RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 CABP1Q9NZU7 370 aa8.86□□□□□ -0.99
PROM1-219ENST00000539194 VAMP4O75379 141 aa8.86□□□□□ -0.99
PROM1-219ENST00000539194 SIRT2Q8IXJ6 389 aa8.86□□□□□ -0.99
PROM1-219ENST00000539194 ATP10DQ9P241 1426 aa8.86□□□□□ -0.99
PROM1-219ENST00000539194 CACNA1FO60840 1977 aa8.86□□□□□ -0.99
PROM1-219ENST00000539194 TMEM57Q8N5G2 664 aa8.86□□□□□ -0.99
PROM1-219ENST00000539194 DDX19BQ9UMR2 479 aa8.86□□□□□ -0.99
PROM1-219ENST00000539194 MINK1Q8N4C8 1332 aaPredicted RBP8.86□□□□□ -0.99
PROM1-219ENST00000539194 SLIT1O75093 1534 aa8.86□□□□□ -0.99
PROM1-219ENST00000539194 DIAPH1O60610 1272 aaKnown RBP8.85□□□□□ -0.99
PROM1-219ENST00000539194 MRPL50Q8N5N7 158 aaKnown RBP8.85□□□□□ -0.99
PROM1-219ENST00000539194 USP31Q70CQ4 1352 aa8.85□□□□□ -0.99
PROM1-219ENST00000539194 PHRF1Q9P1Y6 1649 aaKnown RBP8.85□□□□□ -0.99
PROM1-219ENST00000539194 ARHGAP23Q9P227 1491 aa8.85□□□□□ -0.99
PROM1-219ENST00000539194 KIF16BQ96L93 1317 aa8.85□□□□□ -0.99
PROM1-219ENST00000539194 RIPK4P57078 832 aa8.84□□□□□ -0.99
PROM1-219ENST00000539194 CRYBG1Q9Y4K1 1723 aa8.84□□□□□ -0.99
PROM1-219ENST00000539194 PRR36Q9H6K5 1346 aa8.84□□□□□ -0.99
PROM1-219ENST00000539194 DIP2AQ14689 1571 aa8.84□□□□□ -1
PROM1-219ENST00000539194 SRPK2P78362 688 aaKnown RBP8.83□□□□□ -1
PROM1-219ENST00000539194 NFE2L2Q16236 605 aa8.83□□□□□ -1
PROM1-219ENST00000539194 CRB1P82279 1406 aa8.83□□□□□ -1
PROM1-219ENST00000539194 PTPRUQ92729 1446 aa8.83□□□□□ -1
PROM1-219ENST00000539194 FSD2A1L4K1 749 aa8.83□□□□□ -1
PROM1-219ENST00000539194 WASLO00401 505 aaPredicted RBP8.83□□□□□ -1
PROM1-219ENST00000539194 CYB5RLQ6IPT4 315 aa8.83□□□□□ -1
PROM1-219ENST00000539194 WAPLQ7Z5K2 1190 aa8.83□□□□□ -1
PROM1-219ENST00000539194 IFT57Q9NWB7 429 aa8.83□□□□□ -1
PROM1-219ENST00000539194 FBLN1P23142 703 aa8.82□□□□□ -1
PROM1-219ENST00000539194 STK26Q9P289 416 aa8.82□□□□□ -1
PROM1-219ENST00000539194 MED1Q15648 1581 aaPredicted RBP8.82□□□□□ -1
PROM1-219ENST00000539194 SAFB2Q14151 953 aaKnown RBP eCLIP8.82□□□□□ -1
PROM1-219ENST00000539194 TSPYL6Q8N831 410 aa8.82□□□□□ -1
PROM1-219ENST00000539194 SNX21Q969T3 373 aa8.82□□□□□ -1
PROM1-219ENST00000539194 SMC4Q9NTJ3 1288 aa8.82□□□□□ -1
PROM1-219ENST00000539194 ROBO2Q9HCK4 1378 aa8.82□□□□□ -1
PROM1-219ENST00000539194 HDGFL2Q7Z4V5 671 aaPredicted RBP8.81□□□□□ -1
PROM1-219ENST00000539194 PRKAR2BP31323 418 aa8.81□□□□□ -1
PROM1-219ENST00000539194 BMP2KLQ5H9B9 411 aa8.81□□□□□ -1
PROM1-219ENST00000539194 PNNQ9H307 717 aaKnown RBP8.81□□□□□ -1
PROM1-219ENST00000539194 MBIPQ9NS73 344 aa8.81□□□□□ -1
PROM1-219ENST00000539194 USP6P35125 1406 aa8.81□□□□□ -1
PROM1-219ENST00000539194 BRPF3Q9ULD4 1205 aa8.8□□□□□ -1
PROM1-219ENST00000539194 KDM3BQ7LBC6 1761 aa8.8□□□□□ -1
PROM1-219ENST00000539194 KDRP35968 1356 aa8.8□□□□□ -1
PROM1-219ENST00000539194 TMEM2Q9UHN6 1383 aa8.8□□□□□ -1
PROM1-219ENST00000539194 POGKQ9P215 609 aa8.8□□□□□ -1
PROM1-219ENST00000539194 EMILIN1Q9Y6C2 1016 aa8.8□□□□□ -1
PROM1-219ENST00000539194 CFAP44Q96MT7 982 aa8.8□□□□□ -1
PROM1-219ENST00000539194 ZRANB1Q9UGI0 708 aa8.8□□□□□ -1
PROM1-219ENST00000539194 KIAA0232Q92628 1395 aa8.8□□□□□ -1
PROM1-219ENST00000539194 PLEKHG1Q9ULL1 1385 aa8.8□□□□□ -1
PROM1-219ENST00000539194 CAMTA1Q9Y6Y1 1673 aa8.8□□□□□ -1
PROM1-219ENST00000539194 CANXP27824 592 aaKnown RBP8.8□□□□□ -1
PROM1-219ENST00000539194 CLEC17AQ6ZS10 378 aa8.79□□□□□ -1
PROM1-219ENST00000539194 CHD1LQ86WJ1 897 aa8.79□□□□□ -1
PROM1-219ENST00000539194 C22orf23Q9BZE7 217 aa8.79□□□□□ -1
PROM1-219ENST00000539194 U2SURPO15042 1029 aaKnown RBP8.79□□□□□ -1
PROM1-219ENST00000539194 NME9Q86XW9 330 aa8.79□□□□□ -1
PROM1-219ENST00000539194 CEP170BQ9Y4F5 1589 aaPredicted RBP8.79□□□□□ -1
PROM1-219ENST00000539194 SIPA1L3O60292 1781 aaPredicted RBP8.79□□□□□ -1
PROM1-219ENST00000539194 ADAMTS7Q9UKP4 1686 aa8.78□□□□□ -1
PROM1-219ENST00000539194 LTN1O94822 1766 aa8.78□□□□□ -1
PROM1-219ENST00000539194 NCKAP5LQ9HCH0 1330 aa8.78□□□□□ -1
PROM1-219ENST00000539194 PLEKHG3A1L390 1219 aa8.78□□□□□ -1
PROM1-219ENST00000539194 INTS3Q68E01 1043 aaKnown RBP8.78□□□□□ -1
PROM1-219ENST00000539194 FTSJ3Q8IY81 847 aaKnown RBP8.78□□□□□ -1
PROM1-219ENST00000539194 C8orf58Q8NAV2 365 aa8.78□□□□□ -1
PROM1-219ENST00000539194 ITPRIPQ8IWB1 547 aa8.78□□□□□ -1
PROM1-219ENST00000539194 GCC1Q96CN9 775 aa8.78□□□□□ -1
PROM1-219ENST00000539194 BECN1Q14457 450 aa8.77□□□□□ -1.01
PROM1-219ENST00000539194 CHD2O14647 1828 aaKnown RBP8.77□□□□□ -1.01
PROM1-219ENST00000539194 IPO8O15397 1037 aaKnown RBP8.77□□□□□ -1.01
PROM1-219ENST00000539194 NUDT16Q96DE0 195 aaKnown RBP8.77□□□□□ -1.01
PROM1-219ENST00000539194 LMO7Q8WWI1 1683 aa8.77□□□□□ -1.01
PROM1-219ENST00000539194 CHL1O00533 1208 aa8.77□□□□□ -1.01
PROM1-219ENST00000539194 CD2BP2O95400 341 aaKnown RBP8.77□□□□□ -1.01
PROM1-219ENST00000539194 RTL1A6NKG5 1358 aa8.76□□□□□ -1.01
PROM1-219ENST00000539194 GSPT1P15170 499 aaKnown RBP8.76□□□□□ -1.01
PROM1-219ENST00000539194 THUMPD2Q9BTF0 503 aaKnown RBP8.76□□□□□ -1.01
PROM1-219ENST00000539194 CCDC61Q9Y6R9 512 aa8.76□□□□□ -1.01
PROM1-219ENST00000539194 GNAI1P63096 354 aa8.76□□□□□ -1.01
PROM1-219ENST00000539194 AK9Q5TCS8 1911 aa8.76□□□□□ -1.01
PROM1-219ENST00000539194 FER1L4A9Z1Z3 1794 aa8.76□□□□□ -1.01
PROM1-219ENST00000539194 ARHGEF10O15013 1369 aa8.76□□□□□ -1.01
PROM1-219ENST00000539194 MCM4P33991 863 aa8.76□□□□□ -1.01
PROM1-219ENST00000539194 SALL3Q9BXA9 1300 aa8.75□□□□□ -1.01
PROM1-219ENST00000539194 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.75□□□□□ -1.01
PROM1-219ENST00000539194 FAM69CQ0P6D2 419 aa8.75□□□□□ -1.01
PROM1-219ENST00000539194 EIF4A2Q14240 407 aaKnown RBP8.75□□□□□ -1.01
PROM1-219ENST00000539194 IL17RAQ96F46 866 aa8.75□□□□□ -1.01
PROM1-219ENST00000539194 DCTPP1Q9H773 170 aa8.75□□□□□ -1.01
PROM1-219ENST00000539194 TNRQ92752 1358 aa8.75□□□□□ -1.01
PROM1-219ENST00000539194 ZNF142P52746 1687 aaPredicted RBP8.75□□□□□ -1.01
PROM1-219ENST00000539194 RGPD2P0DJD1 1756 aa8.74□□□□□ -1.01
PROM1-219ENST00000539194 FAM83GA6ND36 823 aa8.74□□□□□ -1.01
PROM1-219ENST00000539194 HMOX1P09601 288 aa8.74□□□□□ -1.01
PROM1-219ENST00000539194 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.74□□□□□ -1.01
PROM1-219ENST00000539194 NFAT5O94916 1531 aa8.74□□□□□ -1.01
PROM1-219ENST00000539194 CALD1Q05682 793 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms