RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 SOX12O15370 315 aa29.38■■■□□ 2.29
HMGA2-206ENST00000536545 NLRP6P59044 892 aa29.37■■■□□ 2.29
HMGA2-206ENST00000536545 KIF24Q5T7B8 1368 aa29.37■■■□□ 2.29
HMGA2-206ENST00000536545 AEBP1Q8IUX7 1158 aa29.36■■■□□ 2.29
HMGA2-206ENST00000536545 EXOSC9Q06265 439 aaKnown RBP29.36■■■□□ 2.29
HMGA2-206ENST00000536545 RBM19Q9Y4C8 960 aaKnown RBP29.35■■■□□ 2.29
HMGA2-206ENST00000536545 SULT6B1Q6IMI4 303 aa29.34■■■□□ 2.29
HMGA2-206ENST00000536545 C14orf37Q86TY3 774 aa29.34■■■□□ 2.29
HMGA2-206ENST00000536545 CALD1Q05682 793 aaKnown RBP29.33■■■□□ 2.29
HMGA2-206ENST00000536545 LMOD3Q0VAK6 560 aa29.33■■■□□ 2.29
HMGA2-206ENST00000536545 CANXP27824 592 aaKnown RBP29.32■■■□□ 2.28
HMGA2-206ENST00000536545 ABTB2Q8N961 1025 aa29.32■■■□□ 2.28
HMGA2-206ENST00000536545 ESCO1Q5FWF5 840 aa29.31■■■□□ 2.28
HMGA2-206ENST00000536545 KDM2BQ8NHM5 1336 aa29.31■■■□□ 2.28
HMGA2-206ENST00000536545 NFAT5O94916 1531 aa29.31■■■□□ 2.28
HMGA2-206ENST00000536545 STRCP1A6NGW2 1772 aa29.31■■■□□ 2.28
HMGA2-206ENST00000536545 PROSER2Q86WR7 435 aaPredicted RBP29.3■■■□□ 2.28
HMGA2-206ENST00000536545 BCL2L13Q9BXK5 485 aa29.3■■■□□ 2.28
HMGA2-206ENST00000536545 KIF1AQ12756 1690 aa29.3■■■□□ 2.28
HMGA2-206ENST00000536545 KDRP35968 1356 aa29.29■■■□□ 2.28
HMGA2-206ENST00000536545 PAK3O75914 559 aaPredicted RBP29.29■■■□□ 2.28
HMGA2-206ENST00000536545 NUTM2GQ5VZR2 741 aa29.29■■■□□ 2.28
HMGA2-206ENST00000536545 RTL1A6NKG5 1358 aa29.29■■■□□ 2.28
HMGA2-206ENST00000536545 AMPHP49418 695 aa29.29■■■□□ 2.28
HMGA2-206ENST00000536545 FRAT1Q92837 279 aaPredicted RBP29.29■■■□□ 2.28
HMGA2-206ENST00000536545 THUMPD2Q9BTF0 503 aaKnown RBP29.29■■■□□ 2.28
HMGA2-206ENST00000536545 PANK1Q8TE04 598 aa29.28■■■□□ 2.28
HMGA2-206ENST00000536545 IFT57Q9NWB7 429 aa29.28■■■□□ 2.28
HMGA2-206ENST00000536545 IGSF1Q8N6C5 1336 aa29.27■■■□□ 2.28
HMGA2-206ENST00000536545 ZNF853P0CG23 659 aa29.27■■■□□ 2.28
HMGA2-206ENST00000536545 LTN1O94822 1766 aa29.26■■■□□ 2.27
HMGA2-206ENST00000536545 TRPM3Q9HCF6 1732 aaPredicted RBP29.26■■■□□ 2.27
HMGA2-206ENST00000536545 C1orf167Q5SNV9 1468 aa29.26■■■□□ 2.27
HMGA2-206ENST00000536545 HOXC9P31274 260 aa29.25■■■□□ 2.27
HMGA2-206ENST00000536545 GNAI1P63096 354 aa29.24■■■□□ 2.27
HMGA2-206ENST00000536545 ORAI2Q96SN7 254 aa29.24■■■□□ 2.27
HMGA2-206ENST00000536545 PHRF1Q9P1Y6 1649 aaKnown RBP29.24■■■□□ 2.27
HMGA2-206ENST00000536545 PSME1Q06323 249 aa29.24■■■□□ 2.27
HMGA2-206ENST00000536545 DCCP43146 1447 aa29.23■■■□□ 2.27
HMGA2-206ENST00000536545 NCOA3Q9Y6Q9 1424 aa29.23■■■□□ 2.27
HMGA2-206ENST00000536545 CENPQQ7L2Z9 268 aaPredicted RBP29.23■■■□□ 2.27
HMGA2-206ENST00000536545 SSH1Q8WYL5 1049 aa29.23■■■□□ 2.27
HMGA2-206ENST00000536545 SMC4Q9NTJ3 1288 aa29.23■■■□□ 2.27
HMGA2-206ENST00000536545 RLBP1P12271 317 aa29.22■■■□□ 2.27
HMGA2-206ENST00000536545 C19orf44Q9H6X5 657 aa29.22■■■□□ 2.27
HMGA2-206ENST00000536545 TNNQ9UQP3 1299 aa29.22■■■□□ 2.27
HMGA2-206ENST00000536545 COG6Q9Y2V7 657 aa29.22■■■□□ 2.27
HMGA2-206ENST00000536545 SLIT3O75094 1523 aa29.22■■■□□ 2.27
HMGA2-206ENST00000536545 TMEM94Q12767 1356 aa29.21■■■□□ 2.27
HMGA2-206ENST00000536545 EYA1Q99502 592 aa29.21■■■□□ 2.27
HMGA2-206ENST00000536545 FAM83GA6ND36 823 aa29.2■■■□□ 2.26
HMGA2-206ENST00000536545 ZKSCAN2Q63HK3 967 aa29.2■■■□□ 2.26
HMGA2-206ENST00000536545 CFAP44Q96MT7 982 aa29.19■■■□□ 2.26
HMGA2-206ENST00000536545 MBIPQ9NS73 344 aa29.19■■■□□ 2.26
HMGA2-206ENST00000536545 LAS1LQ9Y4W2 734 aaKnown RBP29.19■■■□□ 2.26
HMGA2-206ENST00000536545 MST1RQ04912 1400 aa29.19■■■□□ 2.26
HMGA2-206ENST00000536545 ALDH1L2Q3SY69 923 aa29.18■■■□□ 2.26
HMGA2-206ENST00000536545 ZNF428Q96B54 188 aa29.18■■■□□ 2.26
HMGA2-206ENST00000536545 LMTK3Q96Q04 1460 aa29.18■■■□□ 2.26
HMGA2-206ENST00000536545 CLUAP1Q96AJ1 413 aa29.18■■■□□ 2.26
HMGA2-206ENST00000536545 HSPA2P54652 639 aa29.17■■■□□ 2.26
HMGA2-206ENST00000536545 AAMPQ13685 434 aa29.17■■■□□ 2.26
HMGA2-206ENST00000536545 TCERG1O14776 1098 aaKnown RBP29.16■■■□□ 2.26
HMGA2-206ENST00000536545 FOXO3O43524 673 aa29.16■■■□□ 2.26
HMGA2-206ENST00000536545 DCTN1Q14203 1278 aa29.16■■■□□ 2.26
HMGA2-206ENST00000536545 KIF16BQ96L93 1317 aa29.15■■■□□ 2.26
HMGA2-206ENST00000536545 MS4A1P11836 297 aa29.13■■■□□ 2.25
HMGA2-206ENST00000536545 BRPF1P55201 1214 aaPredicted RBP29.13■■■□□ 2.25
HMGA2-206ENST00000536545 KCNH5Q8NCM2 988 aa29.13■■■□□ 2.25
HMGA2-206ENST00000536545 KDM4FA0A1W2PPD8 638 aa29.13■■■□□ 2.25
HMGA2-206ENST00000536545 DZIP1LQ8IYY4 767 aaKnown RBP29.13■■■□□ 2.25
HMGA2-206ENST00000536545 ALS2Q96Q42 1657 aa29.12■■■□□ 2.25
HMGA2-206ENST00000536545 USP19O94966 1318 aa29.12■■■□□ 2.25
HMGA2-206ENST00000536545 TRIM27P14373 513 aa29.12■■■□□ 2.25
HMGA2-206ENST00000536545 IP6K1Q92551 441 aa29.12■■■□□ 2.25
HMGA2-206ENST00000536545 LRRC37A3O60309 1634 aa29.12■■■□□ 2.25
HMGA2-206ENST00000536545 CRB1P82279 1406 aa29.11■■■□□ 2.25
HMGA2-206ENST00000536545 VAMP4O75379 141 aa29.11■■■□□ 2.25
HMGA2-206ENST00000536545 MVPQ14764 893 aaKnown RBP29.11■■■□□ 2.25
HMGA2-206ENST00000536545 STRCQ7RTU9 1775 aa29.11■■■□□ 2.25
HMGA2-206ENST00000536545 XPCQ01831 940 aaPredicted RBP29.11■■■□□ 2.25
HMGA2-206ENST00000536545 MTHFSDQ2M296 383 aaKnown RBP29.11■■■□□ 2.25
HMGA2-206ENST00000536545 ATF7IPQ6VMQ6 1270 aa29.11■■■□□ 2.25
HMGA2-206ENST00000536545 FTSJ3Q8IY81 847 aaKnown RBP29.09■■■□□ 2.25
HMGA2-206ENST00000536545 TSPYL6Q8N831 410 aa29.09■■■□□ 2.25
HMGA2-206ENST00000536545 NOB1Q9ULX3 412 aaKnown RBP29.09■■■□□ 2.25
HMGA2-206ENST00000536545 ATF3P18847 181 aa29.08■■■□□ 2.25
HMGA2-206ENST00000536545 MCM10Q7L590 875 aa29.08■■■□□ 2.25
HMGA2-206ENST00000536545 GAS2L2Q8NHY3 880 aa29.08■■■□□ 2.25
HMGA2-206ENST00000536545 XIRP1Q702N8 1843 aaKnown RBP29.07■■■□□ 2.24
HMGA2-206ENST00000536545 KRT28Q7Z3Y7 464 aa29.07■■■□□ 2.24
HMGA2-206ENST00000536545 CHL1O00533 1208 aa29.06■■■□□ 2.24
HMGA2-206ENST00000536545 C8orf58Q8NAV2 365 aa29.06■■■□□ 2.24
HMGA2-206ENST00000536545 IPO8O15397 1037 aaKnown RBP29.05■■■□□ 2.24
HMGA2-206ENST00000536545 TWISTNBQ3B726 338 aaPredicted RBP29.05■■■□□ 2.24
HMGA2-206ENST00000536545 SKAP1Q86WV1 359 aa29.05■■■□□ 2.24
HMGA2-206ENST00000536545 IGHDP01880 384 aa29.04■■■□□ 2.24
HMGA2-206ENST00000536545 MRPL50Q8N5N7 158 aaKnown RBP29.04■■■□□ 2.24
HMGA2-206ENST00000536545 LTV1Q96GA3 475 aaPredicted RBP29.04■■■□□ 2.24
HMGA2-206ENST00000536545 GCP02774 474 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms