RNA–Protein interactions for RNA: ENST00000528276.1

CHEK1-210, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 1,814 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-210ENST00000528276 MSH6P52701 1360 aa18.44■□□□□ 0.54
CHEK1-210ENST00000528276 CALD1Q05682 793 aaKnown RBP18.44■□□□□ 0.54
CHEK1-210ENST00000528276 LMOD3Q0VAK6 560 aa18.43■□□□□ 0.54
CHEK1-210ENST00000528276 TRIM35Q9UPQ4 493 aa18.43■□□□□ 0.54
CHEK1-210ENST00000528276 LRRC7Q96NW7 1537 aa18.43■□□□□ 0.54
CHEK1-210ENST00000528276 C1orf167Q5SNV9 1468 aa18.43■□□□□ 0.54
CHEK1-210ENST00000528276 KIF24Q5T7B8 1368 aa18.42■□□□□ 0.54
CHEK1-210ENST00000528276 PLIN1O60240 522 aa18.42■□□□□ 0.54
CHEK1-210ENST00000528276 XPCQ01831 940 aaPredicted RBP18.42■□□□□ 0.54
CHEK1-210ENST00000528276 KRT28Q7Z3Y7 464 aa18.42■□□□□ 0.54
CHEK1-210ENST00000528276 PHACTR3Q96KR7 559 aa18.42■□□□□ 0.54
CHEK1-210ENST00000528276 DCCP43146 1447 aa18.42■□□□□ 0.54
CHEK1-210ENST00000528276 PIK3C2AO00443 1686 aa18.42■□□□□ 0.54
CHEK1-210ENST00000528276 IL16Q14005 1332 aa18.42■□□□□ 0.54
CHEK1-210ENST00000528276 CCDC136Q96JN2 1154 aa18.42■□□□□ 0.54
CHEK1-210ENST00000528276 B4GALNT3Q6L9W6 998 aa18.41■□□□□ 0.54
CHEK1-210ENST00000528276 CANXP27824 592 aaKnown RBP18.4■□□□□ 0.54
CHEK1-210ENST00000528276 ZBTB7CA1YPR0 619 aa18.39■□□□□ 0.53
CHEK1-210ENST00000528276 HOXC9P31274 260 aa18.39■□□□□ 0.53
CHEK1-210ENST00000528276 PLEKHG5O94827 1062 aa18.37■□□□□ 0.53
CHEK1-210ENST00000528276 AEBP1Q8IUX7 1158 aa18.37■□□□□ 0.53
CHEK1-210ENST00000528276 EXOC6Q8TAG9 804 aa18.37■□□□□ 0.53
CHEK1-210ENST00000528276 LAS1LQ9Y4W2 734 aaKnown RBP18.37■□□□□ 0.53
CHEK1-210ENST00000528276 ARHGEF10O15013 1369 aa18.37■□□□□ 0.53
CHEK1-210ENST00000528276 CT47B1P0C2W7 299 aaPredicted RBP18.37■□□□□ 0.53
CHEK1-210ENST00000528276 FANCIQ9NVI1 1328 aa18.37■□□□□ 0.53
CHEK1-210ENST00000528276 MST1RQ04912 1400 aa18.37■□□□□ 0.53
CHEK1-210ENST00000528276 TSR2Q969E8 191 aaKnown RBP18.36■□□□□ 0.53
CHEK1-210ENST00000528276 LTV1Q96GA3 475 aaPredicted RBP18.36■□□□□ 0.53
CHEK1-210ENST00000528276 RTL1A6NKG5 1358 aa18.36■□□□□ 0.53
CHEK1-210ENST00000528276 BCAR3O75815 825 aa18.35■□□□□ 0.53
CHEK1-210ENST00000528276 NPHP3Q7Z494 1330 aa18.35■□□□□ 0.53
CHEK1-210ENST00000528276 KIF1AQ12756 1690 aa18.35■□□□□ 0.53
CHEK1-210ENST00000528276 GCP02774 474 aa18.35■□□□□ 0.53
CHEK1-210ENST00000528276 ZNF335Q9H4Z2 1342 aaPredicted RBP18.34■□□□□ 0.53
CHEK1-210ENST00000528276 GNAI1P63096 354 aa18.34■□□□□ 0.53
CHEK1-210ENST00000528276 IP6K1Q92551 441 aa18.34■□□□□ 0.53
CHEK1-210ENST00000528276 EYA1Q99502 592 aa18.34■□□□□ 0.53
CHEK1-210ENST00000528276 PEAK1Q9H792 1746 aa18.34■□□□□ 0.53
CHEK1-210ENST00000528276 CRBNQ96SW2 442 aa18.33■□□□□ 0.53
CHEK1-210ENST00000528276 RARSP54136 660 aaKnown RBP18.33■□□□□ 0.52
CHEK1-210ENST00000528276 EXOSC9Q06265 439 aaKnown RBP18.33■□□□□ 0.52
CHEK1-210ENST00000528276 IGSF1Q8N6C5 1336 aa18.32■□□□□ 0.52
CHEK1-210ENST00000528276 FRAT1Q92837 279 aaPredicted RBP18.32■□□□□ 0.52
CHEK1-210ENST00000528276 RTF1Q92541 710 aaKnown RBP18.31■□□□□ 0.52
CHEK1-210ENST00000528276 IFT57Q9NWB7 429 aa18.31■□□□□ 0.52
CHEK1-210ENST00000528276 STRCP1A6NGW2 1772 aa18.31■□□□□ 0.52
CHEK1-210ENST00000528276 USP54Q70EL1 1684 aa18.3■□□□□ 0.52
CHEK1-210ENST00000528276 C20orf194Q5TEA3 1177 aa18.3■□□□□ 0.52
CHEK1-210ENST00000528276 THUMPD2Q9BTF0 503 aaKnown RBP18.3■□□□□ 0.52
CHEK1-210ENST00000528276 STRCQ7RTU9 1775 aa18.29■□□□□ 0.52
CHEK1-210ENST00000528276 GAS2L2Q8NHY3 880 aa18.29■□□□□ 0.52
CHEK1-210ENST00000528276 DDX17Q92841 729 aaKnown RBP18.28■□□□□ 0.52
CHEK1-210ENST00000528276 KDRP35968 1356 aa18.28■□□□□ 0.52
CHEK1-210ENST00000528276 PDE3AQ14432 1141 aa18.28■□□□□ 0.52
CHEK1-210ENST00000528276 ARHGEF25Q86VW2 580 aa18.28■□□□□ 0.52
CHEK1-210ENST00000528276 CFAP44Q96MT7 982 aa18.28■□□□□ 0.52
CHEK1-210ENST00000528276 SLAIN2Q9P270 581 aa18.28■□□□□ 0.52
CHEK1-210ENST00000528276 USP19O94966 1318 aa18.27■□□□□ 0.52
CHEK1-210ENST00000528276 FAM83GA6ND36 823 aa18.27■□□□□ 0.52
CHEK1-210ENST00000528276 BCL2L13Q9BXK5 485 aa18.27■□□□□ 0.52
CHEK1-210ENST00000528276 SMC4Q9NTJ3 1288 aa18.27■□□□□ 0.52
CHEK1-210ENST00000528276 NFAT5O94916 1531 aa18.26■□□□□ 0.51
CHEK1-210ENST00000528276 DCTN1Q14203 1278 aa18.26■□□□□ 0.51
CHEK1-210ENST00000528276 MTHFSDQ2M296 383 aaKnown RBP18.26■□□□□ 0.51
CHEK1-210ENST00000528276 BRINP3Q76B58 766 aa18.26■□□□□ 0.51
CHEK1-210ENST00000528276 MS4A1P11836 297 aa18.25■□□□□ 0.51
CHEK1-210ENST00000528276 ZNF428Q96B54 188 aa18.25■□□□□ 0.51
CHEK1-210ENST00000528276 MARF1Q9Y4F3 1742 aaKnown RBP18.24■□□□□ 0.51
CHEK1-210ENST00000528276 ZC3H6P61129 1189 aaKnown RBP18.24■□□□□ 0.51
CHEK1-210ENST00000528276 SLIT3O75094 1523 aa18.24■□□□□ 0.51
CHEK1-210ENST00000528276 MCM10Q7L590 875 aa18.23■□□□□ 0.51
CHEK1-210ENST00000528276 MBIPQ9NS73 344 aa18.23■□□□□ 0.51
CHEK1-210ENST00000528276 RGPD1P0DJD0 1748 aa18.23■□□□□ 0.51
CHEK1-210ENST00000528276 ZKSCAN2Q63HK3 967 aa18.23■□□□□ 0.51
CHEK1-210ENST00000528276 USHBP1Q8N6Y0 703 aa18.23■□□□□ 0.51
CHEK1-210ENST00000528276 TNS3Q68CZ2 1445 aa18.22■□□□□ 0.51
CHEK1-210ENST00000528276 HTATSF1O43719 755 aaKnown RBP18.22■□□□□ 0.51
CHEK1-210ENST00000528276 ZNF853P0CG23 659 aa18.22■□□□□ 0.51
CHEK1-210ENST00000528276 HAP1P54257 671 aaPredicted RBP18.22■□□□□ 0.51
CHEK1-210ENST00000528276 FTSJ3Q8IY81 847 aaKnown RBP18.22■□□□□ 0.51
CHEK1-210ENST00000528276 ANKRD24Q8TF21 1146 aa18.22■□□□□ 0.51
CHEK1-210ENST00000528276 ALDH1L2Q3SY69 923 aa18.21■□□□□ 0.51
CHEK1-210ENST00000528276 NBPF6Q5VWK0 638 aa18.21■□□□□ 0.51
CHEK1-210ENST00000528276 NBPF4Q96M43 638 aa18.21■□□□□ 0.51
CHEK1-210ENST00000528276 TRPM3Q9HCF6 1732 aaPredicted RBP18.21■□□□□ 0.51
CHEK1-210ENST00000528276 SPATA31A3Q5VYP0 1347 aa18.21■□□□□ 0.51
CHEK1-210ENST00000528276 GNAT3A8MTJ3 354 aa18.21■□□□□ 0.51
CHEK1-210ENST00000528276 IPO8O15397 1037 aaKnown RBP18.21■□□□□ 0.51
CHEK1-210ENST00000528276 SSH1Q8WYL5 1049 aa18.21■□□□□ 0.51
CHEK1-210ENST00000528276 PANK1Q8TE04 598 aa18.2■□□□□ 0.5
CHEK1-210ENST00000528276 KIF16BQ96L93 1317 aa18.2■□□□□ 0.5
CHEK1-210ENST00000528276 COG6Q9Y2V7 657 aa18.19■□□□□ 0.5
CHEK1-210ENST00000528276 ELL2O00472 640 aaPredicted RBP18.19■□□□□ 0.5
CHEK1-210ENST00000528276 TWISTNBQ3B726 338 aaPredicted RBP18.19■□□□□ 0.5
CHEK1-210ENST00000528276 LRRC59Q96AG4 307 aaKnown RBP18.19■□□□□ 0.5
CHEK1-210ENST00000528276 LTN1O94822 1766 aa18.18■□□□□ 0.5
CHEK1-210ENST00000528276 CABLES1Q8TDN4 633 aa18.18■□□□□ 0.5
CHEK1-210ENST00000528276 DZIP1LQ8IYY4 767 aaKnown RBP18.17■□□□□ 0.5
CHEK1-210ENST00000528276 CLUAP1Q96AJ1 413 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms