RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 EIF4A2Q14240 407 aaKnown RBP20.18■□□□□ 0.82
ATP2C1-224ENST00000533801 IQSEC2Q5JU85 1478 aa20.18■□□□□ 0.82
ATP2C1-224ENST00000533801 GNAI1P63096 354 aa20.16■□□□□ 0.82
ATP2C1-224ENST00000533801 ZNF692Q9BU19 519 aaPredicted RBP20.16■□□□□ 0.82
ATP2C1-224ENST00000533801 ANKRD45Q5TZF3 282 aa20.15■□□□□ 0.82
ATP2C1-224ENST00000533801 SLC4A10Q6U841 1118 aa20.15■□□□□ 0.82
ATP2C1-224ENST00000533801 USHBP1Q8N6Y0 703 aa20.14■□□□□ 0.82
ATP2C1-224ENST00000533801 ARXQ96QS3 562 aa20.14■□□□□ 0.82
ATP2C1-224ENST00000533801 KCNA6P17658 529 aa20.14■□□□□ 0.81
ATP2C1-224ENST00000533801 KIF16BQ96L93 1317 aa20.14■□□□□ 0.81
ATP2C1-224ENST00000533801 RTF1Q92541 710 aaKnown RBP20.13■□□□□ 0.81
ATP2C1-224ENST00000533801 EDC4Q6P2E9 1401 aaKnown RBP20.12■□□□□ 0.81
ATP2C1-224ENST00000533801 ABTB2Q8N961 1025 aa20.12■□□□□ 0.81
ATP2C1-224ENST00000533801 THEMISQ8N1K5 641 aaPredicted RBP20.12■□□□□ 0.81
ATP2C1-224ENST00000533801 NLRP1Q9C000 1473 aa20.11■□□□□ 0.81
ATP2C1-224ENST00000533801 CPS1P31327 1500 aa20.11■□□□□ 0.81
ATP2C1-224ENST00000533801 VAMP4O75379 141 aa20.11■□□□□ 0.81
ATP2C1-224ENST00000533801 CALD1Q05682 793 aaKnown RBP20.11■□□□□ 0.81
ATP2C1-224ENST00000533801 LRRC7Q96NW7 1537 aa20.09■□□□□ 0.81
ATP2C1-224ENST00000533801 LMOD3Q0VAK6 560 aa20.08■□□□□ 0.81
ATP2C1-224ENST00000533801 SPATA31D1Q6ZQQ2 1576 aa20.08■□□□□ 0.8
ATP2C1-224ENST00000533801 MAP3K19Q56UN5 1328 aa20.07■□□□□ 0.8
ATP2C1-224ENST00000533801 ZNF428Q96B54 188 aa20.07■□□□□ 0.8
ATP2C1-224ENST00000533801 AGLP35573 1532 aa20.07■□□□□ 0.8
ATP2C1-224ENST00000533801 COL3A1P02461 1466 aaPredicted RBP20.07■□□□□ 0.8
ATP2C1-224ENST00000533801 TSPYL4Q9UJ04 414 aa20.06■□□□□ 0.8
ATP2C1-224ENST00000533801 MAP2P11137 1827 aaKnown RBP20.06■□□□□ 0.8
ATP2C1-224ENST00000533801 PNPLA6Q8IY17 1366 aa20.06■□□□□ 0.8
ATP2C1-224ENST00000533801 CT47B1P0C2W7 299 aaPredicted RBP20.06■□□□□ 0.8
ATP2C1-224ENST00000533801 ESCO1Q5FWF5 840 aa20.06■□□□□ 0.8
ATP2C1-224ENST00000533801 IFT57Q9NWB7 429 aa20.06■□□□□ 0.8
ATP2C1-224ENST00000533801 CFAP44Q96MT7 982 aa20.05■□□□□ 0.8
ATP2C1-224ENST00000533801 ATP7BP35670 1465 aa20.05■□□□□ 0.8
ATP2C1-224ENST00000533801 IL16Q14005 1332 aa20.05■□□□□ 0.8
ATP2C1-224ENST00000533801 MRPL50Q8N5N7 158 aaKnown RBP20.05■□□□□ 0.8
ATP2C1-224ENST00000533801 F6X3S4 739 aa20.04■□□□□ 0.8
ATP2C1-224ENST00000533801 NFKBIBQ15653 356 aa20.04■□□□□ 0.8
ATP2C1-224ENST00000533801 ZBTB40Q9NUA8 1239 aa20.04■□□□□ 0.8
ATP2C1-224ENST00000533801 CPSF1Q10570 1443 aaKnown RBP20.03■□□□□ 0.8
ATP2C1-224ENST00000533801 FRAT2O75474 233 aaPredicted RBP20.03■□□□□ 0.8
ATP2C1-224ENST00000533801 SLC4A2P04920 1241 aa20.03■□□□□ 0.8
ATP2C1-224ENST00000533801 FAM135BQ49AJ0 1406 aa20.03■□□□□ 0.8
ATP2C1-224ENST00000533801 ADAMTS13Q76LX8 1427 aa20.02■□□□□ 0.8
ATP2C1-224ENST00000533801 MTHFSDQ2M296 383 aaKnown RBP20.02■□□□□ 0.8
ATP2C1-224ENST00000533801 FOXD4L1Q9NU39 408 aa20.02■□□□□ 0.8
ATP2C1-224ENST00000533801 USP32Q8NFA0 1604 aa20.02■□□□□ 0.8
ATP2C1-224ENST00000533801 BECN1Q14457 450 aa20.01■□□□□ 0.79
ATP2C1-224ENST00000533801 PSME1Q06323 249 aa20.01■□□□□ 0.79
ATP2C1-224ENST00000533801 ALDH1L2Q3SY69 923 aa20.01■□□□□ 0.79
ATP2C1-224ENST00000533801 EYA1Q99502 592 aa20■□□□□ 0.79
ATP2C1-224ENST00000533801 PTPRUQ92729 1446 aa20■□□□□ 0.79
ATP2C1-224ENST00000533801 EIF2S2P20042 333 aaKnown RBP19.98■□□□□ 0.79
ATP2C1-224ENST00000533801 KIF13AQ9H1H9 1805 aa19.98■□□□□ 0.79
ATP2C1-224ENST00000533801 SETD1BQ9UPS6 1966 aaKnown RBP19.98■□□□□ 0.79
ATP2C1-224ENST00000533801 CHD1LQ86WJ1 897 aa19.98■□□□□ 0.79
ATP2C1-224ENST00000533801 SMARCA5O60264 1052 aaPredicted RBP19.97■□□□□ 0.79
ATP2C1-224ENST00000533801 RTN4Q9NQC3 1192 aaKnown RBP19.97■□□□□ 0.79
ATP2C1-224ENST00000533801 PLEKHG3A1L390 1219 aa19.97■□□□□ 0.79
ATP2C1-224ENST00000533801 C22orf23Q9BZE7 217 aa19.97■□□□□ 0.79
ATP2C1-224ENST00000533801 PLEKHG1Q9ULL1 1385 aa19.97■□□□□ 0.79
ATP2C1-224ENST00000533801 ZBTB7BO15156 539 aaPredicted RBP19.96■□□□□ 0.79
ATP2C1-224ENST00000533801 API5Q9BZZ5 524 aaKnown RBP19.96■□□□□ 0.79
ATP2C1-224ENST00000533801 USP19O94966 1318 aa19.96■□□□□ 0.79
ATP2C1-224ENST00000533801 TBX22Q9Y458 520 aa19.96■□□□□ 0.79
ATP2C1-224ENST00000533801 G2E3Q7L622 706 aa19.95■□□□□ 0.78
ATP2C1-224ENST00000533801 MED14O60244 1454 aa19.95■□□□□ 0.78
ATP2C1-224ENST00000533801 C16orf71Q8IYS4 520 aaPredicted RBP19.95■□□□□ 0.78
ATP2C1-224ENST00000533801 USP6P35125 1406 aa19.95■□□□□ 0.78
ATP2C1-224ENST00000533801 KIF20BQ96Q89 1820 aa19.95■□□□□ 0.78
ATP2C1-224ENST00000533801 HSP90AA1P07900 732 aaKnown RBP19.95■□□□□ 0.78
ATP2C1-224ENST00000533801 HDAC1Q13547 482 aaPredicted RBP19.94■□□□□ 0.78
ATP2C1-224ENST00000533801 AAMPQ13685 434 aa19.94■□□□□ 0.78
ATP2C1-224ENST00000533801 ANKLE2Q86XL3 938 aa19.94■□□□□ 0.78
ATP2C1-224ENST00000533801 DLC1Q96QB1 1528 aa19.94■□□□□ 0.78
ATP2C1-224ENST00000533801 FKBP5Q13451 457 aaPredicted RBP19.94■□□□□ 0.78
ATP2C1-224ENST00000533801 NRXN3Q9Y4C0 1643 aa19.94■□□□□ 0.78
ATP2C1-224ENST00000533801 ADGRB2O60241 1585 aa19.93■□□□□ 0.78
ATP2C1-224ENST00000533801 MEIS3Q99687 375 aa19.93■□□□□ 0.78
ATP2C1-224ENST00000533801 PHF8Q9UPP1 1060 aa19.93■□□□□ 0.78
ATP2C1-224ENST00000533801 STK31Q9BXU1 1019 aa19.92■□□□□ 0.78
ATP2C1-224ENST00000533801 LRRC59Q96AG4 307 aaKnown RBP19.92■□□□□ 0.78
ATP2C1-224ENST00000533801 ZNF853P0CG23 659 aa19.91■□□□□ 0.78
ATP2C1-224ENST00000533801 SMC5Q8IY18 1101 aa19.91■□□□□ 0.78
ATP2C1-224ENST00000533801 AATKQ6ZMQ8 1374 aa19.91■□□□□ 0.78
ATP2C1-224ENST00000533801 SIRT1Q96EB6 747 aa19.91■□□□□ 0.78
ATP2C1-224ENST00000533801 CDK12Q9NYV4 1490 aaPredicted RBP19.91■□□□□ 0.78
ATP2C1-224ENST00000533801 SIRT2Q8IXJ6 389 aa19.9■□□□□ 0.78
ATP2C1-224ENST00000533801 ORAI2Q96SN7 254 aa19.9■□□□□ 0.78
ATP2C1-224ENST00000533801 TBC1D2Q9BYX2 928 aa19.9■□□□□ 0.78
ATP2C1-224ENST00000533801 ANXA1P04083 346 aa19.9■□□□□ 0.78
ATP2C1-224ENST00000533801 NUCB1Q02818 461 aa19.9■□□□□ 0.78
ATP2C1-224ENST00000533801 TSHZ3Q63HK5 1081 aa19.9■□□□□ 0.78
ATP2C1-224ENST00000533801 OTUD7AQ8TE49 926 aaPredicted RBP19.9■□□□□ 0.78
ATP2C1-224ENST00000533801 CDC42BPGQ6DT37 1551 aa19.9■□□□□ 0.78
ATP2C1-224ENST00000533801 TBC1D32Q96NH3 1257 aa19.89■□□□□ 0.77
ATP2C1-224ENST00000533801 GZF1Q9H116 711 aaPredicted RBP19.88■□□□□ 0.77
ATP2C1-224ENST00000533801 HOXC9P31274 260 aa19.88■□□□□ 0.77
ATP2C1-224ENST00000533801 REREQ9P2R6 1566 aa19.88■□□□□ 0.77
ATP2C1-224ENST00000533801 DDX17Q92841 729 aaKnown RBP19.87■□□□□ 0.77
ATP2C1-224ENST00000533801 CHL1O00533 1208 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms