RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 EXOC6BQ9Y2D4 811 aa19.45■□□□□ 0.7
MCF2L-232ENST00000535094 MCCP23508 829 aa19.45■□□□□ 0.7
MCF2L-232ENST00000535094 MCM10Q7L590 875 aa19.45■□□□□ 0.7
MCF2L-232ENST00000535094 NME9Q86XW9 330 aa19.45■□□□□ 0.7
MCF2L-232ENST00000535094 MRPL50Q8N5N7 158 aaKnown RBP19.45■□□□□ 0.7
MCF2L-232ENST00000535094 ABCC11Q96J66 1382 aa19.45■□□□□ 0.7
MCF2L-232ENST00000535094 COG3Q96JB2 828 aa19.45■□□□□ 0.7
MCF2L-232ENST00000535094 PLEKHF1Q96S99 279 aa19.45■□□□□ 0.7
MCF2L-232ENST00000535094 CHMP3Q9Y3E7 222 aa19.45■□□□□ 0.7
MCF2L-232ENST00000535094 UQCRHLA0A096LP55 91 aa19.44■□□□□ 0.7
MCF2L-232ENST00000535094 F6X3S4 739 aa19.44■□□□□ 0.7
MCF2L-232ENST00000535094 UQCRHP07919 91 aa19.44■□□□□ 0.7
MCF2L-232ENST00000535094 LARP6Q9BRS8 491 aaKnown RBP19.44■□□□□ 0.7
MCF2L-232ENST00000535094 ADGRL1O94910 1474 aa19.44■□□□□ 0.7
MCF2L-232ENST00000535094 DTNBO60941 627 aa19.44■□□□□ 0.7
MCF2L-232ENST00000535094 BCL11BQ9C0K0 894 aaPredicted RBP19.44■□□□□ 0.7
MCF2L-232ENST00000535094 RBSNQ9H1K0 784 aa19.44■□□□□ 0.7
MCF2L-232ENST00000535094 FANCAO15360 1455 aa19.44■□□□□ 0.7
MCF2L-232ENST00000535094 HMMRO75330 724 aa19.43■□□□□ 0.7
MCF2L-232ENST00000535094 SLC4A2P04920 1241 aa19.43■□□□□ 0.7
MCF2L-232ENST00000535094 SDSP20132 328 aa19.43■□□□□ 0.7
MCF2L-232ENST00000535094 LMOD3Q0VAK6 560 aa19.43■□□□□ 0.7
MCF2L-232ENST00000535094 SULT6B1Q6IMI4 303 aa19.43■□□□□ 0.7
MCF2L-232ENST00000535094 PLEKHM2Q8IWE5 1019 aa19.43■□□□□ 0.7
MCF2L-232ENST00000535094 RTF1Q92541 710 aaKnown RBP19.43■□□□□ 0.7
MCF2L-232ENST00000535094 IQGAP3Q86VI3 1631 aa19.43■□□□□ 0.7
MCF2L-232ENST00000535094 MADDQ8WXG6 1647 aa19.42■□□□□ 0.7
MCF2L-232ENST00000535094 GSPT1P15170 499 aaKnown RBP19.42■□□□□ 0.7
MCF2L-232ENST00000535094 ZNF518AQ6AHZ1 1483 aa19.41■□□□□ 0.7
MCF2L-232ENST00000535094 MAP4K4O95819 1239 aaPredicted RBP19.41■□□□□ 0.7
MCF2L-232ENST00000535094 SIRT2Q8IXJ6 389 aa19.41■□□□□ 0.7
MCF2L-232ENST00000535094 KIAA2012Q0VF49 1180 aa19.41■□□□□ 0.7
MCF2L-232ENST00000535094 UNC13BO14795 1591 aa19.41■□□□□ 0.7
MCF2L-232ENST00000535094 POLKQ9UBT6 870 aa19.41■□□□□ 0.7
MCF2L-232ENST00000535094 TTC22Q5TAA0 569 aa19.4■□□□□ 0.7
MCF2L-232ENST00000535094 CFAP44Q96MT7 982 aa19.4■□□□□ 0.7
MCF2L-232ENST00000535094 CLASP1Q7Z460 1538 aa19.4■□□□□ 0.7
MCF2L-232ENST00000535094 MEIS3Q99687 375 aa19.4■□□□□ 0.7
MCF2L-232ENST00000535094 KIF2CQ99661 725 aa19.4■□□□□ 0.7
MCF2L-232ENST00000535094 PRDM10Q9NQV6 1147 aa19.39■□□□□ 0.7
MCF2L-232ENST00000535094 IL16Q14005 1332 aa19.39■□□□□ 0.7
MCF2L-232ENST00000535094 CLTCL1P53675 1640 aa19.39■□□□□ 0.7
MCF2L-232ENST00000535094 OS9Q13438 667 aaPredicted RBP19.39■□□□□ 0.69
MCF2L-232ENST00000535094 ERC2O15083 957 aa19.39■□□□□ 0.69
MCF2L-232ENST00000535094 ZNF830Q96NB3 372 aaPredicted RBP19.39■□□□□ 0.69
MCF2L-232ENST00000535094 FBXO31Q5XUX0 539 aaPredicted RBP19.38■□□□□ 0.69
MCF2L-232ENST00000535094 NCKAP5LQ9HCH0 1330 aa19.38■□□□□ 0.69
MCF2L-232ENST00000535094 ZNF428Q96B54 188 aa19.38■□□□□ 0.69
MCF2L-232ENST00000535094 PPIP5K1Q6PFW1 1433 aa19.37■□□□□ 0.69
MCF2L-232ENST00000535094 FKBP5Q13451 457 aaPredicted RBP19.37■□□□□ 0.69
MCF2L-232ENST00000535094 SYAP1Q96A49 352 aaPredicted RBP19.37■□□□□ 0.69
MCF2L-232ENST00000535094 STK31Q9BXU1 1019 aa19.37■□□□□ 0.69
MCF2L-232ENST00000535094 TXNDC2Q86VQ3 553 aa19.37■□□□□ 0.69
MCF2L-232ENST00000535094 LTV1Q96GA3 475 aaPredicted RBP19.37■□□□□ 0.69
MCF2L-232ENST00000535094 TRPM2O94759 1503 aa19.37■□□□□ 0.69
MCF2L-232ENST00000535094 CD109Q6YHK3 1445 aa19.37■□□□□ 0.69
MCF2L-232ENST00000535094 USP26Q9BXU7 913 aa19.37■□□□□ 0.69
MCF2L-232ENST00000535094 AEBP1Q8IUX7 1158 aa19.36■□□□□ 0.69
MCF2L-232ENST00000535094 IL1RAPL2Q9NP60 686 aa19.36■□□□□ 0.69
MCF2L-232ENST00000535094 KCNJ4P48050 445 aa19.36■□□□□ 0.69
MCF2L-232ENST00000535094 IFT57Q9NWB7 429 aa19.36■□□□□ 0.69
MCF2L-232ENST00000535094 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.35■□□□□ 0.69
MCF2L-232ENST00000535094 PDCL3Q9H2J4 239 aa19.35■□□□□ 0.69
MCF2L-232ENST00000535094 ERCC6L2Q5T890 1561 aa19.35■□□□□ 0.69
MCF2L-232ENST00000535094 CWC22Q9HCG8 908 aaKnown RBP19.35■□□□□ 0.69
MCF2L-232ENST00000535094 LMBRD1Q9NUN5 540 aa19.35■□□□□ 0.69
MCF2L-232ENST00000535094 TSPYL4Q9UJ04 414 aa19.35■□□□□ 0.69
MCF2L-232ENST00000535094 RPGRIP1LQ68CZ1 1315 aa19.34■□□□□ 0.69
MCF2L-232ENST00000535094 LAMC1P11047 1609 aa19.34■□□□□ 0.69
MCF2L-232ENST00000535094 HAP1P54257 671 aaPredicted RBP19.34■□□□□ 0.69
MCF2L-232ENST00000535094 NSD2O96028 1365 aa19.33■□□□□ 0.69
MCF2L-232ENST00000535094 FIBPO43427 364 aa19.33■□□□□ 0.69
MCF2L-232ENST00000535094 OFD1O75665 1012 aa19.33■□□□□ 0.69
MCF2L-232ENST00000535094 TSPY26PQ9H489 355 aa19.33■□□□□ 0.69
MCF2L-232ENST00000535094 CCDC39Q9UFE4 941 aa19.33■□□□□ 0.69
MCF2L-232ENST00000535094 FAM177BA6PVY3 158 aa19.33■□□□□ 0.68
MCF2L-232ENST00000535094 DDX54Q8TDD1 881 aaKnown RBP19.33■□□□□ 0.68
MCF2L-232ENST00000535094 TMX3Q96JJ7 454 aa19.32■□□□□ 0.68
MCF2L-232ENST00000535094 DCTPP1Q9H773 170 aa19.32■□□□□ 0.68
MCF2L-232ENST00000535094 TMEM63CQ9P1W3 806 aa19.32■□□□□ 0.68
MCF2L-232ENST00000535094 TAOK2Q9UL54 1235 aa19.32■□□□□ 0.68
MCF2L-232ENST00000535094 ZMYM3Q14202 1370 aa19.31■□□□□ 0.68
MCF2L-232ENST00000535094 DRC7Q8IY82 874 aa19.31■□□□□ 0.68
MCF2L-232ENST00000535094 NSFL1CQ9UNZ2 370 aaKnown RBP19.31■□□□□ 0.68
MCF2L-232ENST00000535094 USP25Q9UHP3 1055 aa19.31■□□□□ 0.68
MCF2L-232ENST00000535094 RPAP2Q8IXW5 612 aaPredicted RBP19.3■□□□□ 0.68
MCF2L-232ENST00000535094 GPT2Q8TD30 523 aa19.3■□□□□ 0.68
MCF2L-232ENST00000535094 TSC1Q92574 1164 aa19.3■□□□□ 0.68
MCF2L-232ENST00000535094 ARHGAP45Q92619 1136 aa19.3■□□□□ 0.68
MCF2L-232ENST00000535094 MBD3O95983 291 aa19.3■□□□□ 0.68
MCF2L-232ENST00000535094 SPC24Q8NBT2 197 aa19.3■□□□□ 0.68
MCF2L-232ENST00000535094 SBNO2Q9Y2G9 1366 aa19.3■□□□□ 0.68
MCF2L-232ENST00000535094 CSPP1Q1MSJ5 1256 aa19.29■□□□□ 0.68
MCF2L-232ENST00000535094 EIF2S2P20042 333 aaKnown RBP19.29■□□□□ 0.68
MCF2L-232ENST00000535094 CEP85Q6P2H3 762 aa19.28■□□□□ 0.68
MCF2L-232ENST00000535094 ANKRD44Q8N8A2 993 aa19.28■□□□□ 0.68
MCF2L-232ENST00000535094 IQGAP1P46940 1657 aa19.28■□□□□ 0.68
MCF2L-232ENST00000535094 RTEL1-TNFRSF6BF6WH68 1400 aa19.28■□□□□ 0.68
MCF2L-232ENST00000535094 VPS37CA5D8V6 355 aaPredicted RBP19.28■□□□□ 0.68
MCF2L-232ENST00000535094 NUTM1Q86Y26 1132 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms