RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 FLT4P35916 1363 aa19.14■□□□□ 0.66
ATL3-203ENST00000538786 SOX12O15370 315 aa19.14■□□□□ 0.65
ATL3-203ENST00000538786 USP54Q70EL1 1684 aa19.14■□□□□ 0.65
ATL3-203ENST00000538786 KDM4FA0A1W2PPD8 638 aa19.13■□□□□ 0.65
ATL3-203ENST00000538786 EXOSC9Q06265 439 aaKnown RBP19.13■□□□□ 0.65
ATL3-203ENST00000538786 LMOD3Q0VAK6 560 aa19.13■□□□□ 0.65
ATL3-203ENST00000538786 C14orf37Q86TY3 774 aa19.13■□□□□ 0.65
ATL3-203ENST00000538786 KIF24Q5T7B8 1368 aa19.13■□□□□ 0.65
ATL3-203ENST00000538786 SULT6B1Q6IMI4 303 aa19.12■□□□□ 0.65
ATL3-203ENST00000538786 ABTB2Q8N961 1025 aa19.12■□□□□ 0.65
ATL3-203ENST00000538786 ESCO1Q5FWF5 840 aa19.12■□□□□ 0.65
ATL3-203ENST00000538786 FRAT1Q92837 279 aaPredicted RBP19.12■□□□□ 0.65
ATL3-203ENST00000538786 PAK3O75914 559 aaPredicted RBP19.11■□□□□ 0.65
ATL3-203ENST00000538786 RGPD1P0DJD0 1748 aa19.11■□□□□ 0.65
ATL3-203ENST00000538786 AMPHP49418 695 aa19.1■□□□□ 0.65
ATL3-203ENST00000538786 PROSER2Q86WR7 435 aaPredicted RBP19.1■□□□□ 0.65
ATL3-203ENST00000538786 AEBP1Q8IUX7 1158 aa19.1■□□□□ 0.65
ATL3-203ENST00000538786 ARHGEF10O15013 1369 aa19.1■□□□□ 0.65
ATL3-203ENST00000538786 MARF1Q9Y4F3 1742 aaKnown RBP19.08■□□□□ 0.65
ATL3-203ENST00000538786 KDM2BQ8NHM5 1336 aa19.08■□□□□ 0.65
ATL3-203ENST00000538786 NUTM2GQ5VZR2 741 aa19.08■□□□□ 0.65
ATL3-203ENST00000538786 BCL2L13Q9BXK5 485 aa19.08■□□□□ 0.65
ATL3-203ENST00000538786 IFT57Q9NWB7 429 aa19.08■□□□□ 0.65
ATL3-203ENST00000538786 GNAI1P63096 354 aa19.08■□□□□ 0.64
ATL3-203ENST00000538786 PSME1Q06323 249 aa19.08■□□□□ 0.64
ATL3-203ENST00000538786 PANK1Q8TE04 598 aa19.08■□□□□ 0.64
ATL3-203ENST00000538786 ZNF853P0CG23 659 aa19.06■□□□□ 0.64
ATL3-203ENST00000538786 AAMPQ13685 434 aa19.06■□□□□ 0.64
ATL3-203ENST00000538786 CENPQQ7L2Z9 268 aaPredicted RBP19.06■□□□□ 0.64
ATL3-203ENST00000538786 THUMPD2Q9BTF0 503 aaKnown RBP19.06■□□□□ 0.64
ATL3-203ENST00000538786 C19orf44Q9H6X5 657 aa19.06■□□□□ 0.64
ATL3-203ENST00000538786 SMC4Q9NTJ3 1288 aa19.06■□□□□ 0.64
ATL3-203ENST00000538786 COG6Q9Y2V7 657 aa19.06■□□□□ 0.64
ATL3-203ENST00000538786 KDRP35968 1356 aa19.05■□□□□ 0.64
ATL3-203ENST00000538786 IGSF1Q8N6C5 1336 aa19.05■□□□□ 0.64
ATL3-203ENST00000538786 HOXC9P31274 260 aa19.05■□□□□ 0.64
ATL3-203ENST00000538786 ZKSCAN2Q63HK3 967 aa19.05■□□□□ 0.64
ATL3-203ENST00000538786 SSH1Q8WYL5 1049 aa19.05■□□□□ 0.64
ATL3-203ENST00000538786 ZNF428Q96B54 188 aa19.05■□□□□ 0.64
ATL3-203ENST00000538786 LAS1LQ9Y4W2 734 aaKnown RBP19.05■□□□□ 0.64
ATL3-203ENST00000538786 MS4A1P11836 297 aa19.04■□□□□ 0.64
ATL3-203ENST00000538786 CFAP44Q96MT7 982 aa19.04■□□□□ 0.64
ATL3-203ENST00000538786 ORAI2Q96SN7 254 aa19.04■□□□□ 0.64
ATL3-203ENST00000538786 RTL1A6NKG5 1358 aa19.04■□□□□ 0.64
ATL3-203ENST00000538786 TCERG1O14776 1098 aaKnown RBP19.04■□□□□ 0.64
ATL3-203ENST00000538786 ALDH1L2Q3SY69 923 aa19.04■□□□□ 0.64
ATL3-203ENST00000538786 CLUAP1Q96AJ1 413 aa19.03■□□□□ 0.64
ATL3-203ENST00000538786 RLBP1P12271 317 aa19.02■□□□□ 0.64
ATL3-203ENST00000538786 EYA1Q99502 592 aa19.02■□□□□ 0.64
ATL3-203ENST00000538786 FAM83GA6ND36 823 aa19.02■□□□□ 0.63
ATL3-203ENST00000538786 MBIPQ9NS73 344 aa19.02■□□□□ 0.63
ATL3-203ENST00000538786 NCOA3Q9Y6Q9 1424 aa19.01■□□□□ 0.63
ATL3-203ENST00000538786 KCNH5Q8NCM2 988 aa19.01■□□□□ 0.63
ATL3-203ENST00000538786 C1orf167Q5SNV9 1468 aa19.01■□□□□ 0.63
ATL3-203ENST00000538786 DLG5Q8TDM6 1919 aa19■□□□□ 0.63
ATL3-203ENST00000538786 FOXO3O43524 673 aa19■□□□□ 0.63
ATL3-203ENST00000538786 TNNQ9UQP3 1299 aa19■□□□□ 0.63
ATL3-203ENST00000538786 NFAT5O94916 1531 aa19■□□□□ 0.63
ATL3-203ENST00000538786 KIF16BQ96L93 1317 aa19■□□□□ 0.63
ATL3-203ENST00000538786 DZIP1LQ8IYY4 767 aaKnown RBP19■□□□□ 0.63
ATL3-203ENST00000538786 TMEM94Q12767 1356 aa18.99■□□□□ 0.63
ATL3-203ENST00000538786 BRPF1P55201 1214 aaPredicted RBP18.99■□□□□ 0.63
ATL3-203ENST00000538786 FTSJ3Q8IY81 847 aaKnown RBP18.99■□□□□ 0.63
ATL3-203ENST00000538786 DCCP43146 1447 aa18.99■□□□□ 0.63
ATL3-203ENST00000538786 DCTN1Q14203 1278 aa18.98■□□□□ 0.63
ATL3-203ENST00000538786 ATF7IPQ6VMQ6 1270 aa18.98■□□□□ 0.63
ATL3-203ENST00000538786 KIF1AQ12756 1690 aa18.98■□□□□ 0.63
ATL3-203ENST00000538786 IPO8O15397 1037 aaKnown RBP18.98■□□□□ 0.63
ATL3-203ENST00000538786 VAMP4O75379 141 aa18.98■□□□□ 0.63
ATL3-203ENST00000538786 TRIM27P14373 513 aa18.98■□□□□ 0.63
ATL3-203ENST00000538786 HSPA2P54652 639 aa18.98■□□□□ 0.63
ATL3-203ENST00000538786 MVPQ14764 893 aaKnown RBP18.98■□□□□ 0.63
ATL3-203ENST00000538786 IP6K1Q92551 441 aa18.98■□□□□ 0.63
ATL3-203ENST00000538786 NOB1Q9ULX3 412 aaKnown RBP18.97■□□□□ 0.63
ATL3-203ENST00000538786 ATF3P18847 181 aa18.96■□□□□ 0.63
ATL3-203ENST00000538786 MTHFSDQ2M296 383 aaKnown RBP18.96■□□□□ 0.63
ATL3-203ENST00000538786 GAS2L2Q8NHY3 880 aa18.96■□□□□ 0.63
ATL3-203ENST00000538786 MCM10Q7L590 875 aa18.95■□□□□ 0.62
ATL3-203ENST00000538786 KRT28Q7Z3Y7 464 aa18.95■□□□□ 0.62
ATL3-203ENST00000538786 TSPYL6Q8N831 410 aa18.95■□□□□ 0.62
ATL3-203ENST00000538786 MST1RQ04912 1400 aa18.95■□□□□ 0.62
ATL3-203ENST00000538786 LMTK3Q96Q04 1460 aa18.95■□□□□ 0.62
ATL3-203ENST00000538786 SLIT3O75094 1523 aa18.94■□□□□ 0.62
ATL3-203ENST00000538786 CHL1O00533 1208 aa18.94■□□□□ 0.62
ATL3-203ENST00000538786 XPCQ01831 940 aaPredicted RBP18.94■□□□□ 0.62
ATL3-203ENST00000538786 TWISTNBQ3B726 338 aaPredicted RBP18.94■□□□□ 0.62
ATL3-203ENST00000538786 STRCP1A6NGW2 1772 aa18.94■□□□□ 0.62
ATL3-203ENST00000538786 IGHDP01880 384 aa18.93■□□□□ 0.62
ATL3-203ENST00000538786 C8orf58Q8NAV2 365 aa18.93■□□□□ 0.62
ATL3-203ENST00000538786 RTF1Q92541 710 aaKnown RBP18.93■□□□□ 0.62
ATL3-203ENST00000538786 USP19O94966 1318 aa18.93■□□□□ 0.62
ATL3-203ENST00000538786 CRB1P82279 1406 aa18.93■□□□□ 0.62
ATL3-203ENST00000538786 PHRF1Q9P1Y6 1649 aaKnown RBP18.93■□□□□ 0.62
ATL3-203ENST00000538786 TRPM3Q9HCF6 1732 aaPredicted RBP18.93■□□□□ 0.62
ATL3-203ENST00000538786 LTN1O94822 1766 aa18.93■□□□□ 0.62
ATL3-203ENST00000538786 HTATSF1O43719 755 aaKnown RBP18.92■□□□□ 0.62
ATL3-203ENST00000538786 GCP02774 474 aa18.92■□□□□ 0.62
ATL3-203ENST00000538786 LTV1Q96GA3 475 aaPredicted RBP18.92■□□□□ 0.62
ATL3-203ENST00000538786 MRPL50Q8N5N7 158 aaKnown RBP18.92■□□□□ 0.62
ATL3-203ENST00000538786 ARHGAP45Q92619 1136 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms