RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 NUTM2GQ5VZR2 741 aa21.03■□□□□ 0.96
SNRNP35-204ENST00000527158 PHACTR3Q96KR7 559 aa21.03■□□□□ 0.96
SNRNP35-204ENST00000527158 FLT4P35916 1363 aa21.03■□□□□ 0.96
SNRNP35-204ENST00000527158 ORAI2Q96SN7 254 aa21.01■□□□□ 0.95
SNRNP35-204ENST00000527158 SULT6B1Q6IMI4 303 aa21■□□□□ 0.95
SNRNP35-204ENST00000527158 PEAK1Q9H792 1746 aa21■□□□□ 0.95
SNRNP35-204ENST00000527158 NCOA3Q9Y6Q9 1424 aa21■□□□□ 0.95
SNRNP35-204ENST00000527158 BCAR3O75815 825 aa20.99■□□□□ 0.95
SNRNP35-204ENST00000527158 ATF3P18847 181 aa20.99■□□□□ 0.95
SNRNP35-204ENST00000527158 TMEM94Q12767 1356 aa20.99■□□□□ 0.95
SNRNP35-204ENST00000527158 KIF24Q5T7B8 1368 aa20.99■□□□□ 0.95
SNRNP35-204ENST00000527158 CALD1Q05682 793 aaKnown RBP20.99■□□□□ 0.95
SNRNP35-204ENST00000527158 USP54Q70EL1 1684 aa20.98■□□□□ 0.95
SNRNP35-204ENST00000527158 FOXO3O43524 673 aa20.98■□□□□ 0.95
SNRNP35-204ENST00000527158 LMOD3Q0VAK6 560 aa20.98■□□□□ 0.95
SNRNP35-204ENST00000527158 CRBNQ96SW2 442 aa20.98■□□□□ 0.95
SNRNP35-204ENST00000527158 CT47B1P0C2W7 299 aaPredicted RBP20.97■□□□□ 0.95
SNRNP35-204ENST00000527158 C20orf194Q5TEA3 1177 aa20.97■□□□□ 0.95
SNRNP35-204ENST00000527158 LMTK3Q96Q04 1460 aa20.96■□□□□ 0.95
SNRNP35-204ENST00000527158 C1orf167Q5SNV9 1468 aa20.96■□□□□ 0.95
SNRNP35-204ENST00000527158 RARSP54136 660 aaKnown RBP20.96■□□□□ 0.95
SNRNP35-204ENST00000527158 TSR2Q969E8 191 aaKnown RBP20.96■□□□□ 0.95
SNRNP35-204ENST00000527158 AEBP1Q8IUX7 1158 aa20.95■□□□□ 0.94
SNRNP35-204ENST00000527158 KCNH5Q8NCM2 988 aa20.95■□□□□ 0.94
SNRNP35-204ENST00000527158 ARHGEF10O15013 1369 aa20.94■□□□□ 0.94
SNRNP35-204ENST00000527158 DCCP43146 1447 aa20.94■□□□□ 0.94
SNRNP35-204ENST00000527158 CANXP27824 592 aaKnown RBP20.94■□□□□ 0.94
SNRNP35-204ENST00000527158 HOXC9P31274 260 aa20.93■□□□□ 0.94
SNRNP35-204ENST00000527158 MARF1Q9Y4F3 1742 aaKnown RBP20.93■□□□□ 0.94
SNRNP35-204ENST00000527158 EXOSC9Q06265 439 aaKnown RBP20.92■□□□□ 0.94
SNRNP35-204ENST00000527158 CADPS2Q86UW7 1296 aa20.92■□□□□ 0.94
SNRNP35-204ENST00000527158 KRT28Q7Z3Y7 464 aa20.92■□□□□ 0.94
SNRNP35-204ENST00000527158 STRCP1A6NGW2 1772 aa20.92■□□□□ 0.94
SNRNP35-204ENST00000527158 RGPD1P0DJD0 1748 aa20.91■□□□□ 0.94
SNRNP35-204ENST00000527158 XPCQ01831 940 aaPredicted RBP20.91■□□□□ 0.94
SNRNP35-204ENST00000527158 KIF1AQ12756 1690 aa20.91■□□□□ 0.94
SNRNP35-204ENST00000527158 RTL1A6NKG5 1358 aa20.91■□□□□ 0.94
SNRNP35-204ENST00000527158 PDE3AQ14432 1141 aa20.9■□□□□ 0.94
SNRNP35-204ENST00000527158 LAS1LQ9Y4W2 734 aaKnown RBP20.9■□□□□ 0.94
SNRNP35-204ENST00000527158 GNAI1P63096 354 aa20.89■□□□□ 0.94
SNRNP35-204ENST00000527158 EYA1Q99502 592 aa20.89■□□□□ 0.94
SNRNP35-204ENST00000527158 MST1RQ04912 1400 aa20.89■□□□□ 0.93
SNRNP35-204ENST00000527158 MSH6P52701 1360 aa20.89■□□□□ 0.93
SNRNP35-204ENST00000527158 IGSF1Q8N6C5 1336 aa20.89■□□□□ 0.93
SNRNP35-204ENST00000527158 LMOD2Q6P5Q4 547 aa20.89■□□□□ 0.93
SNRNP35-204ENST00000527158 FRAT1Q92837 279 aaPredicted RBP20.89■□□□□ 0.93
SNRNP35-204ENST00000527158 IFT57Q9NWB7 429 aa20.89■□□□□ 0.93
SNRNP35-204ENST00000527158 ERICH6Q7L0X2 663 aa20.88■□□□□ 0.93
SNRNP35-204ENST00000527158 THUMPD2Q9BTF0 503 aaKnown RBP20.87■□□□□ 0.93
SNRNP35-204ENST00000527158 KDRP35968 1356 aa20.87■□□□□ 0.93
SNRNP35-204ENST00000527158 IP6K1Q92551 441 aa20.87■□□□□ 0.93
SNRNP35-204ENST00000527158 MSH5O43196 834 aa20.86■□□□□ 0.93
SNRNP35-204ENST00000527158 BCL2L13Q9BXK5 485 aa20.86■□□□□ 0.93
SNRNP35-204ENST00000527158 STRCQ7RTU9 1775 aa20.86■□□□□ 0.93
SNRNP35-204ENST00000527158 NFAT5O94916 1531 aa20.85■□□□□ 0.93
SNRNP35-204ENST00000527158 GCP02774 474 aa20.85■□□□□ 0.93
SNRNP35-204ENST00000527158 LTV1Q96GA3 475 aaPredicted RBP20.85■□□□□ 0.93
SNRNP35-204ENST00000527158 CFAP44Q96MT7 982 aa20.85■□□□□ 0.93
SNRNP35-204ENST00000527158 FAM83GA6ND36 823 aa20.84■□□□□ 0.93
SNRNP35-204ENST00000527158 ZNF853P0CG23 659 aa20.84■□□□□ 0.93
SNRNP35-204ENST00000527158 SMC4Q9NTJ3 1288 aa20.83■□□□□ 0.93
SNRNP35-204ENST00000527158 ZNF428Q96B54 188 aa20.83■□□□□ 0.92
SNRNP35-204ENST00000527158 DLG5Q8TDM6 1919 aa20.82■□□□□ 0.92
SNRNP35-204ENST00000527158 ZBTB7CA1YPR0 619 aa20.82■□□□□ 0.92
SNRNP35-204ENST00000527158 DCTN1Q14203 1278 aa20.82■□□□□ 0.92
SNRNP35-204ENST00000527158 GAS2L2Q8NHY3 880 aa20.82■□□□□ 0.92
SNRNP35-204ENST00000527158 TRPM3Q9HCF6 1732 aaPredicted RBP20.81■□□□□ 0.92
SNRNP35-204ENST00000527158 USP19O94966 1318 aa20.81■□□□□ 0.92
SNRNP35-204ENST00000527158 NPHP3Q7Z494 1330 aa20.81■□□□□ 0.92
SNRNP35-204ENST00000527158 LTN1O94822 1766 aa20.81■□□□□ 0.92
SNRNP35-204ENST00000527158 MBIPQ9NS73 344 aa20.81■□□□□ 0.92
SNRNP35-204ENST00000527158 SLIT3O75094 1523 aa20.81■□□□□ 0.92
SNRNP35-204ENST00000527158 MS4A1P11836 297 aa20.8■□□□□ 0.92
SNRNP35-204ENST00000527158 MTHFSDQ2M296 383 aaKnown RBP20.8■□□□□ 0.92
SNRNP35-204ENST00000527158 ZKSCAN2Q63HK3 967 aa20.8■□□□□ 0.92
SNRNP35-204ENST00000527158 PANK1Q8TE04 598 aa20.8■□□□□ 0.92
SNRNP35-204ENST00000527158 SSH1Q8WYL5 1049 aa20.8■□□□□ 0.92
SNRNP35-204ENST00000527158 ALDH1L2Q3SY69 923 aa20.8■□□□□ 0.92
SNRNP35-204ENST00000527158 ARHGEF25Q86VW2 580 aa20.8■□□□□ 0.92
SNRNP35-204ENST00000527158 RTF1Q92541 710 aaKnown RBP20.8■□□□□ 0.92
SNRNP35-204ENST00000527158 PLEKHG5O94827 1062 aa20.79■□□□□ 0.92
SNRNP35-204ENST00000527158 COG6Q9Y2V7 657 aa20.79■□□□□ 0.92
SNRNP35-204ENST00000527158 ZNF335Q9H4Z2 1342 aaPredicted RBP20.79■□□□□ 0.92
SNRNP35-204ENST00000527158 MCM10Q7L590 875 aa20.78■□□□□ 0.92
SNRNP35-204ENST00000527158 AAMPQ13685 434 aa20.77■□□□□ 0.92
SNRNP35-204ENST00000527158 PHRF1Q9P1Y6 1649 aaKnown RBP20.77■□□□□ 0.91
SNRNP35-204ENST00000527158 DDX17Q92841 729 aaKnown RBP20.76■□□□□ 0.91
SNRNP35-204ENST00000527158 KIF16BQ96L93 1317 aa20.76■□□□□ 0.91
SNRNP35-204ENST00000527158 IPO8O15397 1037 aaKnown RBP20.76■□□□□ 0.91
SNRNP35-204ENST00000527158 HTATSF1O43719 755 aaKnown RBP20.76■□□□□ 0.91
SNRNP35-204ENST00000527158 VAMP4O75379 141 aa20.76■□□□□ 0.91
SNRNP35-204ENST00000527158 FTSJ3Q8IY81 847 aaKnown RBP20.76■□□□□ 0.91
SNRNP35-204ENST00000527158 DZIP1LQ8IYY4 767 aaKnown RBP20.75■□□□□ 0.91
SNRNP35-204ENST00000527158 CHL1O00533 1208 aa20.74■□□□□ 0.91
SNRNP35-204ENST00000527158 TWISTNBQ3B726 338 aaPredicted RBP20.74■□□□□ 0.91
SNRNP35-204ENST00000527158 CLUAP1Q96AJ1 413 aa20.74■□□□□ 0.91
SNRNP35-204ENST00000527158 ALS2Q96Q42 1657 aa20.74■□□□□ 0.91
SNRNP35-204ENST00000527158 XIRP1Q702N8 1843 aaKnown RBP20.74■□□□□ 0.91
SNRNP35-204ENST00000527158 NBPF6Q5VWK0 638 aa20.73■□□□□ 0.91
SNRNP35-204ENST00000527158 CENPQQ7L2Z9 268 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms