RNA–Protein interactions for RNA: ENST00000531114.5

PDZD3-212, Transcript of PDZ domain containing 3, humanhuman

TSL 2 BASIC

Gene PDZD3, Length 2,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-212ENST00000531114 ARHGAP23Q9P227 1491 aa19.7■□□□□ 0.74
PDZD3-212ENST00000531114 KNDC1Q76NI1 1749 aa19.69■□□□□ 0.74
PDZD3-212ENST00000531114 FTSJ3Q8IY81 847 aaKnown RBP19.68■□□□□ 0.74
PDZD3-212ENST00000531114 TSPYL6Q8N831 410 aa19.68■□□□□ 0.74
PDZD3-212ENST00000531114 NOB1Q9ULX3 412 aaKnown RBP19.68■□□□□ 0.74
PDZD3-212ENST00000531114 SLIT1O75093 1534 aa19.68■□□□□ 0.74
PDZD3-212ENST00000531114 USP6P35125 1406 aa19.68■□□□□ 0.74
PDZD3-212ENST00000531114 ANP32AP39687 249 aaKnown RBP19.68■□□□□ 0.74
PDZD3-212ENST00000531114 ZKSCAN2Q63HK3 967 aa19.68■□□□□ 0.74
PDZD3-212ENST00000531114 AATKQ6ZMQ8 1374 aa19.68■□□□□ 0.74
PDZD3-212ENST00000531114 TRIM27P14373 513 aa19.67■□□□□ 0.74
PDZD3-212ENST00000531114 C14orf37Q86TY3 774 aa19.67■□□□□ 0.74
PDZD3-212ENST00000531114 MS4A1P11836 297 aa19.66■□□□□ 0.74
PDZD3-212ENST00000531114 NCBP3Q53F19 620 aaKnown RBP19.66■□□□□ 0.74
PDZD3-212ENST00000531114 DZIP1LQ8IYY4 767 aaKnown RBP19.66■□□□□ 0.74
PDZD3-212ENST00000531114 NLRP6P59044 892 aa19.65■□□□□ 0.74
PDZD3-212ENST00000531114 ANKLE2Q86XL3 938 aa19.65■□□□□ 0.74
PDZD3-212ENST00000531114 MAP3K19Q56UN5 1328 aa19.64■□□□□ 0.74
PDZD3-212ENST00000531114 CDK12Q9NYV4 1490 aaPredicted RBP19.64■□□□□ 0.73
PDZD3-212ENST00000531114 ITPRIPQ8IWB1 547 aa19.64■□□□□ 0.73
PDZD3-212ENST00000531114 IL16Q14005 1332 aa19.63■□□□□ 0.73
PDZD3-212ENST00000531114 MBIPQ9NS73 344 aa19.63■□□□□ 0.73
PDZD3-212ENST00000531114 MVPQ14764 893 aaKnown RBP19.62■□□□□ 0.73
PDZD3-212ENST00000531114 MCM10Q7L590 875 aa19.62■□□□□ 0.73
PDZD3-212ENST00000531114 MON2Q7Z3U7 1717 aa19.62■□□□□ 0.73
PDZD3-212ENST00000531114 BRPF3Q9ULD4 1205 aa19.62■□□□□ 0.73
PDZD3-212ENST00000531114 KRT24Q2M2I5 525 aa19.61■□□□□ 0.73
PDZD3-212ENST00000531114 FOXO3O43524 673 aa19.61■□□□□ 0.73
PDZD3-212ENST00000531114 ATF7IPQ6VMQ6 1270 aa19.61■□□□□ 0.73
PDZD3-212ENST00000531114 TMEM57Q8N5G2 664 aa19.61■□□□□ 0.73
PDZD3-212ENST00000531114 LTV1Q96GA3 475 aaPredicted RBP19.61■□□□□ 0.73
PDZD3-212ENST00000531114 ZBTB47Q9UFB7 747 aaPredicted RBP19.61■□□□□ 0.73
PDZD3-212ENST00000531114 OVOS2A0A0J9YW53 1432 aa19.61■□□□□ 0.73
PDZD3-212ENST00000531114 OVOS2Q6IE36 1432 aa19.61■□□□□ 0.73
PDZD3-212ENST00000531114 AMPHP49418 695 aa19.6■□□□□ 0.73
PDZD3-212ENST00000531114 C8orf58Q8NAV2 365 aa19.6■□□□□ 0.73
PDZD3-212ENST00000531114 IPO9Q96P70 1041 aaKnown RBP19.6■□□□□ 0.73
PDZD3-212ENST00000531114 ITSN1Q15811 1721 aa19.6■□□□□ 0.73
PDZD3-212ENST00000531114 ABTB2Q8N961 1025 aa19.59■□□□□ 0.73
PDZD3-212ENST00000531114 RIMS1Q86UR5 1692 aaKnown RBP19.59■□□□□ 0.73
PDZD3-212ENST00000531114 PTCH1Q13635 1447 aa19.59■□□□□ 0.73
PDZD3-212ENST00000531114 MIS18AQ9NYP9 233 aa19.59■□□□□ 0.73
PDZD3-212ENST00000531114 AKAP12Q02952 1782 aa19.58■□□□□ 0.73
PDZD3-212ENST00000531114 ZBTB7CA1YPR0 619 aa19.58■□□□□ 0.73
PDZD3-212ENST00000531114 VAMP4O75379 141 aa19.58■□□□□ 0.73
PDZD3-212ENST00000531114 DIP2AQ14689 1571 aa19.58■□□□□ 0.72
PDZD3-212ENST00000531114 CEP170BQ9Y4F5 1589 aaPredicted RBP19.58■□□□□ 0.72
PDZD3-212ENST00000531114 CT47B1P0C2W7 299 aaPredicted RBP19.58■□□□□ 0.72
PDZD3-212ENST00000531114 XPCQ01831 940 aaPredicted RBP19.58■□□□□ 0.72
PDZD3-212ENST00000531114 SSH2Q76I76 1423 aa19.58■□□□□ 0.72
PDZD3-212ENST00000531114 GNAI1P63096 354 aa19.57■□□□□ 0.72
PDZD3-212ENST00000531114 C8orf34Q49A92 452 aa19.57■□□□□ 0.72
PDZD3-212ENST00000531114 RGPD8O14715 1765 aaPredicted RBP19.57■□□□□ 0.72
PDZD3-212ENST00000531114 ESCO1Q5FWF5 840 aa19.55■□□□□ 0.72
PDZD3-212ENST00000531114 IFT57Q9NWB7 429 aa19.55■□□□□ 0.72
PDZD3-212ENST00000531114 ZNF853P0CG23 659 aa19.55■□□□□ 0.72
PDZD3-212ENST00000531114 TWISTNBQ3B726 338 aaPredicted RBP19.55■□□□□ 0.72
PDZD3-212ENST00000531114 TTC21AQ8NDW8 1320 aa19.54■□□□□ 0.72
PDZD3-212ENST00000531114 CFAP44Q96MT7 982 aa19.54■□□□□ 0.72
PDZD3-212ENST00000531114 EYA1Q99502 592 aa19.54■□□□□ 0.72
PDZD3-212ENST00000531114 PDZRN3Q9UPQ7 1066 aa19.54■□□□□ 0.72
PDZD3-212ENST00000531114 USP31Q70CQ4 1352 aa19.54■□□□□ 0.72
PDZD3-212ENST00000531114 FAM161AQ3B820 660 aa19.53■□□□□ 0.72
PDZD3-212ENST00000531114 PHF8Q9UPP1 1060 aa19.53■□□□□ 0.72
PDZD3-212ENST00000531114 MTHFSDQ2M296 383 aaKnown RBP19.52■□□□□ 0.72
PDZD3-212ENST00000531114 USHBP1Q8N6Y0 703 aa19.52■□□□□ 0.72
PDZD3-212ENST00000531114 TOPAZ1Q8N9V7 1692 aa19.52■□□□□ 0.72
PDZD3-212ENST00000531114 CALD1Q05682 793 aaKnown RBP19.52■□□□□ 0.71
PDZD3-212ENST00000531114 C1orf115Q9H7X2 142 aa19.52■□□□□ 0.71
PDZD3-212ENST00000531114 SLC4A3P48751 1232 aa19.51■□□□□ 0.71
PDZD3-212ENST00000531114 MRPL50Q8N5N7 158 aaKnown RBP19.51■□□□□ 0.71
PDZD3-212ENST00000531114 PEAK1Q9H792 1746 aa19.51■□□□□ 0.71
PDZD3-212ENST00000531114 LMOD3Q0VAK6 560 aa19.51■□□□□ 0.71
PDZD3-212ENST00000531114 ORAI2Q96SN7 254 aa19.51■□□□□ 0.71
PDZD3-212ENST00000531114 RWDD1Q9H446 243 aaPredicted RBP19.51■□□□□ 0.71
PDZD3-212ENST00000531114 NRKQ7Z2Y5 1582 aa19.5■□□□□ 0.71
PDZD3-212ENST00000531114 IPO8O15397 1037 aaKnown RBP19.5■□□□□ 0.71
PDZD3-212ENST00000531114 LMOD2Q6P5Q4 547 aa19.5■□□□□ 0.71
PDZD3-212ENST00000531114 KIF16BQ96L93 1317 aa19.5■□□□□ 0.71
PDZD3-212ENST00000531114 ALDH1L2Q3SY69 923 aa19.5■□□□□ 0.71
PDZD3-212ENST00000531114 DDX19BQ9UMR2 479 aa19.5■□□□□ 0.71
PDZD3-212ENST00000531114 SEC24BO95487 1268 aa19.49■□□□□ 0.71
PDZD3-212ENST00000531114 PSME1Q06323 249 aa19.49■□□□□ 0.71
PDZD3-212ENST00000531114 FLT4P35916 1363 aa19.48■□□□□ 0.71
PDZD3-212ENST00000531114 XRN1Q8IZH2 1706 aaKnown RBP19.48■□□□□ 0.71
PDZD3-212ENST00000531114 HOXC9P31274 260 aa19.47■□□□□ 0.71
PDZD3-212ENST00000531114 ZBTB40Q9NUA8 1239 aa19.47■□□□□ 0.71
PDZD3-212ENST00000531114 SBNO1A3KN83 1393 aa19.47■□□□□ 0.71
PDZD3-212ENST00000531114 PIK3R4Q99570 1358 aa19.45■□□□□ 0.7
PDZD3-212ENST00000531114 CHL1O00533 1208 aa19.44■□□□□ 0.7
PDZD3-212ENST00000531114 DLG5Q8TDM6 1919 aa19.43■□□□□ 0.7
PDZD3-212ENST00000531114 RTF1Q92541 710 aaKnown RBP19.43■□□□□ 0.7
PDZD3-212ENST00000531114 PROSER2Q86WR7 435 aaPredicted RBP19.43■□□□□ 0.7
PDZD3-212ENST00000531114 AAMPQ13685 434 aa19.42■□□□□ 0.7
PDZD3-212ENST00000531114 ANKARQ7Z5J8 1434 aa19.42■□□□□ 0.7
PDZD3-212ENST00000531114 PIK3C2AO00443 1686 aa19.42■□□□□ 0.7
PDZD3-212ENST00000531114 NECTIN2Q92692 538 aa19.42■□□□□ 0.7
PDZD3-212ENST00000531114 PKNOX2Q96KN3 472 aa19.41■□□□□ 0.7
PDZD3-212ENST00000531114 IGSF1Q8N6C5 1336 aa19.41■□□□□ 0.7
PDZD3-212ENST00000531114 NPHP4O75161 1426 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms