RNA–Protein interactions for RNA: ENST00000530267.5

USP35-204, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2 BASIC

Gene USP35, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-204ENST00000530267 AEBP1Q8IUX7 1158 aa19.4■□□□□ 0.7
USP35-204ENST00000530267 ITPRIPQ8IWB1 547 aa19.4■□□□□ 0.7
USP35-204ENST00000530267 DCTN1Q14203 1278 aa19.4■□□□□ 0.7
USP35-204ENST00000530267 SLIT1O75093 1534 aa19.39■□□□□ 0.69
USP35-204ENST00000530267 NGDNQ8NEJ9 315 aaKnown RBP19.39■□□□□ 0.69
USP35-204ENST00000530267 USP6P35125 1406 aa19.38■□□□□ 0.69
USP35-204ENST00000530267 EIF4A2Q14240 407 aaKnown RBP19.38■□□□□ 0.69
USP35-204ENST00000530267 HSP90AB2PQ58FF8 381 aa19.38■□□□□ 0.69
USP35-204ENST00000530267 ATF7IPQ6VMQ6 1270 aa19.38■□□□□ 0.69
USP35-204ENST00000530267 ARHGAP23Q9P227 1491 aa19.38■□□□□ 0.69
USP35-204ENST00000530267 SULT6B1Q6IMI4 303 aa19.37■□□□□ 0.69
USP35-204ENST00000530267 KCNA6P17658 529 aa19.37■□□□□ 0.69
USP35-204ENST00000530267 NBR1Q14596 966 aa19.37■□□□□ 0.69
USP35-204ENST00000530267 TSPYL6Q8N831 410 aa19.37■□□□□ 0.69
USP35-204ENST00000530267 RBM33Q96EV2 1170 aaKnown RBP19.36■□□□□ 0.69
USP35-204ENST00000530267 TMEM57Q8N5G2 664 aa19.35■□□□□ 0.69
USP35-204ENST00000530267 MBIPQ9NS73 344 aa19.35■□□□□ 0.69
USP35-204ENST00000530267 NUTM2GQ5VZR2 741 aa19.34■□□□□ 0.69
USP35-204ENST00000530267 TOPAZ1Q8N9V7 1692 aa19.34■□□□□ 0.69
USP35-204ENST00000530267 RGPD8O14715 1765 aaPredicted RBP19.33■□□□□ 0.69
USP35-204ENST00000530267 RWDD1Q9H446 243 aaPredicted RBP19.33■□□□□ 0.69
USP35-204ENST00000530267 OVOS2A0A0J9YW53 1432 aa19.33■□□□□ 0.68
USP35-204ENST00000530267 OVOS2Q6IE36 1432 aa19.33■□□□□ 0.68
USP35-204ENST00000530267 NRKQ7Z2Y5 1582 aa19.32■□□□□ 0.68
USP35-204ENST00000530267 GNAI1P63096 354 aa19.32■□□□□ 0.68
USP35-204ENST00000530267 AAMPQ13685 434 aa19.32■□□□□ 0.68
USP35-204ENST00000530267 CALD1Q05682 793 aaKnown RBP19.32■□□□□ 0.68
USP35-204ENST00000530267 PDZRN3Q9UPQ7 1066 aa19.32■□□□□ 0.68
USP35-204ENST00000530267 IFT57Q9NWB7 429 aa19.31■□□□□ 0.68
USP35-204ENST00000530267 KIF16BQ96L93 1317 aa19.31■□□□□ 0.68
USP35-204ENST00000530267 VAMP4O75379 141 aa19.31■□□□□ 0.68
USP35-204ENST00000530267 PTCH1Q13635 1447 aa19.31■□□□□ 0.68
USP35-204ENST00000530267 DLG5Q8TDM6 1919 aa19.31■□□□□ 0.68
USP35-204ENST00000530267 DDX19BQ9UMR2 479 aa19.31■□□□□ 0.68
USP35-204ENST00000530267 DIP2AQ14689 1571 aa19.3■□□□□ 0.68
USP35-204ENST00000530267 IPO8O15397 1037 aaKnown RBP19.3■□□□□ 0.68
USP35-204ENST00000530267 MAP3K19Q56UN5 1328 aa19.3■□□□□ 0.68
USP35-204ENST00000530267 ALDH1L2Q3SY69 923 aa19.3■□□□□ 0.68
USP35-204ENST00000530267 C8orf58Q8NAV2 365 aa19.3■□□□□ 0.68
USP35-204ENST00000530267 SLC4A3P48751 1232 aa19.29■□□□□ 0.68
USP35-204ENST00000530267 LMOD3Q0VAK6 560 aa19.29■□□□□ 0.68
USP35-204ENST00000530267 MCM10Q7L590 875 aa19.29■□□□□ 0.68
USP35-204ENST00000530267 CFAP44Q96MT7 982 aa19.29■□□□□ 0.68
USP35-204ENST00000530267 ZNF853P0CG23 659 aa19.28■□□□□ 0.68
USP35-204ENST00000530267 TWISTNBQ3B726 338 aaPredicted RBP19.28■□□□□ 0.68
USP35-204ENST00000530267 PEAK1Q9H792 1746 aa19.28■□□□□ 0.68
USP35-204ENST00000530267 NLRP6P59044 892 aa19.27■□□□□ 0.68
USP35-204ENST00000530267 SSH2Q76I76 1423 aa19.27■□□□□ 0.68
USP35-204ENST00000530267 AMPHP49418 695 aa19.26■□□□□ 0.67
USP35-204ENST00000530267 C14orf37Q86TY3 774 aa19.26■□□□□ 0.67
USP35-204ENST00000530267 CEP170BQ9Y4F5 1589 aaPredicted RBP19.26■□□□□ 0.67
USP35-204ENST00000530267 USP31Q70CQ4 1352 aa19.26■□□□□ 0.67
USP35-204ENST00000530267 TTC21AQ8NDW8 1320 aa19.26■□□□□ 0.67
USP35-204ENST00000530267 SEC24BO95487 1268 aa19.25■□□□□ 0.67
USP35-204ENST00000530267 KRT24Q2M2I5 525 aa19.25■□□□□ 0.67
USP35-204ENST00000530267 MRPL50Q8N5N7 158 aaKnown RBP19.25■□□□□ 0.67
USP35-204ENST00000530267 RIMS1Q86UR5 1692 aaKnown RBP19.25■□□□□ 0.67
USP35-204ENST00000530267 ZBTB40Q9NUA8 1239 aa19.25■□□□□ 0.67
USP35-204ENST00000530267 ANKLE2Q86XL3 938 aa19.24■□□□□ 0.67
USP35-204ENST00000530267 FOXO3O43524 673 aa19.24■□□□□ 0.67
USP35-204ENST00000530267 DDRGK1Q96HY6 314 aa19.23■□□□□ 0.67
USP35-204ENST00000530267 C1orf115Q9H7X2 142 aa19.23■□□□□ 0.67
USP35-204ENST00000530267 XRN1Q8IZH2 1706 aaKnown RBP19.22■□□□□ 0.67
USP35-204ENST00000530267 ABTB2Q8N961 1025 aa19.22■□□□□ 0.67
USP35-204ENST00000530267 ZNF428Q96B54 188 aa19.22■□□□□ 0.67
USP35-204ENST00000530267 MIS18AQ9NYP9 233 aa19.22■□□□□ 0.67
USP35-204ENST00000530267 NALCNQ8IZF0 1738 aa19.22■□□□□ 0.67
USP35-204ENST00000530267 PLEKHG5O94827 1062 aa19.21■□□□□ 0.67
USP35-204ENST00000530267 LTV1Q96GA3 475 aaPredicted RBP19.21■□□□□ 0.67
USP35-204ENST00000530267 FLT4P35916 1363 aa19.2■□□□□ 0.66
USP35-204ENST00000530267 HDAC1Q13547 482 aaPredicted RBP19.2■□□□□ 0.66
USP35-204ENST00000530267 EYA1Q99502 592 aa19.2■□□□□ 0.66
USP35-204ENST00000530267 DNAJC5Q9H3Z4 198 aa19.2■□□□□ 0.66
USP35-204ENST00000530267 DAXXQ9UER7 740 aaPredicted RBP19.2■□□□□ 0.66
USP35-204ENST00000530267 MTHFSDQ2M296 383 aaKnown RBP19.19■□□□□ 0.66
USP35-204ENST00000530267 SBNO1A3KN83 1393 aa19.19■□□□□ 0.66
USP35-204ENST00000530267 PIK3C2AO00443 1686 aa19.19■□□□□ 0.66
USP35-204ENST00000530267 BRPF1P55201 1214 aaPredicted RBP19.19■□□□□ 0.66
USP35-204ENST00000530267 ZBTB7BO15156 539 aaPredicted RBP19.17■□□□□ 0.66
USP35-204ENST00000530267 CHL1O00533 1208 aa19.16■□□□□ 0.66
USP35-204ENST00000530267 PHF8Q9UPP1 1060 aa19.16■□□□□ 0.66
USP35-204ENST00000530267 PIK3R4Q99570 1358 aa19.16■□□□□ 0.66
USP35-204ENST00000530267 ZBTB7CA1YPR0 619 aa19.15■□□□□ 0.66
USP35-204ENST00000530267 ARHGAP45Q92619 1136 aa19.15■□□□□ 0.66
USP35-204ENST00000530267 ANKARQ7Z5J8 1434 aa19.15■□□□□ 0.66
USP35-204ENST00000530267 ARHGEF10O15013 1369 aa19.15■□□□□ 0.66
USP35-204ENST00000530267 USP19O94966 1318 aa19.15■□□□□ 0.66
USP35-204ENST00000530267 HOXC9P31274 260 aa19.15■□□□□ 0.66
USP35-204ENST00000530267 ESCO1Q5FWF5 840 aa19.15■□□□□ 0.66
USP35-204ENST00000530267 RTF1Q92541 710 aaKnown RBP19.15■□□□□ 0.66
USP35-204ENST00000530267 BCL11AQ9H165 835 aa19.14■□□□□ 0.66
USP35-204ENST00000530267 RGPD1P0DJD0 1748 aa19.14■□□□□ 0.66
USP35-204ENST00000530267 LNPKQ9C0E8 428 aa19.14■□□□□ 0.65
USP35-204ENST00000530267 FMN2Q9NZ56 1722 aa19.14■□□□□ 0.65
USP35-204ENST00000530267 VIRMAQ69YN4 1812 aaKnown RBP19.13■□□□□ 0.65
USP35-204ENST00000530267 SMC5Q8IY18 1101 aa19.13■□□□□ 0.65
USP35-204ENST00000530267 ABCC4O15439 1325 aa19.13■□□□□ 0.65
USP35-204ENST00000530267 USHBP1Q8N6Y0 703 aa19.13■□□□□ 0.65
USP35-204ENST00000530267 XPCQ01831 940 aaPredicted RBP19.12■□□□□ 0.65
USP35-204ENST00000530267 IGSF1Q8N6C5 1336 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms