RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 NUTM2AQ8IVF1 878 aaPredicted RBP15.09■□□□□ 0.01
RAD50-209ENST00000533482 BTBD11A6QL63 1104 aa15.09■□□□□ 0.01
RAD50-209ENST00000533482 CAVIN1Q6NZI2 390 aaKnown RBP15.09■□□□□ 0.01
RAD50-209ENST00000533482 SRCIN1Q9C0H9 1055 aa15.08■□□□□ 0.01
RAD50-209ENST00000533482 PTCD1O75127 700 aaKnown RBP15.08■□□□□ 0
RAD50-209ENST00000533482 GNAT3A8MTJ3 354 aa15.08■□□□□ 0
RAD50-209ENST00000533482 H3BQV1 296 aa15.08■□□□□ 0
RAD50-209ENST00000533482 IFFO2Q5TF58 517 aa15.08■□□□□ 0
RAD50-209ENST00000533482 DNMT1P26358 1616 aaKnown RBP15.08■□□□□ 0
RAD50-209ENST00000533482 CCDC85AQ96PX6 553 aaPredicted RBP15.08■□□□□ 0
RAD50-209ENST00000533482 TBC1D2Q9BYX2 928 aa15.08■□□□□ 0
RAD50-209ENST00000533482 SRGAP3O43295 1099 aa15.07■□□□□ 0
RAD50-209ENST00000533482 PRPF40AO75400 957 aaKnown RBP15.07■□□□□ 0
RAD50-209ENST00000533482 ABCC2Q92887 1545 aa15.07■□□□□ 0
RAD50-209ENST00000533482 GOLGA6L6A8MZA4 724 aa15.07■□□□□ 0
RAD50-209ENST00000533482 FAM184AQ8NB25 1140 aa15.07■□□□□ 0
RAD50-209ENST00000533482 ANXA1P04083 346 aa15.07■□□□□ 0
RAD50-209ENST00000533482 MCM4P33991 863 aa15.07■□□□□ 0
RAD50-209ENST00000533482 SMC3Q9UQE7 1217 aa15.07■□□□□ 0
RAD50-209ENST00000533482 KDM6BO15054 1643 aa15.06■□□□□ 0
RAD50-209ENST00000533482 CABP4P57796 275 aa15.06■□□□□ 0
RAD50-209ENST00000533482 CCDC27Q2M243 656 aa15.06■□□□□ 0
RAD50-209ENST00000533482 NRDCO43847 1150 aa15.06■□□□□ 0
RAD50-209ENST00000533482 DNAJC2Q99543 621 aaKnown RBP15.06■□□□□ 0
RAD50-209ENST00000533482 SPATA31E1Q6ZUB1 1445 aa15.05■□□□□ 0
RAD50-209ENST00000533482 SF3A1Q15459 793 aaKnown RBP15.05■□□□□ 0
RAD50-209ENST00000533482 HSP90AB4PQ58FF6 505 aa15.05■□□□□ 0
RAD50-209ENST00000533482 HTATSF1O43719 755 aaKnown RBP15.05■□□□□ -0
RAD50-209ENST00000533482 RABEP1Q15276 862 aa15.05■□□□□ -0
RAD50-209ENST00000533482 FSD1Q9BTV5 496 aa15.05■□□□□ -0
RAD50-209ENST00000533482 MBIPQ9NS73 344 aa15.05■□□□□ -0
RAD50-209ENST00000533482 POLKQ9UBT6 870 aa15.05■□□□□ -0
RAD50-209ENST00000533482 PHF14O94880 888 aa15.05■□□□□ -0
RAD50-209ENST00000533482 TNRQ92752 1358 aa15.04■□□□□ -0
RAD50-209ENST00000533482 K7ELQ4 463 aaPredicted RBP15.04■□□□□ -0
RAD50-209ENST00000533482 LRRCC1Q9C099 1032 aa15.04■□□□□ -0
RAD50-209ENST00000533482 ERC2O15083 957 aa15.04■□□□□ -0
RAD50-209ENST00000533482 CCT4P50991 539 aaKnown RBP15.04■□□□□ -0
RAD50-209ENST00000533482 KRT24Q2M2I5 525 aa15.04■□□□□ -0
RAD50-209ENST00000533482 ATP6V1DQ9Y5K8 247 aa15.04■□□□□ -0
RAD50-209ENST00000533482 ASXL1Q8IXJ9 1541 aa15.04■□□□□ -0
RAD50-209ENST00000533482 MRE11P49959 708 aa15.03■□□□□ -0
RAD50-209ENST00000533482 CHRNA2Q15822 529 aa15.03■□□□□ -0
RAD50-209ENST00000533482 CSPP1Q1MSJ5 1256 aa15.03■□□□□ -0
RAD50-209ENST00000533482 WASHC4Q2M389 1173 aa15.03■□□□□ -0
RAD50-209ENST00000533482 PHACTR3Q96KR7 559 aa15.03■□□□□ -0
RAD50-209ENST00000533482 IFT57Q9NWB7 429 aa15.03■□□□□ -0
RAD50-209ENST00000533482 C8orf34Q49A92 452 aa15.03■□□□□ -0
RAD50-209ENST00000533482 KDM4AO75164 1064 aa15.03■□□□□ -0
RAD50-209ENST00000533482 MPNDQ8N594 471 aa15.03■□□□□ -0
RAD50-209ENST00000533482 ABCC10Q5T3U5 1492 aa15.02■□□□□ -0
RAD50-209ENST00000533482 SEC24BO95487 1268 aa15.02■□□□□ -0
RAD50-209ENST00000533482 ALDH1L2Q3SY69 923 aa15.02■□□□□ -0
RAD50-209ENST00000533482 CDK11BP21127 795 aaKnown RBP15.02■□□□□ -0
RAD50-209ENST00000533482 NASPP49321 788 aaPredicted RBP15.02■□□□□ -0
RAD50-209ENST00000533482 NUTM1Q86Y26 1132 aa15.02■□□□□ -0
RAD50-209ENST00000533482 SHANK2Q9UPX8 1470 aa15.02□□□□□ -0.01
RAD50-209ENST00000533482 PIP4K2BP78356 416 aa15.02□□□□□ -0.01
RAD50-209ENST00000533482 RPAP2Q8IXW5 612 aaPredicted RBP15.02□□□□□ -0.01
RAD50-209ENST00000533482 G3V3G9 751 aa15.01□□□□□ -0.01
RAD50-209ENST00000533482 DCAF8Q5TAQ9 597 aa15.01□□□□□ -0.01
RAD50-209ENST00000533482 ANKRD36BQ8N2N9 1353 aa15.01□□□□□ -0.01
RAD50-209ENST00000533482 UHRF1BP1Q6BDS2 1440 aa15.01□□□□□ -0.01
RAD50-209ENST00000533482 UPF3BQ9BZI7 483 aaKnown RBP15.01□□□□□ -0.01
RAD50-209ENST00000533482 TSHZ3Q63HK5 1081 aa15.01□□□□□ -0.01
RAD50-209ENST00000533482 TTC21BQ7Z4L5 1316 aa15.01□□□□□ -0.01
RAD50-209ENST00000533482 CNTROBQ8N137 903 aa15.01□□□□□ -0.01
RAD50-209ENST00000533482 TSPYL6Q8N831 410 aa15□□□□□ -0.01
RAD50-209ENST00000533482 ABCC11Q96J66 1382 aa15□□□□□ -0.01
RAD50-209ENST00000533482 TAF7Q15545 349 aaPredicted RBP15□□□□□ -0.01
RAD50-209ENST00000533482 VPS37DQ86XT2 251 aa15□□□□□ -0.01
RAD50-209ENST00000533482 KCNH5Q8NCM2 988 aa15□□□□□ -0.01
RAD50-209ENST00000533482 FBXW7Q969H0 707 aa15□□□□□ -0.01
RAD50-209ENST00000533482 UHRF1BP1LA0JNW5 1464 aa15□□□□□ -0.01
RAD50-209ENST00000533482 SPG7Q9UQ90 795 aa14.99□□□□□ -0.01
RAD50-209ENST00000533482 RNF20Q5VTR2 975 aa14.99□□□□□ -0.01
RAD50-209ENST00000533482 C8orf58Q8NAV2 365 aa14.99□□□□□ -0.01
RAD50-209ENST00000533482 BICD2Q8TD16 824 aa14.99□□□□□ -0.01
RAD50-209ENST00000533482 RIMS2Q9UQ26 1411 aa14.99□□□□□ -0.01
RAD50-209ENST00000533482 A0A1W2PP64 1363 aa14.99□□□□□ -0.01
RAD50-209ENST00000533482 FIBPO43427 364 aa14.99□□□□□ -0.01
RAD50-209ENST00000533482 CREBRFQ8IUR6 639 aa14.99□□□□□ -0.01
RAD50-209ENST00000533482 ARHGEF12Q9NZN5 1544 aa14.98□□□□□ -0.01
RAD50-209ENST00000533482 ADGRL2O95490 1459 aa14.98□□□□□ -0.01
RAD50-209ENST00000533482 COL17A1Q9UMD9 1497 aaPredicted RBP14.98□□□□□ -0.01
RAD50-209ENST00000533482 MEX3CQ5U5Q3 659 aaKnown RBP14.98□□□□□ -0.01
RAD50-209ENST00000533482 RSPH6AQ9H0K4 717 aa14.98□□□□□ -0.01
RAD50-209ENST00000533482 PPP6R1Q9UPN7 881 aa14.98□□□□□ -0.01
RAD50-209ENST00000533482 KCNA6P17658 529 aa14.98□□□□□ -0.01
RAD50-209ENST00000533482 PPIP5K1Q6PFW1 1433 aa14.98□□□□□ -0.01
RAD50-209ENST00000533482 KAT6BQ8WYB5 2073 aa14.97□□□□□ -0.01
RAD50-209ENST00000533482 MBD5Q9P267 1494 aa14.97□□□□□ -0.01
RAD50-209ENST00000533482 EIF4A2Q14240 407 aaKnown RBP14.97□□□□□ -0.01
RAD50-209ENST00000533482 CWC27Q6UX04 472 aaKnown RBP14.97□□□□□ -0.01
RAD50-209ENST00000533482 KRT28Q7Z3Y7 464 aa14.97□□□□□ -0.01
RAD50-209ENST00000533482 TMX4Q9H1E5 349 aaPredicted RBP14.97□□□□□ -0.01
RAD50-209ENST00000533482 TBC1D32Q96NH3 1257 aa14.97□□□□□ -0.01
RAD50-209ENST00000533482 KIF3AQ9Y496 699 aa14.97□□□□□ -0.01
RAD50-209ENST00000533482 POLR3AO14802 1390 aaPredicted RBP14.97□□□□□ -0.01
RAD50-209ENST00000533482 CABLES1Q8TDN4 633 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms