIQ9NVI1 1328 aa13.11□□□□□ -0.31
SPARC-209ENST00000539687 TCERG1O14776 1098 aaKnown RBP13.1□□□□□ -0.31
SPARC-209ENST00000539687 PHF8Q9UPP1 1060 aa13.1□□□□□ -0.31
SPARC-209ENST00000539687 NCOA3Q9Y6Q9 1424 aa13.1□□□□□ -0.31
SPARC-209ENST00000539687 RTL1A6NKG5 1358 aa13.09□□□□□ -0.31
SPARC-209ENST00000539687 NUTM2FA1L443 756 aa13.09□□□□□ -0.31
SPARC-209ENST00000539687 GNAI1P63096 354 aa13.09□□□□□ -0.31
SPARC-209ENST00000539687 PMFBP1Q8TBY8 1022 aa13.09□□□□□ -0.31
SPARC-209ENST00000539687 ZRANB1Q9UGI0 708 aa13.09□□□□□ -0.31
SPARC-209ENST00000539687 RRS1Q15050 365 aaKnown RBP13.08□□□□□ -0.32
SPARC-209ENST00000539687 ALDH1L2Q3SY69 923 aa13.08□□□□□ -0.32
SPARC-209ENST00000539687 IFT57Q9NWB7 429 aa13.08□□□□□ -0.32
SPARC-209ENST00000539687 PIK3C2AO00443 1686 aa13.08□□□□□ -0.32
SPARC-209ENST00000539687 KIF16BQ96L93 1317 aa13.08□□□□□ -0.32
SPARC-209ENST00000539687 IPO8O15397 1037 aaKnown RBP13.07□□□□□ -0.32
SPARC-209ENST00000539687 BCAR3O75815 825 aa13.07□□□□□ -0.32
SPARC-209ENST00000539687 EIF4A2Q14240 407 aaKnown RBP13.07□□□□□ -0.32
SPARC-209ENST00000539687 ZKSCAN2Q63HK3 967 aa13.07□□□□□ -0.32
SPARC-209ENST00000539687 CHMP4BQ9H444 224 aaKnown RBP13.07□□□□□ -0.32
SPARC-209ENST00000539687 RBM19Q9Y4C8 960 aaKnown RBP13.07□□□□□ -0.32
SPARC-209ENST00000539687 KIF1AQ12756 1690 aa13.07□□□□□ -0.32
SPARC-209ENST00000539687 RGPD1P0DJD0 1748 aa13.06□□□□□ -0.32
SPARC-209ENST00000539687 HMOX1P09601 288 aa13.06□□□□□ -0.32
SPARC-209ENST00000539687 C14orf37Q86TY3 774 aa13.06□□□□□ -0.32
SPARC-209ENST00000539687 KCNH5Q8NCM2 988 aa13.06□□□□□ -0.32
SPARC-209ENST00000539687 RGPD8O14715 1765 aaPredicted RBP13.06□□□□□ -0.32
SPARC-209ENST00000539687 DCCP43146 1447 aa13.05□□□□□ -0.32
SPARC-209ENST00000539687 AMPHP49418 695 aa13.05□□□□□ -0.32
SPARC-209ENST00000539687 NLRP6P59044 892 aa13.05□□□□□ -0.32
SPARC-209ENST00000539687 MAP3K19Q56UN5 1328 aa13.05□□□□□ -0.32
SPARC-209ENST00000539687 BRPF1P55201 1214 aaPredicted RBP13.04□□□□□ -0.32
SPARC-209ENST00000539687 EXOSC9Q06265 439 aaKnown RBP13.04□□□□□ -0.32
SPARC-209ENST00000539687 C20orf194Q5TEA3 1177 aa13.04□□□□□ -0.32
SPARC-209ENST00000539687 ABTB2Q8N961 1025 aa13.04□□□□□ -0.32
SPARC-209ENST00000539687 KDRP35968 1356 aa13.04□□□□□ -0.32
SPARC-209ENST00000539687 PEAK1Q9H792 1746 aa13.03□□□□□ -0.32
SPARC-209ENST00000539687 ZBTB22O15209 634 aa13.03□□□□□ -0.32
SPARC-209ENST00000539687 HSPA1LP34931 641 aa13.03□□□□□ -0.32
SPARC-209ENST00000539687 SULT6B1Q6IMI4 303 aa13.03□□□□□ -0.32
SPARC-209ENST00000539687 FTSJ3Q8IY81 847 aaKnown RBP13.03□□□□□ -0.32
SPARC-209ENST00000539687 GAS2L2Q8NHY3 880 aa13.03□□□□□ -0.32
SPARC-209ENST00000539687 FRAT1Q92837 279 aaPredicted RBP13.03□□□□□ -0.32
SPARC-209ENST00000539687 CFAP44Q96MT7 982 aa13.03□□□□□ -0.32
SPARC-209ENST00000539687 SMC4Q9NTJ3 1288 aa13.03□□□□□ -0.32
SPARC-209ENST00000539687 KDM2BQ8NHM5 1336 aa13.03□□□□□ -0.32
SPARC-209ENST00000539687 HTATSF1O43719 755 aaKnown RBP13.02□□□□□ -0.33
SPARC-209ENST00000539687 FBLN1P23142 703 aa13.02□□□□□ -0.33
SPARC-209ENST00000539687 PSME1Q06323 249 aa13.02□□□□□ -0.33
SPARC-209ENST00000539687 CLUAP1Q96AJ1 413 aa13.02□□□□□ -0.33
SPARC-209ENST00000539687 C19orf44Q9H6X5 657 aa13.02□□□□□ -0.33
SPARC-209ENST00000539687 IGSF1Q8N6C5 1336 aa13.02□□□□□ -0.33
SPARC-209ENST00000539687 ZNF853P0CG23 659 aa13.01□□□□□ -0.33
SPARC-209ENST00000539687 PIP4K2BP78356 416 aa13.01□□□□□ -0.33
SPARC-209ENST00000539687 HSP90AB2PQ58FF8 381 aa13.01□□□□□ -0.33
SPARC-209ENST00000539687 ESCO1Q5FWF5 840 aa13.01□□□□□ -0.33
SPARC-209ENST00000539687 PROSER2Q86WR7 435 aaPredicted RBP13.01□□□□□ -0.33
SPARC-209ENST00000539687 DZIP1LQ8IYY4 767 aaKnown RBP13.01□□□□□ -0.33
SPARC-209ENST00000539687 TSR2Q969E8 191 aaKnown RBP13.01□□□□□ -0.33
SPARC-209ENST00000539687 PHACTR3Q96KR7 559 aa13.01□□□□□ -0.33
SPARC-209ENST00000539687 PHRF1Q9P1Y6 1649 aaKnown RBP13.01□□□□□ -0.33
SPARC-209ENST00000539687 MST1RQ04912 1400 aa13□□□□□ -0.33
SPARC-209ENST00000539687 PAK3O75914 559 aaPredicted RBP13□□□□□ -0.33
SPARC-209ENST00000539687 MVPQ14764 893 aaKnown RBP13□□□□□ -0.33
SPARC-209ENST00000539687 ARHGAP45Q92619 1136 aa13□□□□□ -0.33
SPARC-209ENST00000539687 DDX19BQ9UMR2 479 aa13□□□□□ -0.33
SPARC-209ENST00000539687 HOXC9P31274 260 aa12.99□□□□□ -0.33
SPARC-209ENST00000539687 ATF7IPQ6VMQ6 1270 aa12.99□□□□□ -0.33
SPARC-209ENST00000539687 FOXD4L1Q9NU39 408 aa12.99□□□□□ -0.33
SPARC-209ENST00000539687 MARF1Q9Y4F3 1742 aaKnown RBP12.99□□□□□ -0.33
SPARC-209ENST00000539687 KIAA0232Q92628 1395 aa12.98□□□□□ -0.33
SPARC-209ENST00000539687 RTF1Q92541 710 aaKnown RBP12.98□□□□□ -0.33
SPARC-209ENST00000539687 SOS1Q07889 1333 aaPredicted RBP12.97□□□□□ -0.33
SPARC-209ENST00000539687 TOM1O60784 492 aa12.97□□□□□ -0.33
SPARC-209ENST00000539687 ATF3P18847 181 aa12.97□□□□□ -0.33
SPARC-209ENST00000539687 SSH1Q8WYL5 1049 aa12.97□□□□□ -0.33
SPARC-209ENST00000539687 RWDD1Q9H446 243 aaPredicted RBP12.97□□□□□ -0.33
SPARC-209ENST00000539687 BABAM1Q9NWV8 329 aa12.97□□□□□ -0.33
SPARC-209ENST00000539687 COG6Q9Y2V7 657 aa12.97□□□□□ -0.33
SPARC-209ENST00000539687 LAS1LQ9Y4W2 734 aaKnown RBP12.97□□□□□ -0.33
SPARC-209ENST00000539687 SLIT3O75094 1523 aa12.97□□□□□ -0.33
SPARC-209ENST00000539687 NFAT5O94916 1531 aa12.97□□□□□ -0.33
SPARC-209ENST00000539687 C1orf167Q5SNV9 1468 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms