RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 NEFMP07197 916 aa15.41■□□□□ 0.06
CLP1-205ENST00000533682 SULT6B1Q6IMI4 303 aa15.41■□□□□ 0.06
CLP1-205ENST00000533682 DCTN1Q14203 1278 aa15.41■□□□□ 0.06
CLP1-205ENST00000533682 PEAK1Q9H792 1746 aa15.4■□□□□ 0.06
CLP1-205ENST00000533682 IGHDP01880 384 aa15.4■□□□□ 0.06
CLP1-205ENST00000533682 SSH1Q8WYL5 1049 aa15.4■□□□□ 0.06
CLP1-205ENST00000533682 CHD2O14647 1828 aaKnown RBP15.4■□□□□ 0.06
CLP1-205ENST00000533682 MAP3K19Q56UN5 1328 aa15.4■□□□□ 0.06
CLP1-205ENST00000533682 DLG5Q8TDM6 1919 aa15.39■□□□□ 0.05
CLP1-205ENST00000533682 PAK3O75914 559 aaPredicted RBP15.39■□□□□ 0.05
CLP1-205ENST00000533682 NLRP6P59044 892 aa15.39■□□□□ 0.05
CLP1-205ENST00000533682 SMC4Q9NTJ3 1288 aa15.38■□□□□ 0.05
CLP1-205ENST00000533682 PIK3R4Q99570 1358 aa15.38■□□□□ 0.05
CLP1-205ENST00000533682 IL16Q14005 1332 aa15.38■□□□□ 0.05
CLP1-205ENST00000533682 USP31Q70CQ4 1352 aa15.38■□□□□ 0.05
CLP1-205ENST00000533682 ELL2O00472 640 aaPredicted RBP15.37■□□□□ 0.05
CLP1-205ENST00000533682 CENPQQ7L2Z9 268 aaPredicted RBP15.37■□□□□ 0.05
CLP1-205ENST00000533682 TCERG1O14776 1098 aaKnown RBP15.37■□□□□ 0.05
CLP1-205ENST00000533682 ZNF142P52746 1687 aaPredicted RBP15.37■□□□□ 0.05
CLP1-205ENST00000533682 NALCNQ8IZF0 1738 aa15.37■□□□□ 0.05
CLP1-205ENST00000533682 TTC21AQ8NDW8 1320 aa15.37■□□□□ 0.05
CLP1-205ENST00000533682 TSPYL6Q8N831 410 aa15.36■□□□□ 0.05
CLP1-205ENST00000533682 C14orf37Q86TY3 774 aa15.36■□□□□ 0.05
CLP1-205ENST00000533682 ABTB2Q8N961 1025 aa15.36■□□□□ 0.05
CLP1-205ENST00000533682 PIK3C2AO00443 1686 aa15.36■□□□□ 0.05
CLP1-205ENST00000533682 FMN2Q9NZ56 1722 aa15.35■□□□□ 0.05
CLP1-205ENST00000533682 PDE4AP27815 886 aa15.35■□□□□ 0.05
CLP1-205ENST00000533682 NOB1Q9ULX3 412 aaKnown RBP15.35■□□□□ 0.05
CLP1-205ENST00000533682 PCDHB15Q9Y5E8 787 aa15.35■□□□□ 0.05
CLP1-205ENST00000533682 PLEKHG5O94827 1062 aa15.34■□□□□ 0.05
CLP1-205ENST00000533682 TRIM27P14373 513 aa15.34■□□□□ 0.05
CLP1-205ENST00000533682 MBIPQ9NS73 344 aa15.34■□□□□ 0.05
CLP1-205ENST00000533682 RGS3P49796 1198 aa15.34■□□□□ 0.05
CLP1-205ENST00000533682 ESCO1Q5FWF5 840 aa15.34■□□□□ 0.05
CLP1-205ENST00000533682 ZKSCAN2Q63HK3 967 aa15.34■□□□□ 0.05
CLP1-205ENST00000533682 PHF8Q9UPP1 1060 aa15.34■□□□□ 0.05
CLP1-205ENST00000533682 AMPHP49418 695 aa15.33■□□□□ 0.04
CLP1-205ENST00000533682 NPHP4O75161 1426 aaPredicted RBP15.33■□□□□ 0.04
CLP1-205ENST00000533682 ANKARQ7Z5J8 1434 aa15.33■□□□□ 0.04
CLP1-205ENST00000533682 FOXO3O43524 673 aa15.33■□□□□ 0.04
CLP1-205ENST00000533682 CT47B1P0C2W7 299 aaPredicted RBP15.33■□□□□ 0.04
CLP1-205ENST00000533682 MCM10Q7L590 875 aa15.33■□□□□ 0.04
CLP1-205ENST00000533682 XPCQ01831 940 aaPredicted RBP15.32■□□□□ 0.04
CLP1-205ENST00000533682 FTSJ3Q8IY81 847 aaKnown RBP15.32■□□□□ 0.04
CLP1-205ENST00000533682 DZIP1LQ8IYY4 767 aaKnown RBP15.32■□□□□ 0.04
CLP1-205ENST00000533682 ZNF853P0CG23 659 aa15.32■□□□□ 0.04
CLP1-205ENST00000533682 ORAI2Q96SN7 254 aa15.32■□□□□ 0.04
CLP1-205ENST00000533682 DEKP35659 375 aaKnown RBP15.31■□□□□ 0.04
CLP1-205ENST00000533682 BACH2Q9BYV9 841 aa15.31■□□□□ 0.04
CLP1-205ENST00000533682 VAMP4O75379 141 aa15.31■□□□□ 0.04
CLP1-205ENST00000533682 MVPQ14764 893 aaKnown RBP15.31■□□□□ 0.04
CLP1-205ENST00000533682 C8orf58Q8NAV2 365 aa15.31■□□□□ 0.04
CLP1-205ENST00000533682 LTV1Q96GA3 475 aaPredicted RBP15.31■□□□□ 0.04
CLP1-205ENST00000533682 EYA1Q99502 592 aa15.31■□□□□ 0.04
CLP1-205ENST00000533682 ANO8Q9HCE9 1232 aaPredicted RBP15.31■□□□□ 0.04
CLP1-205ENST00000533682 KRT24Q2M2I5 525 aa15.3■□□□□ 0.04
CLP1-205ENST00000533682 ATF7IPQ6VMQ6 1270 aa15.3■□□□□ 0.04
CLP1-205ENST00000533682 IFT57Q9NWB7 429 aa15.3■□□□□ 0.04
CLP1-205ENST00000533682 MARF1Q9Y4F3 1742 aaKnown RBP15.3■□□□□ 0.04
CLP1-205ENST00000533682 MS4A1P11836 297 aa15.29■□□□□ 0.04
CLP1-205ENST00000533682 GNAI1P63096 354 aa15.29■□□□□ 0.04
CLP1-205ENST00000533682 FLT4P35916 1363 aa15.29■□□□□ 0.04
CLP1-205ENST00000533682 NPM2Q86SE8 214 aaKnown RBP15.29■□□□□ 0.04
CLP1-205ENST00000533682 CFAP44Q96MT7 982 aa15.29■□□□□ 0.04
CLP1-205ENST00000533682 SBNO1A3KN83 1393 aa15.29■□□□□ 0.04
CLP1-205ENST00000533682 RGPD1P0DJD0 1748 aa15.28■□□□□ 0.04
CLP1-205ENST00000533682 PSME1Q06323 249 aa15.28■□□□□ 0.04
CLP1-205ENST00000533682 ITPRIPQ8IWB1 547 aa15.28■□□□□ 0.04
CLP1-205ENST00000533682 TMEM57Q8N5G2 664 aa15.28■□□□□ 0.04
CLP1-205ENST00000533682 MIS18AQ9NYP9 233 aa15.28■□□□□ 0.04
CLP1-205ENST00000533682 ADGRL3Q9HAR2 1447 aa15.27■□□□□ 0.04
CLP1-205ENST00000533682 HOXC9P31274 260 aa15.27■□□□□ 0.04
CLP1-205ENST00000533682 MTHFSDQ2M296 383 aaKnown RBP15.27■□□□□ 0.04
CLP1-205ENST00000533682 CALD1Q05682 793 aaKnown RBP15.27■□□□□ 0.03
CLP1-205ENST00000533682 ZBTB7CA1YPR0 619 aa15.26■□□□□ 0.03
CLP1-205ENST00000533682 LMOD3Q0VAK6 560 aa15.26■□□□□ 0.03
CLP1-205ENST00000533682 TWISTNBQ3B726 338 aaPredicted RBP15.26■□□□□ 0.03
CLP1-205ENST00000533682 PROSER2Q86WR7 435 aaPredicted RBP15.26■□□□□ 0.03
CLP1-205ENST00000533682 ALDH1L2Q3SY69 923 aa15.25■□□□□ 0.03
CLP1-205ENST00000533682 USHBP1Q8N6Y0 703 aa15.25■□□□□ 0.03
CLP1-205ENST00000533682 HSPA2P54652 639 aa15.25■□□□□ 0.03
CLP1-205ENST00000533682 MRPL50Q8N5N7 158 aaKnown RBP15.25■□□□□ 0.03
CLP1-205ENST00000533682 IGSF1Q8N6C5 1336 aa15.24■□□□□ 0.03
CLP1-205ENST00000533682 LMOD2Q6P5Q4 547 aa15.24■□□□□ 0.03
CLP1-205ENST00000533682 ARHGEF10O15013 1369 aa15.24■□□□□ 0.03
CLP1-205ENST00000533682 KIF16BQ96L93 1317 aa15.23■□□□□ 0.03
CLP1-205ENST00000533682 IPO8O15397 1037 aaKnown RBP15.22■□□□□ 0.03
CLP1-205ENST00000533682 KDRP35968 1356 aa15.22■□□□□ 0.03
CLP1-205ENST00000533682 CHL1O00533 1208 aa15.22■□□□□ 0.03
CLP1-205ENST00000533682 C8orf34Q49A92 452 aa15.22■□□□□ 0.03
CLP1-205ENST00000533682 ANP32AP39687 249 aaKnown RBP15.21■□□□□ 0.03
CLP1-205ENST00000533682 DDX17Q92841 729 aaKnown RBP15.21■□□□□ 0.03
CLP1-205ENST00000533682 DDX19BQ9UMR2 479 aa15.21■□□□□ 0.03
CLP1-205ENST00000533682 LTN1O94822 1766 aa15.2■□□□□ 0.02
CLP1-205ENST00000533682 ZBTB40Q9NUA8 1239 aa15.2■□□□□ 0.02
CLP1-205ENST00000533682 PDZRN3Q9UPQ7 1066 aa15.19■□□□□ 0.02
CLP1-205ENST00000533682 NWD1Q149M9 1564 aa15.19■□□□□ 0.02
CLP1-205ENST00000533682 CRB1P82279 1406 aa15.19■□□□□ 0.02
CLP1-205ENST00000533682 BRPF1P55201 1214 aaPredicted RBP15.19■□□□□ 0.02
CLP1-205ENST00000533682 AAMPQ13685 434 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms