RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 MAP2P11137 1827 aaKnown RBP14.72□□□□□ -0.05
USP35-207ENST00000530546 NFE2L2Q16236 605 aa14.72□□□□□ -0.05
USP35-207ENST00000530546 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.72□□□□□ -0.05
USP35-207ENST00000530546 TBX22Q9Y458 520 aa14.72□□□□□ -0.05
USP35-207ENST00000530546 PODXL2Q9NZ53 605 aa14.71□□□□□ -0.05
USP35-207ENST00000530546 NGDNQ8NEJ9 315 aaKnown RBP14.7□□□□□ -0.06
USP35-207ENST00000530546 PCDHB15Q9Y5E8 787 aa14.7□□□□□ -0.06
USP35-207ENST00000530546 IL16Q14005 1332 aa14.7□□□□□ -0.06
USP35-207ENST00000530546 PLEKHG3A1L390 1219 aa14.7□□□□□ -0.06
USP35-207ENST00000530546 DZIP1LQ8IYY4 767 aaKnown RBP14.7□□□□□ -0.06
USP35-207ENST00000530546 AATKQ6ZMQ8 1374 aa14.7□□□□□ -0.06
USP35-207ENST00000530546 NOB1Q9ULX3 412 aaKnown RBP14.7□□□□□ -0.06
USP35-207ENST00000530546 ELL2O00472 640 aaPredicted RBP14.69□□□□□ -0.06
USP35-207ENST00000530546 FER1L4A9Z1Z3 1794 aa14.69□□□□□ -0.06
USP35-207ENST00000530546 AEBP1Q8IUX7 1158 aa14.69□□□□□ -0.06
USP35-207ENST00000530546 CT47B1P0C2W7 299 aaPredicted RBP14.68□□□□□ -0.06
USP35-207ENST00000530546 KCNA6P17658 529 aa14.68□□□□□ -0.06
USP35-207ENST00000530546 MVPQ14764 893 aaKnown RBP14.68□□□□□ -0.06
USP35-207ENST00000530546 CDK12Q9NYV4 1490 aaPredicted RBP14.68□□□□□ -0.06
USP35-207ENST00000530546 FAM83GA6ND36 823 aa14.68□□□□□ -0.06
USP35-207ENST00000530546 TRIM27P14373 513 aa14.68□□□□□ -0.06
USP35-207ENST00000530546 DCTN1Q14203 1278 aa14.68□□□□□ -0.06
USP35-207ENST00000530546 RBM33Q96EV2 1170 aaKnown RBP14.68□□□□□ -0.06
USP35-207ENST00000530546 EIF4A2Q14240 407 aaKnown RBP14.67□□□□□ -0.06
USP35-207ENST00000530546 SULT6B1Q6IMI4 303 aa14.67□□□□□ -0.06
USP35-207ENST00000530546 ITPRIPQ8IWB1 547 aa14.67□□□□□ -0.06
USP35-207ENST00000530546 MON2Q7Z3U7 1717 aa14.67□□□□□ -0.06
USP35-207ENST00000530546 ARHGAP23Q9P227 1491 aa14.67□□□□□ -0.06
USP35-207ENST00000530546 HSP90AB2PQ58FF8 381 aa14.67□□□□□ -0.06
USP35-207ENST00000530546 ITSN1Q15811 1721 aa14.67□□□□□ -0.06
USP35-207ENST00000530546 USP6P35125 1406 aa14.67□□□□□ -0.06
USP35-207ENST00000530546 SLIT1O75093 1534 aa14.67□□□□□ -0.06
USP35-207ENST00000530546 FAM161AQ3B820 660 aa14.66□□□□□ -0.06
USP35-207ENST00000530546 NUTM2GQ5VZR2 741 aa14.66□□□□□ -0.06
USP35-207ENST00000530546 ATF7IPQ6VMQ6 1270 aa14.65□□□□□ -0.06
USP35-207ENST00000530546 AKAP12Q02952 1782 aa14.65□□□□□ -0.06
USP35-207ENST00000530546 TSPYL6Q8N831 410 aa14.64□□□□□ -0.07
USP35-207ENST00000530546 C8orf34Q49A92 452 aa14.64□□□□□ -0.07
USP35-207ENST00000530546 TMEM57Q8N5G2 664 aa14.64□□□□□ -0.07
USP35-207ENST00000530546 MBIPQ9NS73 344 aa14.64□□□□□ -0.07
USP35-207ENST00000530546 GNAI1P63096 354 aa14.63□□□□□ -0.07
USP35-207ENST00000530546 CALD1Q05682 793 aaKnown RBP14.63□□□□□ -0.07
USP35-207ENST00000530546 RWDD1Q9H446 243 aaPredicted RBP14.63□□□□□ -0.07
USP35-207ENST00000530546 C14orf37Q86TY3 774 aa14.62□□□□□ -0.07
USP35-207ENST00000530546 OVOS2A0A0J9YW53 1432 aa14.62□□□□□ -0.07
USP35-207ENST00000530546 OVOS2Q6IE36 1432 aa14.62□□□□□ -0.07
USP35-207ENST00000530546 IPO8O15397 1037 aaKnown RBP14.61□□□□□ -0.07
USP35-207ENST00000530546 LMOD3Q0VAK6 560 aa14.61□□□□□ -0.07
USP35-207ENST00000530546 IFT57Q9NWB7 429 aa14.61□□□□□ -0.07
USP35-207ENST00000530546 PDZRN3Q9UPQ7 1066 aa14.61□□□□□ -0.07
USP35-207ENST00000530546 MAP3K19Q56UN5 1328 aa14.61□□□□□ -0.07
USP35-207ENST00000530546 NLRP6P59044 892 aa14.61□□□□□ -0.07
USP35-207ENST00000530546 PTCH1Q13635 1447 aa14.61□□□□□ -0.07
USP35-207ENST00000530546 KIF16BQ96L93 1317 aa14.61□□□□□ -0.07
USP35-207ENST00000530546 VAMP4O75379 141 aa14.61□□□□□ -0.07
USP35-207ENST00000530546 AMPHP49418 695 aa14.61□□□□□ -0.07
USP35-207ENST00000530546 AAMPQ13685 434 aa14.61□□□□□ -0.07
USP35-207ENST00000530546 ANKLE2Q86XL3 938 aa14.6□□□□□ -0.07
USP35-207ENST00000530546 DDX19BQ9UMR2 479 aa14.6□□□□□ -0.07
USP35-207ENST00000530546 ALDH1L2Q3SY69 923 aa14.6□□□□□ -0.07
USP35-207ENST00000530546 MCM10Q7L590 875 aa14.6□□□□□ -0.07
USP35-207ENST00000530546 C8orf58Q8NAV2 365 aa14.6□□□□□ -0.07
USP35-207ENST00000530546 DIP2AQ14689 1571 aa14.6□□□□□ -0.07
USP35-207ENST00000530546 FRAT2O75474 233 aaPredicted RBP14.59□□□□□ -0.07
USP35-207ENST00000530546 TWISTNBQ3B726 338 aaPredicted RBP14.59□□□□□ -0.07
USP35-207ENST00000530546 TTC21AQ8NDW8 1320 aa14.59□□□□□ -0.07
USP35-207ENST00000530546 TOPAZ1Q8N9V7 1692 aa14.59□□□□□ -0.07
USP35-207ENST00000530546 CFAP44Q96MT7 982 aa14.59□□□□□ -0.07
USP35-207ENST00000530546 ZMYND15Q9H091 742 aa14.59□□□□□ -0.07
USP35-207ENST00000530546 L1TD1Q5T7N2 865 aaKnown RBP14.58□□□□□ -0.07
USP35-207ENST00000530546 ZNF853P0CG23 659 aa14.58□□□□□ -0.08
USP35-207ENST00000530546 SSH2Q76I76 1423 aa14.58□□□□□ -0.08
USP35-207ENST00000530546 RRP9O43818 475 aaKnown RBP14.58□□□□□ -0.08
USP35-207ENST00000530546 NRKQ7Z2Y5 1582 aa14.57□□□□□ -0.08
USP35-207ENST00000530546 CEP170BQ9Y4F5 1589 aaPredicted RBP14.57□□□□□ -0.08
USP35-207ENST00000530546 RIMS1Q86UR5 1692 aaKnown RBP14.57□□□□□ -0.08
USP35-207ENST00000530546 MRPL50Q8N5N7 158 aaKnown RBP14.57□□□□□ -0.08
USP35-207ENST00000530546 USP31Q70CQ4 1352 aa14.57□□□□□ -0.08
USP35-207ENST00000530546 SLC4A3P48751 1232 aa14.57□□□□□ -0.08
USP35-207ENST00000530546 KRT24Q2M2I5 525 aa14.57□□□□□ -0.08
USP35-207ENST00000530546 ABTB2Q8N961 1025 aa14.57□□□□□ -0.08
USP35-207ENST00000530546 LTV1Q96GA3 475 aaPredicted RBP14.57□□□□□ -0.08
USP35-207ENST00000530546 RGPD8O14715 1765 aaPredicted RBP14.56□□□□□ -0.08
USP35-207ENST00000530546 FOXO3O43524 673 aa14.56□□□□□ -0.08
USP35-207ENST00000530546 VSIG10Q8N0Z9 540 aa14.56□□□□□ -0.08
USP35-207ENST00000530546 RRAGDQ9NQL2 400 aaPredicted RBP14.55□□□□□ -0.08
USP35-207ENST00000530546 PEAK1Q9H792 1746 aa14.55□□□□□ -0.08
USP35-207ENST00000530546 ZBTB7CA1YPR0 619 aa14.55□□□□□ -0.08
USP35-207ENST00000530546 C1orf115Q9H7X2 142 aa14.55□□□□□ -0.08
USP35-207ENST00000530546 ZBTB40Q9NUA8 1239 aa14.55□□□□□ -0.08
USP35-207ENST00000530546 MIS18AQ9NYP9 233 aa14.55□□□□□ -0.08
USP35-207ENST00000530546 ZNF428Q96B54 188 aa14.54□□□□□ -0.08
USP35-207ENST00000530546 SEC24BO95487 1268 aa14.54□□□□□ -0.08
USP35-207ENST00000530546 EYA1Q99502 592 aa14.54□□□□□ -0.08
USP35-207ENST00000530546 FLT4P35916 1363 aa14.53□□□□□ -0.08
USP35-207ENST00000530546 SBNO1A3KN83 1393 aa14.53□□□□□ -0.08
USP35-207ENST00000530546 HSP90AA2PQ14568 343 aaPredicted RBP14.53□□□□□ -0.08
USP35-207ENST00000530546 MTHFSDQ2M296 383 aaKnown RBP14.53□□□□□ -0.08
USP35-207ENST00000530546 PHF8Q9UPP1 1060 aa14.53□□□□□ -0.08
USP35-207ENST00000530546 XRN1Q8IZH2 1706 aaKnown RBP14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms