RNA–Protein interactions for RNA: ENST00000534579.5

CTNND1-237, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 6,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-237ENST00000534579 TSR2Q969E8 191 aaKnown RBP10.59□□□□□ -0.71
CTNND1-237ENST00000534579 ASXL2Q76L83 1435 aa10.59□□□□□ -0.71
CTNND1-237ENST00000534579 TMEM87AQ8NBN3 555 aa10.59□□□□□ -0.71
CTNND1-237ENST00000534579 AMOTL2Q9Y2J4 779 aa10.59□□□□□ -0.71
CTNND1-237ENST00000534579 HDGFL1Q5TGJ6 251 aa10.59□□□□□ -0.71
CTNND1-237ENST00000534579 RNF20Q5VTR2 975 aa10.59□□□□□ -0.71
CTNND1-237ENST00000534579 WDR97A6NE52 1622 aa10.58□□□□□ -0.72
CTNND1-237ENST00000534579 ZRSR2Q15696 482 aaKnown RBP10.58□□□□□ -0.72
CTNND1-237ENST00000534579 XBP1P17861 261 aa10.58□□□□□ -0.72
CTNND1-237ENST00000534579 RALYLQ86SE5 291 aaKnown RBP10.58□□□□□ -0.72
CTNND1-237ENST00000534579 ANKRD62A6NC57 917 aa10.58□□□□□ -0.72
CTNND1-237ENST00000534579 CAGE1Q8TC20 777 aa10.58□□□□□ -0.72
CTNND1-237ENST00000534579 MYO6Q9UM54 1294 aa10.58□□□□□ -0.72
CTNND1-237ENST00000534579 ADGRF5Q8IZF2 1346 aa10.58□□□□□ -0.72
CTNND1-237ENST00000534579 GNAI3P08754 354 aa10.57□□□□□ -0.72
CTNND1-237ENST00000534579 PNISRQ8TF01 805 aaKnown RBP10.57□□□□□ -0.72
CTNND1-237ENST00000534579 DHX29Q7Z478 1369 aaKnown RBP10.57□□□□□ -0.72
CTNND1-237ENST00000534579 MATR3P43243 847 aaKnown RBP eCLIP10.57□□□□□ -0.726e-7■■■■□ 22.1
CTNND1-237ENST00000534579 KCNH5Q8NCM2 988 aa10.57□□□□□ -0.72
CTNND1-237ENST00000534579 PDCL3Q9H2J4 239 aa10.57□□□□□ -0.72
CTNND1-237ENST00000534579 PPP6R1Q9UPN7 881 aa10.57□□□□□ -0.72
CTNND1-237ENST00000534579 SLC3A2P08195 630 aaKnown RBP10.57□□□□□ -0.72
CTNND1-237ENST00000534579 NEFHP12036 1026 aa10.57□□□□□ -0.72
CTNND1-237ENST00000534579 SLC4A2P04920 1241 aa10.56□□□□□ -0.72
CTNND1-237ENST00000534579 MAP7D2Q96T17 732 aa10.56□□□□□ -0.72
CTNND1-237ENST00000534579 ATP10BO94823 1461 aa10.56□□□□□ -0.72
CTNND1-237ENST00000534579 GPATCH8Q9UKJ3 1502 aaKnown RBP10.56□□□□□ -0.72
CTNND1-237ENST00000534579 DDX11L8A8MPP1 907 aa10.56□□□□□ -0.72
CTNND1-237ENST00000534579 SURF6O75683 361 aaKnown RBP10.55□□□□□ -0.72
CTNND1-237ENST00000534579 INTS3Q68E01 1043 aaKnown RBP10.55□□□□□ -0.72
CTNND1-237ENST00000534579 ZNF771Q7L3S4 317 aaPredicted RBP10.55□□□□□ -0.72
CTNND1-237ENST00000534579 NOS1P29475 1434 aa10.55□□□□□ -0.72
CTNND1-237ENST00000534579 TEX35Q5T0J7 233 aa10.55□□□□□ -0.72
CTNND1-237ENST00000534579 OLFM4Q6UX06 510 aa10.55□□□□□ -0.72
CTNND1-237ENST00000534579 TEX14Q8IWB6 1497 aa10.55□□□□□ -0.72
CTNND1-237ENST00000534579 MYCNP04198 464 aaPredicted RBP10.55□□□□□ -0.72
CTNND1-237ENST00000534579 MYL6BP14649 208 aa10.55□□□□□ -0.72
CTNND1-237ENST00000534579 AAMPQ13685 434 aa10.55□□□□□ -0.72
CTNND1-237ENST00000534579 PDILTQ8N807 584 aa10.55□□□□□ -0.72
CTNND1-237ENST00000534579 KIF21AQ7Z4S6 1674 aa10.55□□□□□ -0.72
CTNND1-237ENST00000534579 CHMP4BP1P59074 171 aa10.55□□□□□ -0.72
CTNND1-237ENST00000534579 IL27Q8NEV9 243 aa10.55□□□□□ -0.72
CTNND1-237ENST00000534579 ZNF428Q96B54 188 aa10.54□□□□□ -0.72
CTNND1-237ENST00000534579 NOB1Q9ULX3 412 aaKnown RBP10.54□□□□□ -0.72
CTNND1-237ENST00000534579 PHF8Q9UPP1 1060 aa10.54□□□□□ -0.72
CTNND1-237ENST00000534579 FOXO3O43524 673 aa10.54□□□□□ -0.72
CTNND1-237ENST00000534579 TTLL5Q6EMB2 1281 aa10.54□□□□□ -0.72
CTNND1-237ENST00000534579 KDM5BQ9UGL1 1544 aa10.54□□□□□ -0.72
CTNND1-237ENST00000534579 WDHD1O75717 1129 aaPredicted RBP10.54□□□□□ -0.72
CTNND1-237ENST00000534579 DCTN1Q14203 1278 aa10.54□□□□□ -0.72
CTNND1-237ENST00000534579 CLASRPQ8N2M8 674 aaKnown RBP10.54□□□□□ -0.72
CTNND1-237ENST00000534579 PLCH2O75038 1416 aa10.54□□□□□ -0.72
CTNND1-237ENST00000534579 BTBD11A6QL63 1104 aa10.54□□□□□ -0.72
CTNND1-237ENST00000534579 ANKRD18AQ8IVF6 992 aa10.54□□□□□ -0.72
CTNND1-237ENST00000534579 TBC1D2BQ9UPU7 963 aa10.54□□□□□ -0.72
CTNND1-237ENST00000534579 DDX49Q9Y6V7 483 aaKnown RBP10.54□□□□□ -0.72
CTNND1-237ENST00000534579 SASS6Q6UVJ0 657 aa10.54□□□□□ -0.72
CTNND1-237ENST00000534579 ACBD3Q9H3P7 528 aa10.53□□□□□ -0.72
CTNND1-237ENST00000534579 C1orf115Q9H7X2 142 aa10.53□□□□□ -0.72
CTNND1-237ENST00000534579 CTTNBP2Q8WZ74 1663 aa10.53□□□□□ -0.72
CTNND1-237ENST00000534579 VPS37CA5D8V6 355 aaPredicted RBP10.53□□□□□ -0.72
CTNND1-237ENST00000534579 WASLO00401 505 aaPredicted RBP10.53□□□□□ -0.72
CTNND1-237ENST00000534579 FCHSD2O94868 740 aa10.53□□□□□ -0.72
CTNND1-237ENST00000534579 NME9Q86XW9 330 aa10.53□□□□□ -0.72
CTNND1-237ENST00000534579 CCDC191Q8NCU4 936 aa10.53□□□□□ -0.72
CTNND1-237ENST00000534579 TNRQ92752 1358 aa10.53□□□□□ -0.72
CTNND1-237ENST00000534579 ADAMTS12P58397 1594 aa10.53□□□□□ -0.72
CTNND1-237ENST00000534579 SART3Q15020 963 aaKnown RBP10.53□□□□□ -0.72
CTNND1-237ENST00000534579 WDR7Q9Y4E6 1490 aa10.53□□□□□ -0.72
CTNND1-237ENST00000534579 MAGEC2Q9UBF1 373 aaPredicted RBP10.53□□□□□ -0.72
CTNND1-237ENST00000534579 SEPT7Q16181 437 aaKnown RBP10.52□□□□□ -0.72
CTNND1-237ENST00000534579 WDR63Q8IWG1 891 aa10.52□□□□□ -0.72
CTNND1-237ENST00000534579 CNNM1Q9NRU3 951 aa10.52□□□□□ -0.72
CTNND1-237ENST00000534579 GNAI2P04899 355 aa10.52□□□□□ -0.73
CTNND1-237ENST00000534579 NINLQ9Y2I6 1382 aa10.52□□□□□ -0.73
CTNND1-237ENST00000534579 NFKBIBQ15653 356 aa10.52□□□□□ -0.73
CTNND1-237ENST00000534579 FSD1Q9BTV5 496 aa10.52□□□□□ -0.73
CTNND1-237ENST00000534579 NUP153P49790 1475 aaKnown RBP10.52□□□□□ -0.73
CTNND1-237ENST00000534579 ADAMTS2O95450 1211 aa10.52□□□□□ -0.73
CTNND1-237ENST00000534579 TRIM21P19474 475 aaKnown RBP10.52□□□□□ -0.73
CTNND1-237ENST00000534579 DNAJC2Q99543 621 aaKnown RBP10.52□□□□□ -0.73
CTNND1-237ENST00000534579 DESP17661 470 aa10.52□□□□□ -0.73
CTNND1-237ENST00000534579 CCDC73Q6ZRK6 1079 aa10.52□□□□□ -0.73
CTNND1-237ENST00000534579 GNAT3A8MTJ3 354 aa10.51□□□□□ -0.73
CTNND1-237ENST00000534579 BCAR3O75815 825 aa10.51□□□□□ -0.73
CTNND1-237ENST00000534579 CNTROBQ8N137 903 aa10.51□□□□□ -0.73
CTNND1-237ENST00000534579 ZHX3Q9H4I2 956 aa10.51□□□□□ -0.73
CTNND1-237ENST00000534579 ITSN2Q9NZM3 1697 aa10.51□□□□□ -0.73
CTNND1-237ENST00000534579 SYCP2Q9BX26 1530 aa10.51□□□□□ -0.73
CTNND1-237ENST00000534579 NFE2L2Q16236 605 aa10.51□□□□□ -0.73
CTNND1-237ENST00000534579 MNS1Q8NEH6 495 aa10.51□□□□□ -0.73
CTNND1-237ENST00000534579 CCT4P50991 539 aaKnown RBP10.5□□□□□ -0.73
CTNND1-237ENST00000534579 SCLT1Q96NL6 688 aa10.5□□□□□ -0.73
CTNND1-237ENST00000534579 SRCIN1Q9C0H9 1055 aa10.5□□□□□ -0.73
CTNND1-237ENST00000534579 EIF4G3O43432 1585 aaKnown RBP10.5□□□□□ -0.73
CTNND1-237ENST00000534579 ZSCAN29Q8IWY8 852 aaPredicted RBP10.5□□□□□ -0.73
CTNND1-237ENST00000534579 USHBP1Q8N6Y0 703 aa10.5□□□□□ -0.73
CTNND1-237ENST00000534579 PLCD4Q9BRC7 762 aa10.5□□□□□ -0.73
CTNND1-237ENST00000534579 GNL3LQ9NVN8 582 aaKnown RBP10.5□□□□□ -0.73
CTNND1-237ENST00000534579 BRPF3Q9ULD4 1205 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms