RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 HMOX1P09601 288 aa25.38■■□□□ 1.65
TMEM260-203ENST00000539559 TSPYL6Q8N831 410 aa25.38■■□□□ 1.65
TMEM260-203ENST00000539559 NCOA3Q9Y6Q9 1424 aa25.37■■□□□ 1.65
TMEM260-203ENST00000539559 ERBB4Q15303 1308 aa25.37■■□□□ 1.65
TMEM260-203ENST00000539559 PRKAR2BP31323 418 aa25.37■■□□□ 1.65
TMEM260-203ENST00000539559 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.36■■□□□ 1.65
TMEM260-203ENST00000539559 IL16Q14005 1332 aa25.35■■□□□ 1.65
TMEM260-203ENST00000539559 CLCN1P35523 988 aa25.35■■□□□ 1.65
TMEM260-203ENST00000539559 SNX21Q969T3 373 aa25.35■■□□□ 1.65
TMEM260-203ENST00000539559 PPIP5K1Q6PFW1 1433 aa25.35■■□□□ 1.65
TMEM260-203ENST00000539559 PHACTR3Q96KR7 559 aa25.35■■□□□ 1.65
TMEM260-203ENST00000539559 TBC1D9Q6ZT07 1266 aa25.34■■□□□ 1.65
TMEM260-203ENST00000539559 ZBTB7BO15156 539 aaPredicted RBP25.34■■□□□ 1.65
TMEM260-203ENST00000539559 BMP2KLQ5H9B9 411 aa25.33■■□□□ 1.65
TMEM260-203ENST00000539559 SIRT2Q8IXJ6 389 aa25.32■■□□□ 1.64
TMEM260-203ENST00000539559 TERF2IPQ9NYB0 399 aa25.32■■□□□ 1.64
TMEM260-203ENST00000539559 ATAD2Q6PL18 1390 aa25.32■■□□□ 1.64
TMEM260-203ENST00000539559 RAB3GAP1Q15042 981 aa25.32■■□□□ 1.64
TMEM260-203ENST00000539559 CABP1Q9NZU7 370 aa25.32■■□□□ 1.64
TMEM260-203ENST00000539559 SSFA2P28290 1259 aa25.31■■□□□ 1.64
TMEM260-203ENST00000539559 DLC1Q96QB1 1528 aa25.31■■□□□ 1.64
TMEM260-203ENST00000539559 ALDH1L2Q3SY69 923 aa25.3■■□□□ 1.64
TMEM260-203ENST00000539559 GAS2L2Q8NHY3 880 aa25.3■■□□□ 1.64
TMEM260-203ENST00000539559 TMEM2Q9UHN6 1383 aa25.29■■□□□ 1.64
TMEM260-203ENST00000539559 CD163L1Q9NR16 1453 aa25.29■■□□□ 1.64
TMEM260-203ENST00000539559 SETD1AO15047 1707 aaKnown RBP25.29■■□□□ 1.64
TMEM260-203ENST00000539559 VAMP4O75379 141 aa25.29■■□□□ 1.64
TMEM260-203ENST00000539559 GBP4Q96PP9 640 aa25.29■■□□□ 1.64
TMEM260-203ENST00000539559 ESPNB1AK53 854 aa25.28■■□□□ 1.64
TMEM260-203ENST00000539559 MRPL50Q8N5N7 158 aaKnown RBP25.28■■□□□ 1.64
TMEM260-203ENST00000539559 NRXN3Q9Y4C0 1643 aa25.27■■□□□ 1.64
TMEM260-203ENST00000539559 UBR1Q8IWV7 1749 aa25.27■■□□□ 1.64
TMEM260-203ENST00000539559 CEBPAP49715 358 aaPredicted RBP25.27■■□□□ 1.64
TMEM260-203ENST00000539559 LRRC7Q96NW7 1537 aa25.26■■□□□ 1.64
TMEM260-203ENST00000539559 K7ELQ4 463 aaPredicted RBP25.26■■□□□ 1.63
TMEM260-203ENST00000539559 CDK19Q9BWU1 502 aa25.26■■□□□ 1.63
TMEM260-203ENST00000539559 FCHSD2O94868 740 aa25.25■■□□□ 1.63
TMEM260-203ENST00000539559 WAPLQ7Z5K2 1190 aa25.25■■□□□ 1.63
TMEM260-203ENST00000539559 HDGFL2Q7Z4V5 671 aaPredicted RBP25.25■■□□□ 1.63
TMEM260-203ENST00000539559 POLKQ9UBT6 870 aa25.25■■□□□ 1.63
TMEM260-203ENST00000539559 METP08581 1390 aa25.25■■□□□ 1.63
TMEM260-203ENST00000539559 CIZ1Q9ULV3 898 aaPredicted RBP25.24■■□□□ 1.63
TMEM260-203ENST00000539559 AK9Q5TCS8 1911 aa25.24■■□□□ 1.63
TMEM260-203ENST00000539559 GCC1Q96CN9 775 aa25.23■■□□□ 1.63
TMEM260-203ENST00000539559 TRIM44Q96DX7 344 aaPredicted RBP25.23■■□□□ 1.63
TMEM260-203ENST00000539559 MBIPQ9NS73 344 aa25.23■■□□□ 1.63
TMEM260-203ENST00000539559 GSPT1P15170 499 aaKnown RBP25.22■■□□□ 1.63
TMEM260-203ENST00000539559 EMILIN1Q9Y6C2 1016 aa25.22■■□□□ 1.63
TMEM260-203ENST00000539559 PNPLA6Q8IY17 1366 aa25.22■■□□□ 1.63
TMEM260-203ENST00000539559 C16orf71Q8IYS4 520 aaPredicted RBP25.22■■□□□ 1.63
TMEM260-203ENST00000539559 FAM83GA6ND36 823 aa25.21■■□□□ 1.63
TMEM260-203ENST00000539559 MED14O60244 1454 aa25.21■■□□□ 1.63
TMEM260-203ENST00000539559 C8orf58Q8NAV2 365 aa25.21■■□□□ 1.63
TMEM260-203ENST00000539559 DCTN1Q14203 1278 aa25.2■■□□□ 1.63
TMEM260-203ENST00000539559 NFE2L2Q16236 605 aa25.2■■□□□ 1.63
TMEM260-203ENST00000539559 ZRANB1Q9UGI0 708 aa25.2■■□□□ 1.62
TMEM260-203ENST00000539559 APBB1O00213 710 aa25.19■■□□□ 1.62
TMEM260-203ENST00000539559 FAM135BQ49AJ0 1406 aa25.19■■□□□ 1.62
TMEM260-203ENST00000539559 C3P01024 1663 aa25.18■■□□□ 1.62
TMEM260-203ENST00000539559 TWISTNBQ3B726 338 aaPredicted RBP25.18■■□□□ 1.62
TMEM260-203ENST00000539559 SIRT1Q96EB6 747 aa25.18■■□□□ 1.62
TMEM260-203ENST00000539559 TXNDC2Q86VQ3 553 aa25.18■■□□□ 1.62
TMEM260-203ENST00000539559 OTUD7AQ8TE49 926 aaPredicted RBP25.17■■□□□ 1.62
TMEM260-203ENST00000539559 FER1L4A9Z1Z3 1794 aa25.17■■□□□ 1.62
TMEM260-203ENST00000539559 CDC45O75419 566 aa25.17■■□□□ 1.62
TMEM260-203ENST00000539559 DDX49Q9Y6V7 483 aaKnown RBP25.17■■□□□ 1.62
TMEM260-203ENST00000539559 PKP1Q13835 747 aa25.16■■□□□ 1.62
TMEM260-203ENST00000539559 PLPPR3Q6T4P5 718 aa25.16■■□□□ 1.62
TMEM260-203ENST00000539559 TECPR2O15040 1411 aa25.15■■□□□ 1.62
TMEM260-203ENST00000539559 ABCC4O15439 1325 aa25.15■■□□□ 1.62
TMEM260-203ENST00000539559 BAG4O95429 457 aaKnown RBP25.15■■□□□ 1.62
TMEM260-203ENST00000539559 SKOR2Q2VWA4 1001 aaPredicted RBP25.15■■□□□ 1.62
TMEM260-203ENST00000539559 PLEKHG1Q9ULL1 1385 aa25.15■■□□□ 1.62
TMEM260-203ENST00000539559 LTKP29376 864 aa25.15■■□□□ 1.62
TMEM260-203ENST00000539559 BRPF1P55201 1214 aaPredicted RBP25.15■■□□□ 1.62
TMEM260-203ENST00000539559 PLEKHM2Q8IWE5 1019 aa25.15■■□□□ 1.62
TMEM260-203ENST00000539559 EID1Q9Y6B2 187 aa25.15■■□□□ 1.62
TMEM260-203ENST00000539559 ANKRD26Q9UPS8 1709 aa25.15■■□□□ 1.62
TMEM260-203ENST00000539559 NCLP19338 710 aaKnown RBP25.14■■□□□ 1.62
TMEM260-203ENST00000539559 ISY1Q9ULR0 285 aaKnown RBP25.14■■□□□ 1.62
TMEM260-203ENST00000539559 PTCH1Q13635 1447 aa25.14■■□□□ 1.62
TMEM260-203ENST00000539559 KRT24Q2M2I5 525 aa25.13■■□□□ 1.61
TMEM260-203ENST00000539559 MCTP1Q6DN14 999 aa25.13■■□□□ 1.61
TMEM260-203ENST00000539559 GNAI1P63096 354 aa25.13■■□□□ 1.61
TMEM260-203ENST00000539559 ADAMTS13Q76LX8 1427 aa25.13■■□□□ 1.61
TMEM260-203ENST00000539559 WASLO00401 505 aaPredicted RBP25.12■■□□□ 1.61
TMEM260-203ENST00000539559 ARHGAP45Q92619 1136 aa25.12■■□□□ 1.61
TMEM260-203ENST00000539559 KNDC1Q76NI1 1749 aa25.12■■□□□ 1.61
TMEM260-203ENST00000539559 NME9Q86XW9 330 aa25.12■■□□□ 1.61
TMEM260-203ENST00000539559 CHAMP1Q96JM3 812 aa25.12■■□□□ 1.61
TMEM260-203ENST00000539559 SMARCA5O60264 1052 aaPredicted RBP25.11■■□□□ 1.61
TMEM260-203ENST00000539559 NASPP49321 788 aaPredicted RBP25.11■■□□□ 1.61
TMEM260-203ENST00000539559 RRS1Q15050 365 aaKnown RBP25.11■■□□□ 1.61
TMEM260-203ENST00000539559 ZNF428Q96B54 188 aa25.11■■□□□ 1.61
TMEM260-203ENST00000539559 IFT57Q9NWB7 429 aa25.11■■□□□ 1.61
TMEM260-203ENST00000539559 PIK3R4Q99570 1358 aa25.11■■□□□ 1.61
TMEM260-203ENST00000539559 CPS1P31327 1500 aa25.1■■□□□ 1.61
TMEM260-203ENST00000539559 HSP90AA2PQ14568 343 aaPredicted RBP25.09■■□□□ 1.61
TMEM260-203ENST00000539559 GOLGA6L22H0YM25 854 aa25.09■■□□□ 1.61
TMEM260-203ENST00000539559 ZNF853P0CG23 659 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms