RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	MON2	Q7Z3U7	1717 aa		29.46	■■■□□ 2.31
GSDMD-208	ENST00000528475	SIRT1	Q96EB6	747 aa		29.45	■■■□□ 2.31
GSDMD-208	ENST00000528475	ZBTB7B	O15156	539 aa	Predicted RBP	29.44	■■■□□ 2.3
GSDMD-208	ENST00000528475	FBLN1	P23142	703 aa		29.44	■■■□□ 2.3
GSDMD-208	ENST00000528475	CHD1L	Q86WJ1	897 aa		29.44	■■■□□ 2.3
GSDMD-208	ENST00000528475	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	29.44	■■■□□ 2.3
GSDMD-208	ENST00000528475	EMILIN1	Q9Y6C2	1016 aa		29.43	■■■□□ 2.3
GSDMD-208	ENST00000528475	HMOX1	P09601	288 aa		29.43	■■■□□ 2.3
GSDMD-208	ENST00000528475	LMOD3	Q0VAK6	560 aa		29.43	■■■□□ 2.3
GSDMD-208	ENST00000528475	GCC1	Q96CN9	775 aa		29.43	■■■□□ 2.3
GSDMD-208	ENST00000528475	TECPR2	O15040	1411 aa		29.42	■■■□□ 2.3
GSDMD-208	ENST00000528475	RBM25	P49756	843 aa	Known RBP	29.41	■■■□□ 2.3
GSDMD-208	ENST00000528475	ABCC4	O15439	1325 aa		29.4	■■■□□ 2.3
GSDMD-208	ENST00000528475	NME9	Q86XW9	330 aa		29.4	■■■□□ 2.3
GSDMD-208	ENST00000528475	AKAP12	Q02952	1782 aa		29.4	■■■□□ 2.3
GSDMD-208	ENST00000528475	BMP2KL	Q5H9B9	411 aa		29.39	■■■□□ 2.3
GSDMD-208	ENST00000528475	C3	P01024	1663 aa		29.39	■■■□□ 2.29
GSDMD-208	ENST00000528475	LNPK	Q9C0E8	428 aa		29.38	■■■□□ 2.29
GSDMD-208	ENST00000528475	MBIP	Q9NS73	344 aa		29.38	■■■□□ 2.29
GSDMD-208	ENST00000528475	CHMP5	Q9NZZ3	219 aa		29.38	■■■□□ 2.29
GSDMD-208	ENST00000528475	MET	P08581	1390 aa		29.38	■■■□□ 2.29
GSDMD-208	ENST00000528475	CFAP44	Q96MT7	982 aa		29.38	■■■□□ 2.29
GSDMD-208	ENST00000528475	DLG5	Q8TDM6	1919 aa		29.38	■■■□□ 2.29
GSDMD-208	ENST00000528475	CPS1	P31327	1500 aa		29.37	■■■□□ 2.29
GSDMD-208	ENST00000528475	TSPYL6	Q8N831	410 aa		29.37	■■■□□ 2.29
GSDMD-208	ENST00000528475	THUMPD2	Q9BTF0	503 aa	Known RBP	29.37	■■■□□ 2.29
GSDMD-208	ENST00000528475	NUDT16	Q96DE0	195 aa	Known RBP	29.36	■■■□□ 2.29
GSDMD-208	ENST00000528475	COG3	Q96JB2	828 aa		29.36	■■■□□ 2.29
GSDMD-208	ENST00000528475	CCDC61	Q9Y6R9	512 aa		29.36	■■■□□ 2.29
GSDMD-208	ENST00000528475	KIF24	Q5T7B8	1368 aa		29.35	■■■□□ 2.29
GSDMD-208	ENST00000528475	RTN4	Q9NQC3	1192 aa	Known RBP	29.35	■■■□□ 2.29
GSDMD-208	ENST00000528475	NCOA3	Q9Y6Q9	1424 aa		29.35	■■■□□ 2.29
GSDMD-208	ENST00000528475	NRK	Q7Z2Y5	1582 aa		29.35	■■■□□ 2.29
GSDMD-208	ENST00000528475	SNX21	Q969T3	373 aa		29.35	■■■□□ 2.29
GSDMD-208	ENST00000528475	ESF1	Q9H501	851 aa	Known RBP	29.35	■■■□□ 2.29
GSDMD-208	ENST00000528475	ITSN1	Q15811	1721 aa		29.34	■■■□□ 2.29
GSDMD-208	ENST00000528475	HSCB	Q8IWL3	235 aa		29.34	■■■□□ 2.29
GSDMD-208	ENST00000528475	TWISTNB	Q3B726	338 aa	Predicted RBP	29.33	■■■□□ 2.29
GSDMD-208	ENST00000528475	MCM4	P33991	863 aa		29.32	■■■□□ 2.28
GSDMD-208	ENST00000528475	ZNF692	Q9BU19	519 aa	Predicted RBP	29.32	■■■□□ 2.28
GSDMD-208	ENST00000528475	API5	Q9BZZ5	524 aa	Known RBP	29.32	■■■□□ 2.28
GSDMD-208	ENST00000528475	ZRANB1	Q9UGI0	708 aa		29.32	■■■□□ 2.28
GSDMD-208	ENST00000528475	L1TD1	Q5T7N2	865 aa	Known RBP	29.3	■■■□□ 2.28
GSDMD-208	ENST00000528475	ANKRD45	Q5TZF3	282 aa		29.3	■■■□□ 2.28
GSDMD-208	ENST00000528475	TXNDC2	Q86VQ3	553 aa		29.3	■■■□□ 2.28
GSDMD-208	ENST00000528475	HDGF	P51858	240 aa	Known RBP	29.29	■■■□□ 2.28
GSDMD-208	ENST00000528475	SIRT2	Q8IXJ6	389 aa		29.28	■■■□□ 2.28
GSDMD-208	ENST00000528475	C8orf58	Q8NAV2	365 aa		29.28	■■■□□ 2.28
GSDMD-208	ENST00000528475	DDIT3	P35638	169 aa		29.27	■■■□□ 2.28
GSDMD-208	ENST00000528475	SPRYD3	Q8NCJ5	442 aa		29.26	■■■□□ 2.27
GSDMD-208	ENST00000528475	RRS1	Q15050	365 aa	Known RBP	29.25	■■■□□ 2.27
GSDMD-208	ENST00000528475	C1orf115	Q9H7X2	142 aa		29.25	■■■□□ 2.27
GSDMD-208	ENST00000528475	ELL2	O00472	640 aa	Predicted RBP	29.24	■■■□□ 2.27
GSDMD-208	ENST00000528475	PRR36	Q9H6K5	1346 aa		29.23	■■■□□ 2.27
GSDMD-208	ENST00000528475	NCKAP5L	Q9HCH0	1330 aa		29.22	■■■□□ 2.27
GSDMD-208	ENST00000528475	HAP1	P54257	671 aa	Predicted RBP	29.22	■■■□□ 2.27
GSDMD-208	ENST00000528475	CIZ1	Q9ULV3	898 aa	Predicted RBP	29.21	■■■□□ 2.27
GSDMD-208	ENST00000528475	TOPAZ1	Q8N9V7	1692 aa		29.2	■■■□□ 2.26
GSDMD-208	ENST00000528475	FAM83G	A6ND36	823 aa		29.2	■■■□□ 2.26
GSDMD-208	ENST00000528475	TRH	P20396	242 aa	Predicted RBP	29.2	■■■□□ 2.26
GSDMD-208	ENST00000528475	INTS3	Q68E01	1043 aa	Known RBP	29.19	■■■□□ 2.26
GSDMD-208	ENST00000528475	FAM43A	Q8N2R8	423 aa		29.19	■■■□□ 2.26
GSDMD-208	ENST00000528475	KIF2C	Q99661	725 aa		29.19	■■■□□ 2.26
GSDMD-208	ENST00000528475	EIF5B	O60841	1220 aa	Known RBP	29.19	■■■□□ 2.26
GSDMD-208	ENST00000528475	TBC1D9	Q6ZT07	1266 aa		29.18	■■■□□ 2.26
GSDMD-208	ENST00000528475	OVOS2	A0A0J9YW53	1432 aa		29.18	■■■□□ 2.26
GSDMD-208	ENST00000528475	OVOS2	Q6IE36	1432 aa		29.18	■■■□□ 2.26
GSDMD-208	ENST00000528475	FSD2	A1L4K1	749 aa		29.17	■■■□□ 2.26
GSDMD-208	ENST00000528475	DDX11L8	A8MPP1	907 aa		29.17	■■■□□ 2.26
GSDMD-208	ENST00000528475	EIF4A2	Q14240	407 aa	Known RBP	29.17	■■■□□ 2.26
GSDMD-208	ENST00000528475	KIAA0232	Q92628	1395 aa		29.17	■■■□□ 2.26
GSDMD-208	ENST00000528475	UBR1	Q8IWV7	1749 aa		29.16	■■■□□ 2.26
GSDMD-208	ENST00000528475	NALCN	Q8IZF0	1738 aa		29.16	■■■□□ 2.26
GSDMD-208	ENST00000528475	TNR	Q92752	1358 aa		29.16	■■■□□ 2.26
GSDMD-208	ENST00000528475	TMEM2	Q9UHN6	1383 aa		29.16	■■■□□ 2.26
GSDMD-208	ENST00000528475	DCTPP1	Q9H773	170 aa		29.16	■■■□□ 2.26
GSDMD-208	ENST00000528475	TTC21B	Q7Z4L5	1316 aa		29.16	■■■□□ 2.26
GSDMD-208	ENST00000528475	RGPD1	P0DJD0	1748 aa		29.15	■■■□□ 2.26
GSDMD-208	ENST00000528475	DCTN1	Q14203	1278 aa		29.15	■■■□□ 2.26
GSDMD-208	ENST00000528475	ROBO2	Q9HCK4	1378 aa		29.15	■■■□□ 2.26
GSDMD-208	ENST00000528475	CHL1	O00533	1208 aa		29.14	■■■□□ 2.26
GSDMD-208	ENST00000528475	TRAK2	O60296	914 aa		29.14	■■■□□ 2.26
GSDMD-208	ENST00000528475	CDC45	O75419	566 aa		29.14	■■■□□ 2.26
GSDMD-208	ENST00000528475	RGS12	O14924	1447 aa		29.14	■■■□□ 2.26
GSDMD-208	ENST00000528475	ADAMTS13	Q76LX8	1427 aa		29.13	■■■□□ 2.25
GSDMD-208	ENST00000528475	PLEKHG3	A1L390	1219 aa		29.13	■■■□□ 2.25
GSDMD-208	ENST00000528475	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	29.13	■■■□□ 2.25
GSDMD-208	ENST00000528475	SULT6B1	Q6IMI4	303 aa		29.12	■■■□□ 2.25
GSDMD-208	ENST00000528475	GOLGA6L3	A6NEY3	463 aa		29.11	■■■□□ 2.25
GSDMD-208	ENST00000528475	HSP90AB1	P08238	724 aa	Known RBP	29.11	■■■□□ 2.25
GSDMD-208	ENST00000528475	USP31	Q70CQ4	1352 aa		29.11	■■■□□ 2.25
GSDMD-208	ENST00000528475	AEBP1	Q8IUX7	1158 aa		29.11	■■■□□ 2.25
GSDMD-208	ENST00000528475	ANKRD44	Q8N8A2	993 aa		29.11	■■■□□ 2.25
GSDMD-208	ENST00000528475	ATP10D	Q9P241	1426 aa		29.11	■■■□□ 2.25
GSDMD-208	ENST00000528475	PLEKHM2	Q8IWE5	1019 aa		29.1	■■■□□ 2.25
GSDMD-208	ENST00000528475	RPAP2	Q8IXW5	612 aa	Predicted RBP	29.09	■■■□□ 2.25
GSDMD-208	ENST00000528475	USP6	P35125	1406 aa		29.09	■■■□□ 2.25
GSDMD-208	ENST00000528475	PEAK1	Q9H792	1746 aa		29.09	■■■□□ 2.25
GSDMD-208	ENST00000528475	PTPRC	P08575	1304 aa		29.09	■■■□□ 2.25
GSDMD-208	ENST00000528475	ACE	P12821	1306 aa		29.08	■■■□□ 2.25

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms