RNA–Protein interactions for RNA: ENST00000539429.1

GTF2H3-207, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 2

Gene GTF2H3, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-207ENST00000539429 BRINP3Q76B58 766 aa13.52□□□□□ -0.25
GTF2H3-207ENST00000539429 SIRT1Q96EB6 747 aa13.52□□□□□ -0.25
GTF2H3-207ENST00000539429 ADGRB1O14514 1584 aa13.52□□□□□ -0.25
GTF2H3-207ENST00000539429 CDC42BPGQ6DT37 1551 aa13.52□□□□□ -0.25
GTF2H3-207ENST00000539429 RGPD8O14715 1765 aaPredicted RBP13.51□□□□□ -0.25
GTF2H3-207ENST00000539429 ARHGEF28Q8N1W1 1705 aaKnown RBP13.51□□□□□ -0.25
GTF2H3-207ENST00000539429 DLC1Q96QB1 1528 aa13.51□□□□□ -0.25
GTF2H3-207ENST00000539429 MAP3K9P80192 1104 aa13.51□□□□□ -0.25
GTF2H3-207ENST00000539429 ESCO1Q5FWF5 840 aa13.51□□□□□ -0.25
GTF2H3-207ENST00000539429 MAMSTRQ6ZN01 415 aa13.51□□□□□ -0.25
GTF2H3-207ENST00000539429 OXER1Q8TDS5 423 aa13.51□□□□□ -0.25
GTF2H3-207ENST00000539429 FMN2Q9NZ56 1722 aa13.5□□□□□ -0.25
GTF2H3-207ENST00000539429 C1orf167Q5SNV9 1468 aa13.5□□□□□ -0.25
GTF2H3-207ENST00000539429 MINK1Q8N4C8 1332 aaPredicted RBP13.5□□□□□ -0.25
GTF2H3-207ENST00000539429 PDIA6Q15084 440 aa13.5□□□□□ -0.25
GTF2H3-207ENST00000539429 UPF1Q92900 1129 aaKnown RBP eCLIP13.5□□□□□ -0.252e-8■■■□□ 15.9
GTF2H3-207ENST00000539429 SCUBE2Q9NQ36 999 aa13.5□□□□□ -0.25
GTF2H3-207ENST00000539429 NHSL1Q5SYE7 1610 aa13.5□□□□□ -0.25
GTF2H3-207ENST00000539429 PRKCSHP14314 528 aaPredicted RBP13.49□□□□□ -0.25
GTF2H3-207ENST00000539429 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.49□□□□□ -0.25
GTF2H3-207ENST00000539429 ORAI2Q96SN7 254 aa13.49□□□□□ -0.25
GTF2H3-207ENST00000539429 HIRIP3Q9BW71 556 aaPredicted RBP13.49□□□□□ -0.25
GTF2H3-207ENST00000539429 AHDC1Q5TGY3 1603 aaPredicted RBP13.49□□□□□ -0.25
GTF2H3-207ENST00000539429 TRPM1Q7Z4N2 1603 aa13.49□□□□□ -0.25
GTF2H3-207ENST00000539429 SLC34A2O95436 690 aa13.48□□□□□ -0.25
GTF2H3-207ENST00000539429 NBPF1Q3BBV0 1214 aa13.48□□□□□ -0.25
GTF2H3-207ENST00000539429 COL16A1Q07092 1604 aaPredicted RBP13.48□□□□□ -0.25
GTF2H3-207ENST00000539429 MED1Q15648 1581 aaPredicted RBP13.48□□□□□ -0.25
GTF2H3-207ENST00000539429 SMYD5Q6GMV2 418 aa13.47□□□□□ -0.25
GTF2H3-207ENST00000539429 CCER1Q8TC90 406 aaPredicted RBP13.47□□□□□ -0.25
GTF2H3-207ENST00000539429 DDX17Q92841 729 aaKnown RBP13.47□□□□□ -0.25
GTF2H3-207ENST00000539429 ROCK2O75116 1388 aaKnown RBP13.46□□□□□ -0.25
GTF2H3-207ENST00000539429 JCADQ9P266 1359 aa13.46□□□□□ -0.25
GTF2H3-207ENST00000539429 PTCD2Q8WV60 388 aaKnown RBP13.46□□□□□ -0.25
GTF2H3-207ENST00000539429 LRRC59Q96AG4 307 aaKnown RBP13.46□□□□□ -0.25
GTF2H3-207ENST00000539429 KIF1AQ12756 1690 aa13.45□□□□□ -0.26
GTF2H3-207ENST00000539429 MEX3CQ5U5Q3 659 aaKnown RBP13.45□□□□□ -0.26
GTF2H3-207ENST00000539429 LMOD2Q6P5Q4 547 aa13.45□□□□□ -0.26
GTF2H3-207ENST00000539429 SLAIN1Q8ND83 568 aa13.45□□□□□ -0.26
GTF2H3-207ENST00000539429 NPHP3Q7Z494 1330 aa13.44□□□□□ -0.26
GTF2H3-207ENST00000539429 SHPRHQ149N8 1683 aa13.44□□□□□ -0.26
GTF2H3-207ENST00000539429 QRICH2Q9H0J4 1663 aa13.44□□□□□ -0.26
GTF2H3-207ENST00000539429 TBC1D12O60347 775 aa13.44□□□□□ -0.26
GTF2H3-207ENST00000539429 ITSN1Q15811 1721 aa13.44□□□□□ -0.26
GTF2H3-207ENST00000539429 EIF3AQ14152 1382 aaKnown RBP13.44□□□□□ -0.26
GTF2H3-207ENST00000539429 NUTM2BA6NNL0 878 aaPredicted RBP13.43□□□□□ -0.26
GTF2H3-207ENST00000539429 NUTM2EB1AL46 878 aaPredicted RBP13.43□□□□□ -0.26
GTF2H3-207ENST00000539429 FOXO3O43524 673 aa13.43□□□□□ -0.26
GTF2H3-207ENST00000539429 ADGRB2O60241 1585 aa13.43□□□□□ -0.26
GTF2H3-207ENST00000539429 NUTM2AQ8IVF1 878 aaPredicted RBP13.43□□□□□ -0.26
GTF2H3-207ENST00000539429 CENPJQ9HC77 1338 aaPredicted RBP13.42□□□□□ -0.26
GTF2H3-207ENST00000539429 WASLO00401 505 aaPredicted RBP13.42□□□□□ -0.26
GTF2H3-207ENST00000539429 XPCQ01831 940 aaPredicted RBP13.42□□□□□ -0.26
GTF2H3-207ENST00000539429 MLLT3P42568 568 aaPredicted RBP13.41□□□□□ -0.26
GTF2H3-207ENST00000539429 NBPF8Q3BBV2 869 aa13.41□□□□□ -0.26
GTF2H3-207ENST00000539429 PMFBP1Q8TBY8 1022 aa13.41□□□□□ -0.26
GTF2H3-207ENST00000539429 CARD11Q9BXL7 1154 aa13.41□□□□□ -0.26
GTF2H3-207ENST00000539429 SPATA31A6Q5VVP1 1343 aa13.4□□□□□ -0.26
GTF2H3-207ENST00000539429 SRPK2P78362 688 aaKnown RBP13.4□□□□□ -0.26
GTF2H3-207ENST00000539429 PSME1Q06323 249 aa13.4□□□□□ -0.26
GTF2H3-207ENST00000539429 CLSPNQ9HAW4 1339 aa13.39□□□□□ -0.27
GTF2H3-207ENST00000539429 KRT28Q7Z3Y7 464 aa13.39□□□□□ -0.27
GTF2H3-207ENST00000539429 CDK19Q9BWU1 502 aa13.39□□□□□ -0.27
GTF2H3-207ENST00000539429 USP32Q8NFA0 1604 aa13.39□□□□□ -0.27
GTF2H3-207ENST00000539429 TULP4Q9NRJ4 1543 aa13.39□□□□□ -0.27
GTF2H3-207ENST00000539429 ANKARQ7Z5J8 1434 aa13.39□□□□□ -0.27
GTF2H3-207ENST00000539429 EVI5O60447 810 aa13.38□□□□□ -0.27
GTF2H3-207ENST00000539429 NGDNQ8NEJ9 315 aaKnown RBP13.38□□□□□ -0.27
GTF2H3-207ENST00000539429 SOS2Q07890 1332 aaPredicted RBP13.38□□□□□ -0.27
GTF2H3-207ENST00000539429 RALGAPBQ86X10 1494 aa13.36□□□□□ -0.27
GTF2H3-207ENST00000539429 GPRASP1Q5JY77 1395 aa13.36□□□□□ -0.27
GTF2H3-207ENST00000539429 ZNF316A6NFI3 1004 aaPredicted RBP13.36□□□□□ -0.27
GTF2H3-207ENST00000539429 NUDT16Q96DE0 195 aaKnown RBP13.36□□□□□ -0.27
GTF2H3-207ENST00000539429 PCDHGA4Q9Y5G9 962 aa13.36□□□□□ -0.27
GTF2H3-207ENST00000539429 PNPLA6Q8IY17 1366 aa13.35□□□□□ -0.27
GTF2H3-207ENST00000539429 DOK7Q18PE1 504 aa13.35□□□□□ -0.27
GTF2H3-207ENST00000539429 EVC2Q86UK5 1308 aa13.35□□□□□ -0.27
GTF2H3-207ENST00000539429 PXDNQ92626 1479 aa13.35□□□□□ -0.27
GTF2H3-207ENST00000539429 ADAMTS2O95450 1211 aa13.34□□□□□ -0.27
GTF2H3-207ENST00000539429 PTGER2P43116 358 aa13.34□□□□□ -0.27
GTF2H3-207ENST00000539429 TIMELESSQ9UNS1 1208 aa13.34□□□□□ -0.27
GTF2H3-207ENST00000539429 PRR36Q9H6K5 1346 aa13.34□□□□□ -0.27
GTF2H3-207ENST00000539429 HOXB3P14651 431 aaPredicted RBP13.33□□□□□ -0.28
GTF2H3-207ENST00000539429 ANO8Q9HCE9 1232 aaPredicted RBP13.33□□□□□ -0.28
GTF2H3-207ENST00000539429 LRP6O75581 1613 aa13.32□□□□□ -0.28
GTF2H3-207ENST00000539429 ATP7BP35670 1465 aa13.32□□□□□ -0.28
GTF2H3-207ENST00000539429 GRXCR2A6NFK2 248 aa13.32□□□□□ -0.28
GTF2H3-207ENST00000539429 C8orf37Q96NL8 207 aa13.32□□□□□ -0.28
GTF2H3-207ENST00000539429 TOPAZ1Q8N9V7 1692 aa13.31□□□□□ -0.28
GTF2H3-207ENST00000539429 MARF1Q9Y4F3 1742 aaKnown RBP13.31□□□□□ -0.28
GTF2H3-207ENST00000539429 OTUD5Q96G74 571 aa13.31□□□□□ -0.28
GTF2H3-207ENST00000539429 NGLY1Q96IV0 654 aa13.31□□□□□ -0.28
GTF2H3-207ENST00000539429 SPATA31A3Q5VYP0 1347 aa13.31□□□□□ -0.28
GTF2H3-207ENST00000539429 COL22A1Q8NFW1 1626 aaPredicted RBP13.31□□□□□ -0.28
GTF2H3-207ENST00000539429 TNS3Q68CZ2 1445 aa13.3□□□□□ -0.28
GTF2H3-207ENST00000539429 PPIP5K1Q6PFW1 1433 aa13.3□□□□□ -0.28
GTF2H3-207ENST00000539429 RIMBP2O15034 1052 aa13.3□□□□□ -0.28
GTF2H3-207ENST00000539429 RBM26Q5T8P6 1007 aaKnown RBP13.3□□□□□ -0.28
GTF2H3-207ENST00000539429 LHX8Q68G74 356 aa13.3□□□□□ -0.28
GTF2H3-207ENST00000539429 ILDR2Q71H61 639 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms