RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 RAB3GAP1Q15042 981 aa16.53■□□□□ 0.24
UBE3B-209ENST00000539584 SPRYD3Q8NCJ5 442 aa16.53■□□□□ 0.24
UBE3B-209ENST00000539584 API5Q9BZZ5 524 aaKnown RBP16.53■□□□□ 0.24
UBE3B-209ENST00000539584 POLKQ9UBT6 870 aa16.53■□□□□ 0.24
UBE3B-209ENST00000539584 PPP6R1Q9UPN7 881 aa16.53■□□□□ 0.24
UBE3B-209ENST00000539584 ZNF853P0CG23 659 aa16.53■□□□□ 0.24
UBE3B-209ENST00000539584 CLCN1P35523 988 aa16.53■□□□□ 0.24
UBE3B-209ENST00000539584 CABP1Q9NZU7 370 aa16.53■□□□□ 0.24
UBE3B-209ENST00000539584 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.53■□□□□ 0.24
UBE3B-209ENST00000539584 RAPGEF3O95398 923 aa16.52■□□□□ 0.24
UBE3B-209ENST00000539584 ANKRD45Q5TZF3 282 aa16.52■□□□□ 0.24
UBE3B-209ENST00000539584 RICTORQ6R327 1708 aa16.52■□□□□ 0.24
UBE3B-209ENST00000539584 CLEC17AQ6ZS10 378 aa16.52■□□□□ 0.23
UBE3B-209ENST00000539584 CDK12Q9NYV4 1490 aaPredicted RBP16.51■□□□□ 0.23
UBE3B-209ENST00000539584 GRPEL1Q9HAV7 217 aa16.51■□□□□ 0.23
UBE3B-209ENST00000539584 RRAGDQ9NQL2 400 aaPredicted RBP16.51■□□□□ 0.23
UBE3B-209ENST00000539584 EDC4Q6P2E9 1401 aaKnown RBP16.51■□□□□ 0.23
UBE3B-209ENST00000539584 K7ELQ4 463 aaPredicted RBP16.5■□□□□ 0.23
UBE3B-209ENST00000539584 TNPO1Q92973 898 aaKnown RBP16.5■□□□□ 0.23
UBE3B-209ENST00000539584 GOLGA6L22H0YM25 854 aa16.49■□□□□ 0.23
UBE3B-209ENST00000539584 CDC45O75419 566 aa16.49■□□□□ 0.23
UBE3B-209ENST00000539584 KIF2CQ99661 725 aa16.49■□□□□ 0.23
UBE3B-209ENST00000539584 YEATS2Q9ULM3 1422 aa16.49■□□□□ 0.23
UBE3B-209ENST00000539584 OSCARQ8IYS5 282 aa16.48■□□□□ 0.23
UBE3B-209ENST00000539584 GZF1Q9H116 711 aaPredicted RBP16.48■□□□□ 0.23
UBE3B-209ENST00000539584 CPSF1Q10570 1443 aaKnown RBP16.48■□□□□ 0.23
UBE3B-209ENST00000539584 MYO5BQ9ULV0 1848 aa16.48■□□□□ 0.23
UBE3B-209ENST00000539584 HSP90AA1P07900 732 aaKnown RBP16.48■□□□□ 0.23
UBE3B-209ENST00000539584 IL13P35225 146 aa16.48■□□□□ 0.23
UBE3B-209ENST00000539584 TBC1D9Q6ZT07 1266 aa16.48■□□□□ 0.23
UBE3B-209ENST00000539584 IBTKQ9P2D0 1353 aaPredicted RBP16.48■□□□□ 0.23
UBE3B-209ENST00000539584 TWISTNBQ3B726 338 aaPredicted RBP16.46■□□□□ 0.23
UBE3B-209ENST00000539584 PRKCSHP14314 528 aaPredicted RBP16.46■□□□□ 0.23
UBE3B-209ENST00000539584 RABEP1Q15276 862 aa16.45■□□□□ 0.22
UBE3B-209ENST00000539584 PHACTR3Q96KR7 559 aa16.45■□□□□ 0.22
UBE3B-209ENST00000539584 MBIPQ9NS73 344 aa16.45■□□□□ 0.22
UBE3B-209ENST00000539584 DCTPP1Q9H773 170 aa16.45■□□□□ 0.22
UBE3B-209ENST00000539584 SIRT2Q8IXJ6 389 aa16.44■□□□□ 0.22
UBE3B-209ENST00000539584 SIRT1Q96EB6 747 aa16.44■□□□□ 0.22
UBE3B-209ENST00000539584 INTS3Q68E01 1043 aaKnown RBP16.43■□□□□ 0.22
UBE3B-209ENST00000539584 RPAP2Q8IXW5 612 aaPredicted RBP16.43■□□□□ 0.22
UBE3B-209ENST00000539584 PANK2Q9BZ23 570 aa16.43■□□□□ 0.22
UBE3B-209ENST00000539584 STAG3Q9UJ98 1225 aa16.43■□□□□ 0.22
UBE3B-209ENST00000539584 RIMS2Q9UQ26 1411 aa16.43■□□□□ 0.22
UBE3B-209ENST00000539584 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.43■□□□□ 0.22
UBE3B-209ENST00000539584 NUCB2P80303 420 aa16.42■□□□□ 0.22
UBE3B-209ENST00000539584 TSPYL6Q8N831 410 aa16.42■□□□□ 0.22
UBE3B-209ENST00000539584 MAP2P11137 1827 aaKnown RBP16.42■□□□□ 0.22
UBE3B-209ENST00000539584 TRIM44Q96DX7 344 aaPredicted RBP16.41■□□□□ 0.22
UBE3B-209ENST00000539584 AGLP35573 1532 aa16.41■□□□□ 0.22
UBE3B-209ENST00000539584 WASLO00401 505 aaPredicted RBP16.41■□□□□ 0.22
UBE3B-209ENST00000539584 HMOX1P09601 288 aa16.41■□□□□ 0.22
UBE3B-209ENST00000539584 KLHL40Q2TBA0 621 aa16.41■□□□□ 0.22
UBE3B-209ENST00000539584 CASC1Q6TDU7 716 aa16.41■□□□□ 0.22
UBE3B-209ENST00000539584 CWC22Q9HCG8 908 aaKnown RBP16.41■□□□□ 0.22
UBE3B-209ENST00000539584 PLEKHM2Q8IWE5 1019 aa16.4■□□□□ 0.22
UBE3B-209ENST00000539584 COG3Q96JB2 828 aa16.4■□□□□ 0.22
UBE3B-209ENST00000539584 ESPNB1AK53 854 aa16.4■□□□□ 0.22
UBE3B-209ENST00000539584 TTC22Q5TAA0 569 aa16.4■□□□□ 0.22
UBE3B-209ENST00000539584 ANKRD44Q8N8A2 993 aa16.4■□□□□ 0.22
UBE3B-209ENST00000539584 UBE2Q2Q8WVN8 375 aa16.4■□□□□ 0.22
UBE3B-209ENST00000539584 KIAA0232Q92628 1395 aa16.39■□□□□ 0.21
UBE3B-209ENST00000539584 A2ML1A8K2U0 1454 aa16.39■□□□□ 0.21
UBE3B-209ENST00000539584 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.39■□□□□ 0.21
UBE3B-209ENST00000539584 PTPRCP08575 1304 aa16.39■□□□□ 0.21
UBE3B-209ENST00000539584 C1orf115Q9H7X2 142 aa16.38■□□□□ 0.21
UBE3B-209ENST00000539584 EMILIN1Q9Y6C2 1016 aa16.38■□□□□ 0.21
UBE3B-209ENST00000539584 SPATA31D1Q6ZQQ2 1576 aa16.38■□□□□ 0.21
UBE3B-209ENST00000539584 SETD1AO15047 1707 aaKnown RBP16.38■□□□□ 0.21
UBE3B-209ENST00000539584 CCDC173Q0VFZ6 552 aa16.38■□□□□ 0.21
UBE3B-209ENST00000539584 C8orf58Q8NAV2 365 aa16.38■□□□□ 0.21
UBE3B-209ENST00000539584 ANP32BQ92688 251 aaKnown RBP16.38■□□□□ 0.21
UBE3B-209ENST00000539584 CCDC61Q9Y6R9 512 aa16.38■□□□□ 0.21
UBE3B-209ENST00000539584 RIMBP3CA6NJZ7 1639 aa16.37■□□□□ 0.21
UBE3B-209ENST00000539584 RIMBP3BA6NNM3 1639 aa16.37■□□□□ 0.21
UBE3B-209ENST00000539584 RIMBP3Q9UFD9 1639 aa16.37■□□□□ 0.21
UBE3B-209ENST00000539584 GSPT1P15170 499 aaKnown RBP16.37■□□□□ 0.21
UBE3B-209ENST00000539584 THUMPD2Q9BTF0 503 aaKnown RBP16.37■□□□□ 0.21
UBE3B-209ENST00000539584 FBXO31Q5XUX0 539 aaPredicted RBP16.36■□□□□ 0.21
UBE3B-209ENST00000539584 ARXQ96QS3 562 aa16.36■□□□□ 0.21
UBE3B-209ENST00000539584 CD2BP2O95400 341 aaKnown RBP16.36■□□□□ 0.21
UBE3B-209ENST00000539584 USP26Q9BXU7 913 aa16.36■□□□□ 0.21
UBE3B-209ENST00000539584 TECPR2O15040 1411 aa16.35■□□□□ 0.21
UBE3B-209ENST00000539584 MON2Q7Z3U7 1717 aa16.35■□□□□ 0.21
UBE3B-209ENST00000539584 ST18O60284 1047 aa16.35■□□□□ 0.21
UBE3B-209ENST00000539584 REC8O95072 547 aa16.35■□□□□ 0.21
UBE3B-209ENST00000539584 BAG4O95429 457 aaKnown RBP16.35■□□□□ 0.21
UBE3B-209ENST00000539584 HDGFP51858 240 aaKnown RBP16.35■□□□□ 0.21
UBE3B-209ENST00000539584 WAPLQ7Z5K2 1190 aa16.35■□□□□ 0.21
UBE3B-209ENST00000539584 GAS2L2Q8NHY3 880 aa16.35■□□□□ 0.21
UBE3B-209ENST00000539584 PPP1R9BQ96SB3 815 aa16.35■□□□□ 0.21
UBE3B-209ENST00000539584 NRKQ7Z2Y5 1582 aa16.35■□□□□ 0.21
UBE3B-209ENST00000539584 ELL2O00472 640 aaPredicted RBP16.34■□□□□ 0.21
UBE3B-209ENST00000539584 CHL1O00533 1208 aa16.34■□□□□ 0.21
UBE3B-209ENST00000539584 ZNF445P59923 1031 aa16.34■□□□□ 0.21
UBE3B-209ENST00000539584 NME9Q86XW9 330 aa16.34■□□□□ 0.21
UBE3B-209ENST00000539584 ATP10DQ9P241 1426 aa16.34■□□□□ 0.21
UBE3B-209ENST00000539584 HMMRO75330 724 aa16.33■□□□□ 0.21
UBE3B-209ENST00000539584 CYP2E1P05181 493 aaPredicted RBP16.33■□□□□ 0.21
UBE3B-209ENST00000539584 GAS2L3Q86XJ1 694 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms