RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 DDX19BQ9UMR2 479 aa18.54■□□□□ 0.56
NXF1-213ENST00000532297 NEO1Q92859 1461 aa18.54■□□□□ 0.56
NXF1-213ENST00000532297 FAM83GA6ND36 823 aa18.54■□□□□ 0.56
NXF1-213ENST00000532297 SMC5Q8IY18 1101 aa18.54■□□□□ 0.56
NXF1-213ENST00000532297 ZBTB40Q9NUA8 1239 aa18.54■□□□□ 0.56
NXF1-213ENST00000532297 DCTN1Q14203 1278 aa18.53■□□□□ 0.56
NXF1-213ENST00000532297 RRS1Q15050 365 aaKnown RBP18.53■□□□□ 0.56
NXF1-213ENST00000532297 SNX21Q969T3 373 aa18.53■□□□□ 0.56
NXF1-213ENST00000532297 MAP2P11137 1827 aaKnown RBP18.53■□□□□ 0.56
NXF1-213ENST00000532297 TSPOAP1O95153 1857 aa18.53■□□□□ 0.56
NXF1-213ENST00000532297 RAB3GAP1Q15042 981 aa18.53■□□□□ 0.56
NXF1-213ENST00000532297 CIZ1Q9ULV3 898 aaPredicted RBP18.53■□□□□ 0.56
NXF1-213ENST00000532297 ARHGEF40Q8TER5 1519 aa18.53■□□□□ 0.56
NXF1-213ENST00000532297 RBM25P49756 843 aaKnown RBP18.53■□□□□ 0.56
NXF1-213ENST00000532297 ARHGAP31Q2M1Z3 1444 aa18.52■□□□□ 0.56
NXF1-213ENST00000532297 CCDC173Q0VFZ6 552 aa18.52■□□□□ 0.56
NXF1-213ENST00000532297 CLTCQ00610 1675 aaKnown RBP18.52■□□□□ 0.56
NXF1-213ENST00000532297 HDAC1Q13547 482 aaPredicted RBP18.52■□□□□ 0.55
NXF1-213ENST00000532297 FOXD4L1Q9NU39 408 aa18.51■□□□□ 0.55
NXF1-213ENST00000532297 PTMSP20962 102 aa18.5■□□□□ 0.55
NXF1-213ENST00000532297 NASPP49321 788 aaPredicted RBP18.5■□□□□ 0.55
NXF1-213ENST00000532297 NUTM2FA1L443 756 aa18.49■□□□□ 0.55
NXF1-213ENST00000532297 ZSCAN30Q86W11 494 aa18.49■□□□□ 0.55
NXF1-213ENST00000532297 ANP32BQ92688 251 aaKnown RBP18.49■□□□□ 0.55
NXF1-213ENST00000532297 ZFYVE9O95405 1425 aa18.49■□□□□ 0.55
NXF1-213ENST00000532297 FAM135BQ49AJ0 1406 aa18.49■□□□□ 0.55
NXF1-213ENST00000532297 IL16Q14005 1332 aa18.49■□□□□ 0.55
NXF1-213ENST00000532297 TXNDC2Q86VQ3 553 aa18.48■□□□□ 0.55
NXF1-213ENST00000532297 PPP1R9BQ96SB3 815 aa18.48■□□□□ 0.55
NXF1-213ENST00000532297 MED14O60244 1454 aa18.48■□□□□ 0.55
NXF1-213ENST00000532297 PNPLA6Q8IY17 1366 aa18.48■□□□□ 0.55
NXF1-213ENST00000532297 KRT24Q2M2I5 525 aa18.47■□□□□ 0.55
NXF1-213ENST00000532297 MSNP26038 577 aaKnown RBP18.47■□□□□ 0.55
NXF1-213ENST00000532297 KIF16BQ96L93 1317 aa18.47■□□□□ 0.55
NXF1-213ENST00000532297 OFD1O75665 1012 aa18.47■□□□□ 0.55
NXF1-213ENST00000532297 ANKRD45Q5TZF3 282 aa18.47■□□□□ 0.55
NXF1-213ENST00000532297 MBIPQ9NS73 344 aa18.47■□□□□ 0.55
NXF1-213ENST00000532297 SOX12O15370 315 aa18.46■□□□□ 0.55
NXF1-213ENST00000532297 IPO8O15397 1037 aaKnown RBP18.46■□□□□ 0.55
NXF1-213ENST00000532297 PPIP5K1Q6PFW1 1433 aa18.46■□□□□ 0.55
NXF1-213ENST00000532297 C8orf58Q8NAV2 365 aa18.46■□□□□ 0.55
NXF1-213ENST00000532297 NUCB1Q02818 461 aa18.45■□□□□ 0.54
NXF1-213ENST00000532297 DLG5Q8TDM6 1919 aa18.45■□□□□ 0.54
NXF1-213ENST00000532297 VAMP4O75379 141 aa18.45■□□□□ 0.54
NXF1-213ENST00000532297 FCHSD2O94868 740 aa18.45■□□□□ 0.54
NXF1-213ENST00000532297 RBM10P98175 930 aaKnown RBP18.45■□□□□ 0.54
NXF1-213ENST00000532297 GOLGA6L22H0YM25 854 aa18.44■□□□□ 0.54
NXF1-213ENST00000532297 CD2BP2O95400 341 aaKnown RBP18.44■□□□□ 0.54
NXF1-213ENST00000532297 NFE2L2Q16236 605 aa18.44■□□□□ 0.54
NXF1-213ENST00000532297 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.44■□□□□ 0.54
NXF1-213ENST00000532297 CHD1LQ86WJ1 897 aa18.44■□□□□ 0.54
NXF1-213ENST00000532297 SIRT2Q8IXJ6 389 aa18.44■□□□□ 0.54
NXF1-213ENST00000532297 FAM69CQ0P6D2 419 aa18.44■□□□□ 0.54
NXF1-213ENST00000532297 AEBP1Q8IUX7 1158 aa18.44■□□□□ 0.54
NXF1-213ENST00000532297 MRPL50Q8N5N7 158 aaKnown RBP18.44■□□□□ 0.54
NXF1-213ENST00000532297 RBM42Q9BTD8 480 aaKnown RBP18.44■□□□□ 0.54
NXF1-213ENST00000532297 SSFA2P28290 1259 aa18.43■□□□□ 0.54
NXF1-213ENST00000532297 DDX49Q9Y6V7 483 aaKnown RBP18.43■□□□□ 0.54
NXF1-213ENST00000532297 RIMBP3CA6NJZ7 1639 aa18.43■□□□□ 0.54
NXF1-213ENST00000532297 RIMBP3BA6NNM3 1639 aa18.43■□□□□ 0.54
NXF1-213ENST00000532297 RIMBP3Q9UFD9 1639 aa18.43■□□□□ 0.54
NXF1-213ENST00000532297 CPS1P31327 1500 aa18.43■□□□□ 0.54
NXF1-213ENST00000532297 METP08581 1390 aa18.43■□□□□ 0.54
NXF1-213ENST00000532297 KIF2CQ99661 725 aa18.42■□□□□ 0.54
NXF1-213ENST00000532297 ZBTB7BO15156 539 aaPredicted RBP18.42■□□□□ 0.54
NXF1-213ENST00000532297 IL13P35225 146 aa18.42■□□□□ 0.54
NXF1-213ENST00000532297 K7ELQ4 463 aaPredicted RBP18.42■□□□□ 0.54
NXF1-213ENST00000532297 RIMS2Q9UQ26 1411 aa18.41■□□□□ 0.54
NXF1-213ENST00000532297 A2ML1A8K2U0 1454 aa18.41■□□□□ 0.54
NXF1-213ENST00000532297 KLHL40Q2TBA0 621 aa18.41■□□□□ 0.54
NXF1-213ENST00000532297 APBB1O00213 710 aa18.4■□□□□ 0.54
NXF1-213ENST00000532297 CALD1Q05682 793 aaKnown RBP18.4■□□□□ 0.54
NXF1-213ENST00000532297 ALDH1L2Q3SY69 923 aa18.4■□□□□ 0.54
NXF1-213ENST00000532297 SETD1AO15047 1707 aaKnown RBP18.4■□□□□ 0.54
NXF1-213ENST00000532297 TWISTNBQ3B726 338 aaPredicted RBP18.4■□□□□ 0.54
NXF1-213ENST00000532297 CDC42BPGQ6DT37 1551 aa18.39■□□□□ 0.53
NXF1-213ENST00000532297 R3HCC1Q9Y3T6 440 aaKnown RBP18.39■□□□□ 0.53
NXF1-213ENST00000532297 FAM13BQ9NYF5 915 aa18.39■□□□□ 0.53
NXF1-213ENST00000532297 IBTKQ9P2D0 1353 aaPredicted RBP18.38■□□□□ 0.53
NXF1-213ENST00000532297 TERF1P54274 439 aa18.38■□□□□ 0.53
NXF1-213ENST00000532297 GAS2L2Q8NHY3 880 aa18.38■□□□□ 0.53
NXF1-213ENST00000532297 KNDC1Q76NI1 1749 aa18.38■□□□□ 0.53
NXF1-213ENST00000532297 BAG4O95429 457 aaKnown RBP18.38■□□□□ 0.53
NXF1-213ENST00000532297 WASLO00401 505 aaPredicted RBP18.37■□□□□ 0.53
NXF1-213ENST00000532297 BMP2KLQ5H9B9 411 aa18.37■□□□□ 0.53
NXF1-213ENST00000532297 C16orf71Q8IYS4 520 aaPredicted RBP18.37■□□□□ 0.53
NXF1-213ENST00000532297 NUDT16Q96DE0 195 aaKnown RBP18.37■□□□□ 0.53
NXF1-213ENST00000532297 NCLP19338 710 aaKnown RBP18.36■□□□□ 0.53
NXF1-213ENST00000532297 TBC1D9Q6ZT07 1266 aa18.36■□□□□ 0.53
NXF1-213ENST00000532297 MCM10Q7L590 875 aa18.36■□□□□ 0.53
NXF1-213ENST00000532297 OTUD7AQ8TE49 926 aaPredicted RBP18.36■□□□□ 0.53
NXF1-213ENST00000532297 PRR36Q9H6K5 1346 aa18.36■□□□□ 0.53
NXF1-213ENST00000532297 NRXN3Q9Y4C0 1643 aa18.36■□□□□ 0.53
NXF1-213ENST00000532297 AK9Q5TCS8 1911 aa18.35■□□□□ 0.53
NXF1-213ENST00000532297 ATP7BP35670 1465 aa18.35■□□□□ 0.53
NXF1-213ENST00000532297 CLEC17AQ6ZS10 378 aa18.35■□□□□ 0.53
NXF1-213ENST00000532297 MIS18AQ9NYP9 233 aa18.35■□□□□ 0.53
NXF1-213ENST00000532297 PLPPR3Q6T4P5 718 aa18.35■□□□□ 0.53
NXF1-213ENST00000532297 ZNF428Q96B54 188 aa18.35■□□□□ 0.53
NXF1-213ENST00000532297 MAP7D2Q96T17 732 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 194.7 ms