RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 RIMS1Q86UR5 1692 aaKnown RBP20.08■□□□□ 0.81
MKS1-204ENST00000537529 IGHDP01880 384 aa20.08■□□□□ 0.81
MKS1-204ENST00000537529 DZIP1LQ8IYY4 767 aaKnown RBP20.08■□□□□ 0.81
MKS1-204ENST00000537529 USP31Q70CQ4 1352 aa20.08■□□□□ 0.8
MKS1-204ENST00000537529 MVPQ14764 893 aaKnown RBP20.07■□□□□ 0.8
MKS1-204ENST00000537529 SSH1Q8WYL5 1049 aa20.07■□□□□ 0.8
MKS1-204ENST00000537529 ANKARQ7Z5J8 1434 aa20.07■□□□□ 0.8
MKS1-204ENST00000537529 KIF16BQ96L93 1317 aa20.06■□□□□ 0.8
MKS1-204ENST00000537529 ALDH1L2Q3SY69 923 aa20.05■□□□□ 0.8
MKS1-204ENST00000537529 ZNF428Q96B54 188 aa20.05■□□□□ 0.8
MKS1-204ENST00000537529 GNAI1P63096 354 aa20.04■□□□□ 0.8
MKS1-204ENST00000537529 FAM161AQ3B820 660 aa20.04■□□□□ 0.8
MKS1-204ENST00000537529 NPM2Q86SE8 214 aaKnown RBP20.04■□□□□ 0.8
MKS1-204ENST00000537529 IFT57Q9NWB7 429 aa20.04■□□□□ 0.8
MKS1-204ENST00000537529 RGS3P49796 1198 aa20.04■□□□□ 0.8
MKS1-204ENST00000537529 EIF4A2Q14240 407 aaKnown RBP20.04■□□□□ 0.8
MKS1-204ENST00000537529 ATF7IPQ6VMQ6 1270 aa20.03■□□□□ 0.8
MKS1-204ENST00000537529 NGDNQ8NEJ9 315 aaKnown RBP20.03■□□□□ 0.8
MKS1-204ENST00000537529 LAS1LQ9Y4W2 734 aaKnown RBP20.03■□□□□ 0.8
MKS1-204ENST00000537529 IPO8O15397 1037 aaKnown RBP20.03■□□□□ 0.8
MKS1-204ENST00000537529 TRIM27P14373 513 aa20.03■□□□□ 0.8
MKS1-204ENST00000537529 ZNF142P52746 1687 aaPredicted RBP20.02■□□□□ 0.8
MKS1-204ENST00000537529 KCNA6P17658 529 aa20.01■□□□□ 0.79
MKS1-204ENST00000537529 NOB1Q9ULX3 412 aaKnown RBP20.01■□□□□ 0.79
MKS1-204ENST00000537529 PCDHB15Q9Y5E8 787 aa20.01■□□□□ 0.79
MKS1-204ENST00000537529 PEAK1Q9H792 1746 aa20.01■□□□□ 0.79
MKS1-204ENST00000537529 RWDD1Q9H446 243 aaPredicted RBP20.01■□□□□ 0.79
MKS1-204ENST00000537529 ZBTB47Q9UFB7 747 aaPredicted RBP20.01■□□□□ 0.79
MKS1-204ENST00000537529 FMN2Q9NZ56 1722 aa20■□□□□ 0.79
MKS1-204ENST00000537529 THUMPD2Q9BTF0 503 aaKnown RBP20■□□□□ 0.79
MKS1-204ENST00000537529 DDX19BQ9UMR2 479 aa20■□□□□ 0.79
MKS1-204ENST00000537529 ZNF853P0CG23 659 aa19.99■□□□□ 0.79
MKS1-204ENST00000537529 BRPF1P55201 1214 aaPredicted RBP19.99■□□□□ 0.79
MKS1-204ENST00000537529 ANKLE2Q86XL3 938 aa19.99■□□□□ 0.79
MKS1-204ENST00000537529 C8orf34Q49A92 452 aa19.98■□□□□ 0.79
MKS1-204ENST00000537529 RGPD1P0DJD0 1748 aa19.98■□□□□ 0.79
MKS1-204ENST00000537529 SULT6B1Q6IMI4 303 aa19.98■□□□□ 0.79
MKS1-204ENST00000537529 ITPRIPQ8IWB1 547 aa19.98■□□□□ 0.79
MKS1-204ENST00000537529 RGPD8O14715 1765 aaPredicted RBP19.97■□□□□ 0.79
MKS1-204ENST00000537529 SBNO1A3KN83 1393 aa19.97■□□□□ 0.79
MKS1-204ENST00000537529 ARHGEF10O15013 1369 aa19.97■□□□□ 0.79
MKS1-204ENST00000537529 DLG5Q8TDM6 1919 aa19.97■□□□□ 0.79
MKS1-204ENST00000537529 CFAP44Q96MT7 982 aa19.97■□□□□ 0.79
MKS1-204ENST00000537529 ADAMTSL3P82987 1691 aa19.97■□□□□ 0.79
MKS1-204ENST00000537529 FLT4P35916 1363 aa19.96■□□□□ 0.79
MKS1-204ENST00000537529 AEBP1Q8IUX7 1158 aa19.96■□□□□ 0.79
MKS1-204ENST00000537529 MBIPQ9NS73 344 aa19.96■□□□□ 0.79
MKS1-204ENST00000537529 PIK3C2AO00443 1686 aa19.96■□□□□ 0.79
MKS1-204ENST00000537529 PAK3O75914 559 aaPredicted RBP19.96■□□□□ 0.79
MKS1-204ENST00000537529 HSP90AB2PQ58FF8 381 aa19.96■□□□□ 0.79
MKS1-204ENST00000537529 MAP3K19Q56UN5 1328 aa19.96■□□□□ 0.79
MKS1-204ENST00000537529 VAMP4O75379 141 aa19.95■□□□□ 0.78
MKS1-204ENST00000537529 DDRGK1Q96HY6 314 aa19.95■□□□□ 0.78
MKS1-204ENST00000537529 SOX12O15370 315 aa19.94■□□□□ 0.78
MKS1-204ENST00000537529 TMEM57Q8N5G2 664 aa19.94■□□□□ 0.78
MKS1-204ENST00000537529 CHD2O14647 1828 aaKnown RBP19.93■□□□□ 0.78
MKS1-204ENST00000537529 MRPL50Q8N5N7 158 aaKnown RBP19.92■□□□□ 0.78
MKS1-204ENST00000537529 ARHGAP45Q92619 1136 aa19.92■□□□□ 0.78
MKS1-204ENST00000537529 USP54Q70EL1 1684 aa19.92■□□□□ 0.78
MKS1-204ENST00000537529 FAM83GA6ND36 823 aa19.91■□□□□ 0.78
MKS1-204ENST00000537529 HDAC1Q13547 482 aaPredicted RBP19.91■□□□□ 0.78
MKS1-204ENST00000537529 TWISTNBQ3B726 338 aaPredicted RBP19.91■□□□□ 0.78
MKS1-204ENST00000537529 PDZRN3Q9UPQ7 1066 aa19.91■□□□□ 0.78
MKS1-204ENST00000537529 AMPHP49418 695 aa19.9■□□□□ 0.78
MKS1-204ENST00000537529 TSPYL6Q8N831 410 aa19.9■□□□□ 0.78
MKS1-204ENST00000537529 KIF24Q5T7B8 1368 aa19.9■□□□□ 0.78
MKS1-204ENST00000537529 NLRP6P59044 892 aa19.9■□□□□ 0.78
MKS1-204ENST00000537529 DCTN1Q14203 1278 aa19.89■□□□□ 0.77
MKS1-204ENST00000537529 CHMP4BQ9H444 224 aaKnown RBP19.89■□□□□ 0.77
MKS1-204ENST00000537529 VIRMAQ69YN4 1812 aaKnown RBP19.89■□□□□ 0.77
MKS1-204ENST00000537529 ZBTB40Q9NUA8 1239 aa19.88■□□□□ 0.77
MKS1-204ENST00000537529 HAP1P54257 671 aaPredicted RBP19.88■□□□□ 0.77
MKS1-204ENST00000537529 KDRP35968 1356 aa19.87■□□□□ 0.77
MKS1-204ENST00000537529 C8orf58Q8NAV2 365 aa19.87■□□□□ 0.77
MKS1-204ENST00000537529 ADGRL3Q9HAR2 1447 aa19.87■□□□□ 0.77
MKS1-204ENST00000537529 PHF8Q9UPP1 1060 aa19.87■□□□□ 0.77
MKS1-204ENST00000537529 IGSF1Q8N6C5 1336 aa19.86■□□□□ 0.77
MKS1-204ENST00000537529 ELL2O00472 640 aaPredicted RBP19.86■□□□□ 0.77
MKS1-204ENST00000537529 NPHP4O75161 1426 aaPredicted RBP19.86■□□□□ 0.77
MKS1-204ENST00000537529 MARF1Q9Y4F3 1742 aaKnown RBP19.86■□□□□ 0.77
MKS1-204ENST00000537529 CHL1O00533 1208 aa19.84■□□□□ 0.77
MKS1-204ENST00000537529 ABTB2Q8N961 1025 aa19.84■□□□□ 0.77
MKS1-204ENST00000537529 API5Q9BZZ5 524 aaKnown RBP19.84■□□□□ 0.77
MKS1-204ENST00000537529 KIAA0232Q92628 1395 aa19.84■□□□□ 0.77
MKS1-204ENST00000537529 ABCC4O15439 1325 aa19.84■□□□□ 0.77
MKS1-204ENST00000537529 MCM10Q7L590 875 aa19.83■□□□□ 0.77
MKS1-204ENST00000537529 EYA1Q99502 592 aa19.83■□□□□ 0.76
MKS1-204ENST00000537529 SETD1BQ9UPS6 1966 aaKnown RBP19.83■□□□□ 0.76
MKS1-204ENST00000537529 CRB1P82279 1406 aa19.83■□□□□ 0.76
MKS1-204ENST00000537529 HOXC9P31274 260 aa19.82■□□□□ 0.76
MKS1-204ENST00000537529 GAS2L2Q8NHY3 880 aa19.82■□□□□ 0.76
MKS1-204ENST00000537529 RTL1A6NKG5 1358 aa19.82■□□□□ 0.76
MKS1-204ENST00000537529 NUTM2GQ5VZR2 741 aa19.82■□□□□ 0.76
MKS1-204ENST00000537529 SMC5Q8IY18 1101 aa19.82■□□□□ 0.76
MKS1-204ENST00000537529 RTF1Q92541 710 aaKnown RBP19.81■□□□□ 0.76
MKS1-204ENST00000537529 MTHFSDQ2M296 383 aaKnown RBP19.8■□□□□ 0.76
MKS1-204ENST00000537529 C14orf37Q86TY3 774 aa19.79■□□□□ 0.76
MKS1-204ENST00000537529 ZBTB7BO15156 539 aaPredicted RBP19.79■□□□□ 0.76
MKS1-204ENST00000537529 NWD1Q149M9 1564 aa19.78■□□□□ 0.76
MKS1-204ENST00000537529 HTATSF1O43719 755 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms