RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 ZKSCAN2Q63HK3 967 aa11.98□□□□□ -0.49
UBE3B-207ENST00000537063 PHACTR3Q96KR7 559 aa11.98□□□□□ -0.49
UBE3B-207ENST00000537063 NOP58Q9Y2X3 529 aaKnown RBP11.98□□□□□ -0.49
UBE3B-207ENST00000537063 MVPQ14764 893 aaKnown RBP11.97□□□□□ -0.49
UBE3B-207ENST00000537063 ZNF853P0CG23 659 aa11.97□□□□□ -0.49
UBE3B-207ENST00000537063 ALDH1L2Q3SY69 923 aa11.97□□□□□ -0.49
UBE3B-207ENST00000537063 ZNF428Q96B54 188 aa11.97□□□□□ -0.49
UBE3B-207ENST00000537063 C8orf34Q49A92 452 aa11.97□□□□□ -0.49
UBE3B-207ENST00000537063 SSH1Q8WYL5 1049 aa11.96□□□□□ -0.49
UBE3B-207ENST00000537063 BCL2L13Q9BXK5 485 aa11.96□□□□□ -0.49
UBE3B-207ENST00000537063 RRS1Q15050 365 aaKnown RBP11.96□□□□□ -0.5
UBE3B-207ENST00000537063 PMFBP1Q8TBY8 1022 aa11.96□□□□□ -0.5
UBE3B-207ENST00000537063 PPM1GO15355 546 aaPredicted RBP11.96□□□□□ -0.5
UBE3B-207ENST00000537063 CALD1Q05682 793 aaKnown RBP11.96□□□□□ -0.5
UBE3B-207ENST00000537063 FAM161AQ3B820 660 aa11.95□□□□□ -0.5
UBE3B-207ENST00000537063 IFT57Q9NWB7 429 aa11.95□□□□□ -0.5
UBE3B-207ENST00000537063 DZIP1LQ8IYY4 767 aaKnown RBP11.95□□□□□ -0.5
UBE3B-207ENST00000537063 PCDHB15Q9Y5E8 787 aa11.95□□□□□ -0.5
UBE3B-207ENST00000537063 KIF16BQ96L93 1317 aa11.95□□□□□ -0.5
UBE3B-207ENST00000537063 HMOX1P09601 288 aa11.94□□□□□ -0.5
UBE3B-207ENST00000537063 TRIM27P14373 513 aa11.94□□□□□ -0.5
UBE3B-207ENST00000537063 SMC4Q9NTJ3 1288 aa11.94□□□□□ -0.5
UBE3B-207ENST00000537063 NEFMP07197 916 aa11.94□□□□□ -0.5
UBE3B-207ENST00000537063 ATF7IPQ6VMQ6 1270 aa11.94□□□□□ -0.5
UBE3B-207ENST00000537063 LMOD3Q0VAK6 560 aa11.93□□□□□ -0.5
UBE3B-207ENST00000537063 EIF4A2Q14240 407 aaKnown RBP11.93□□□□□ -0.5
UBE3B-207ENST00000537063 ARHGEF10O15013 1369 aa11.93□□□□□ -0.5
UBE3B-207ENST00000537063 LRRC37A3O60309 1634 aa11.93□□□□□ -0.5
UBE3B-207ENST00000537063 PAK3O75914 559 aaPredicted RBP11.93□□□□□ -0.5
UBE3B-207ENST00000537063 GNAI1P63096 354 aa11.92□□□□□ -0.5
UBE3B-207ENST00000537063 SBNO1A3KN83 1393 aa11.92□□□□□ -0.5
UBE3B-207ENST00000537063 ERICH6Q7L0X2 663 aa11.92□□□□□ -0.5
UBE3B-207ENST00000537063 KDRP35968 1356 aa11.91□□□□□ -0.5
UBE3B-207ENST00000537063 KIF24Q5T7B8 1368 aa11.91□□□□□ -0.5
UBE3B-207ENST00000537063 NWD1Q149M9 1564 aa11.91□□□□□ -0.5
UBE3B-207ENST00000537063 NOB1Q9ULX3 412 aaKnown RBP11.91□□□□□ -0.5
UBE3B-207ENST00000537063 DDX19BQ9UMR2 479 aa11.91□□□□□ -0.5
UBE3B-207ENST00000537063 PHRF1Q9P1Y6 1649 aaKnown RBP11.91□□□□□ -0.5
UBE3B-207ENST00000537063 FTSJ3Q8IY81 847 aaKnown RBP11.91□□□□□ -0.5
UBE3B-207ENST00000537063 CFAP44Q96MT7 982 aa11.91□□□□□ -0.5
UBE3B-207ENST00000537063 FLT4P35916 1363 aa11.9□□□□□ -0.5
UBE3B-207ENST00000537063 SETD1BQ9UPS6 1966 aaKnown RBP11.9□□□□□ -0.5
UBE3B-207ENST00000537063 VAMP4O75379 141 aa11.9□□□□□ -0.5
UBE3B-207ENST00000537063 KCNA6P17658 529 aa11.9□□□□□ -0.5
UBE3B-207ENST00000537063 HDAC1Q13547 482 aaPredicted RBP11.9□□□□□ -0.5
UBE3B-207ENST00000537063 ARHGAP45Q92619 1136 aa11.9□□□□□ -0.5
UBE3B-207ENST00000537063 MBIPQ9NS73 344 aa11.9□□□□□ -0.5
UBE3B-207ENST00000537063 IPO8O15397 1037 aaKnown RBP11.9□□□□□ -0.51
UBE3B-207ENST00000537063 RWDD1Q9H446 243 aaPredicted RBP11.9□□□□□ -0.51
UBE3B-207ENST00000537063 MRPL50Q8N5N7 158 aaKnown RBP11.89□□□□□ -0.51
UBE3B-207ENST00000537063 ZBTB47Q9UFB7 747 aaPredicted RBP11.89□□□□□ -0.51
UBE3B-207ENST00000537063 RGS3P49796 1198 aa11.88□□□□□ -0.51
UBE3B-207ENST00000537063 THUMPD2Q9BTF0 503 aaKnown RBP11.88□□□□□ -0.51
UBE3B-207ENST00000537063 MAP3K19Q56UN5 1328 aa11.88□□□□□ -0.51
UBE3B-207ENST00000537063 LTN1O94822 1766 aa11.88□□□□□ -0.51
UBE3B-207ENST00000537063 AEBP1Q8IUX7 1158 aa11.88□□□□□ -0.51
UBE3B-207ENST00000537063 ZBTB40Q9NUA8 1239 aa11.88□□□□□ -0.51
UBE3B-207ENST00000537063 NUTM2FA1L443 756 aa11.87□□□□□ -0.51
UBE3B-207ENST00000537063 TRHP20396 242 aaPredicted RBP11.87□□□□□ -0.51
UBE3B-207ENST00000537063 TMEM57Q8N5G2 664 aa11.87□□□□□ -0.51
UBE3B-207ENST00000537063 CRB1P82279 1406 aa11.87□□□□□ -0.51
UBE3B-207ENST00000537063 ADGRL3Q9HAR2 1447 aa11.87□□□□□ -0.51
UBE3B-207ENST00000537063 HSP90AB2PQ58FF8 381 aa11.87□□□□□ -0.51
UBE3B-207ENST00000537063 ABCC4O15439 1325 aa11.87□□□□□ -0.51
UBE3B-207ENST00000537063 NFAT5O94916 1531 aa11.87□□□□□ -0.51
UBE3B-207ENST00000537063 DDRGK1Q96HY6 314 aa11.87□□□□□ -0.51
UBE3B-207ENST00000537063 IGSF1Q8N6C5 1336 aa11.87□□□□□ -0.51
UBE3B-207ENST00000537063 KIAA0232Q92628 1395 aa11.87□□□□□ -0.51
UBE3B-207ENST00000537063 SULT6B1Q6IMI4 303 aa11.86□□□□□ -0.51
UBE3B-207ENST00000537063 NPM2Q86SE8 214 aaKnown RBP11.86□□□□□ -0.51
UBE3B-207ENST00000537063 TSPYL6Q8N831 410 aa11.86□□□□□ -0.51
UBE3B-207ENST00000537063 PDZRN3Q9UPQ7 1066 aa11.86□□□□□ -0.51
UBE3B-207ENST00000537063 ITPRIPQ8IWB1 547 aa11.86□□□□□ -0.51
UBE3B-207ENST00000537063 RTL1A6NKG5 1358 aa11.86□□□□□ -0.51
UBE3B-207ENST00000537063 ANKLE2Q86XL3 938 aa11.85□□□□□ -0.51
UBE3B-207ENST00000537063 FAM83GA6ND36 823 aa11.85□□□□□ -0.51
UBE3B-207ENST00000537063 SMC5Q8IY18 1101 aa11.85□□□□□ -0.51
UBE3B-207ENST00000537063 NGDNQ8NEJ9 315 aaKnown RBP11.85□□□□□ -0.51
UBE3B-207ENST00000537063 USP19O94966 1318 aa11.85□□□□□ -0.51
UBE3B-207ENST00000537063 CHL1O00533 1208 aa11.84□□□□□ -0.51
UBE3B-207ENST00000537063 TWISTNBQ3B726 338 aaPredicted RBP11.84□□□□□ -0.51
UBE3B-207ENST00000537063 RGS12O14924 1447 aa11.84□□□□□ -0.51
UBE3B-207ENST00000537063 C8orf58Q8NAV2 365 aa11.84□□□□□ -0.51
UBE3B-207ENST00000537063 LAS1LQ9Y4W2 734 aaKnown RBP11.84□□□□□ -0.51
UBE3B-207ENST00000537063 NPHP4O75161 1426 aaPredicted RBP11.84□□□□□ -0.51
UBE3B-207ENST00000537063 PLPPR3Q6T4P5 718 aa11.84□□□□□ -0.51
UBE3B-207ENST00000537063 N4BP2Q86UW6 1770 aaPredicted RBP11.83□□□□□ -0.52
UBE3B-207ENST00000537063 TRPM3Q9HCF6 1732 aaPredicted RBP11.83□□□□□ -0.52
UBE3B-207ENST00000537063 FAM208AQ9UK61 1670 aaKnown RBP11.83□□□□□ -0.52
UBE3B-207ENST00000537063 ZBTB7BO15156 539 aaPredicted RBP11.82□□□□□ -0.52
UBE3B-207ENST00000537063 DCTN1Q14203 1278 aa11.82□□□□□ -0.52
UBE3B-207ENST00000537063 SLIT3O75094 1523 aa11.82□□□□□ -0.52
UBE3B-207ENST00000537063 CAMTA1Q9Y6Y1 1673 aa11.81□□□□□ -0.52
UBE3B-207ENST00000537063 CHMP4BQ9H444 224 aaKnown RBP11.81□□□□□ -0.52
UBE3B-207ENST00000537063 KIF1AQ12756 1690 aa11.81□□□□□ -0.52
UBE3B-207ENST00000537063 HOXC9P31274 260 aa11.81□□□□□ -0.52
UBE3B-207ENST00000537063 MED1Q15648 1581 aaPredicted RBP11.8□□□□□ -0.52
UBE3B-207ENST00000537063 EYA1Q99502 592 aa11.8□□□□□ -0.52
UBE3B-207ENST00000537063 HAP1P54257 671 aaPredicted RBP11.8□□□□□ -0.52
UBE3B-207ENST00000537063 HTATSF1O43719 755 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms